RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 GOLGA8HP0CJ92 632 aa18.68■□□□□ 0.58
CLIP4-201ENST00000320081 AMPD3Q01432 767 aa18.68■□□□□ 0.58
CLIP4-201ENST00000320081 CUL4AQ13619 759 aa18.68■□□□□ 0.58
CLIP4-201ENST00000320081 CTR9Q6PD62 1173 aa18.68■□□□□ 0.58
CLIP4-201ENST00000320081 CTAGE6Q86UF2 777 aa18.68■□□□□ 0.58
CLIP4-201ENST00000320081 CTAGE4Q8IX94 777 aa18.68■□□□□ 0.58
CLIP4-201ENST00000320081 PUS7LQ9H0K6 701 aaKnown RBP18.68■□□□□ 0.58
CLIP4-201ENST00000320081 COPRSQ9NQ92 184 aa18.68■□□□□ 0.58
CLIP4-201ENST00000320081 HIBADHP31937 336 aaKnown RBP18.68■□□□□ 0.58
CLIP4-201ENST00000320081 ZYXQ15942 572 aaKnown RBP18.68■□□□□ 0.58
CLIP4-201ENST00000320081 DYMQ7RTS9 669 aa18.68■□□□□ 0.58
CLIP4-201ENST00000320081 SYCP3Q8IZU3 236 aa18.68■□□□□ 0.58
CLIP4-201ENST00000320081 PLCD4Q9BRC7 762 aa18.68■□□□□ 0.58
CLIP4-201ENST00000320081 RGS12O14924 1447 aa18.67■□□□□ 0.58
CLIP4-201ENST00000320081 PPP1R12BO60237 982 aaPredicted RBP18.67■□□□□ 0.58
CLIP4-201ENST00000320081 GRAMD1CQ8IYS0 662 aa18.67■□□□□ 0.58
CLIP4-201ENST00000320081 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.67■□□□□ 0.58
CLIP4-201ENST00000320081 RILPL1Q5EBL4 403 aa18.67■□□□□ 0.58
CLIP4-201ENST00000320081 C11orf57Q6ZUT1 292 aaPredicted RBP18.67■□□□□ 0.58
CLIP4-201ENST00000320081 KIAA1468Q9P260 1216 aa18.67■□□□□ 0.58
CLIP4-201ENST00000320081 ERLIN2O94905 339 aa18.67■□□□□ 0.58
CLIP4-201ENST00000320081 TEX11Q8IYF3 940 aa18.67■□□□□ 0.58
CLIP4-201ENST00000320081 CCDC42Q96M95 316 aa18.67■□□□□ 0.58
CLIP4-201ENST00000320081 LLPHQ9BRT6 129 aaKnown RBP18.67■□□□□ 0.58
CLIP4-201ENST00000320081 MAST3O60307 1309 aa18.67■□□□□ 0.58
CLIP4-201ENST00000320081 CYP2D7A0A087X1C5 515 aa18.66■□□□□ 0.58
CLIP4-201ENST00000320081 TCP10Q12799 353 aa18.66■□□□□ 0.58
CLIP4-201ENST00000320081 PTPROQ16827 1216 aa18.66■□□□□ 0.58
CLIP4-201ENST00000320081 DPCR1Q3MIW9 517 aa18.66■□□□□ 0.58
CLIP4-201ENST00000320081 IQCEQ6IPM2 695 aa18.66■□□□□ 0.58
CLIP4-201ENST00000320081 ZNF215Q9UL58 517 aaPredicted RBP18.66■□□□□ 0.58
CLIP4-201ENST00000320081 MAATS1Q7Z4T9 603 aa18.66■□□□□ 0.58
CLIP4-201ENST00000320081 FCHSD1Q86WN1 690 aa18.66■□□□□ 0.58
CLIP4-201ENST00000320081 FANCLQ9NW38 375 aa18.66■□□□□ 0.58
CLIP4-201ENST00000320081 HLA-DOAP06340 250 aa18.66■□□□□ 0.58
CLIP4-201ENST00000320081 ERCC6LQ2NKX8 1250 aa18.66■□□□□ 0.58
CLIP4-201ENST00000320081 MYRIPQ8NFW9 859 aa18.66■□□□□ 0.58
CLIP4-201ENST00000320081 TMEM87BQ96K49 555 aa18.66■□□□□ 0.58
CLIP4-201ENST00000320081 GBP3Q9H0R5 595 aa18.66■□□□□ 0.58
CLIP4-201ENST00000320081 MRVI1Q9Y6F6 885 aa18.66■□□□□ 0.58
CLIP4-201ENST00000320081 CDC42BPAQ5VT25 1732 aa18.66■□□□□ 0.58
CLIP4-201ENST00000320081 PLXNC1O60486 1568 aa18.66■□□□□ 0.58
CLIP4-201ENST00000320081 M0R2C6 588 aa18.66■□□□□ 0.58
CLIP4-201ENST00000320081 UFL1O94874 794 aa18.66■□□□□ 0.58
CLIP4-201ENST00000320081 DEXIO95424 95 aa18.66■□□□□ 0.58
CLIP4-201ENST00000320081 SF3A3Q12874 501 aaKnown RBP eCLIP18.66■□□□□ 0.58
CLIP4-201ENST00000320081 SMYD4Q8IYR2 804 aaPredicted RBP18.66■□□□□ 0.58
CLIP4-201ENST00000320081 FNBP4Q8N3X1 1017 aaPredicted RBP18.66■□□□□ 0.58
CLIP4-201ENST00000320081 VEZTQ9HBM0 779 aa18.66■□□□□ 0.58
CLIP4-201ENST00000320081 LUC7L2Q9Y383 392 aaKnown RBP18.66■□□□□ 0.58
CLIP4-201ENST00000320081 TFAP4Q01664 338 aa18.65■□□□□ 0.58
CLIP4-201ENST00000320081 DSCC1Q9BVC3 393 aa18.65■□□□□ 0.58
CLIP4-201ENST00000320081 CCDC94Q9BW85 323 aaPredicted RBP18.65■□□□□ 0.58
CLIP4-201ENST00000320081 GNAT2P19087 354 aa18.65■□□□□ 0.58
CLIP4-201ENST00000320081 CTSWP56202 376 aa18.65■□□□□ 0.58
CLIP4-201ENST00000320081 IFFO1Q0D2I5 559 aa18.65■□□□□ 0.58
CLIP4-201ENST00000320081 IFNL3Q8IZI9 196 aa18.65■□□□□ 0.58
CLIP4-201ENST00000320081 ZNF654Q8IZM8 581 aa18.65■□□□□ 0.58
CLIP4-201ENST00000320081 TGFBRAP1Q8WUH2 860 aa18.65■□□□□ 0.58
CLIP4-201ENST00000320081 ERBB3P21860 1342 aa18.65■□□□□ 0.58
CLIP4-201ENST00000320081 CUL5Q93034 780 aa18.65■□□□□ 0.58
CLIP4-201ENST00000320081 CYP27B1O15528 508 aa18.64■□□□□ 0.58
CLIP4-201ENST00000320081 TBC1D8BQ0IIM8 1120 aa18.64■□□□□ 0.58
CLIP4-201ENST00000320081 NR5A1Q13285 461 aa18.64■□□□□ 0.58
CLIP4-201ENST00000320081 RGS22Q8NE09 1264 aa18.64■□□□□ 0.58
CLIP4-201ENST00000320081 NSUN7Q8NE18 718 aaKnown RBP18.64■□□□□ 0.58
CLIP4-201ENST00000320081 GPKOWQ92917 476 aaPredicted RBP eCLIP18.64■□□□□ 0.58
CLIP4-201ENST00000320081 CTAGE9A4FU28 777 aa18.64■□□□□ 0.57
CLIP4-201ENST00000320081 SF3B2Q13435 895 aaKnown RBP18.64■□□□□ 0.57
CLIP4-201ENST00000320081 CACTINQ8WUQ7 758 aaKnown RBP18.64■□□□□ 0.57
CLIP4-201ENST00000320081 TTC38Q5R3I4 469 aa18.64■□□□□ 0.57
CLIP4-201ENST00000320081 CCDC122Q5T0U0 273 aa18.64■□□□□ 0.57
CLIP4-201ENST00000320081 FBXO18Q8NFZ0 1043 aa18.64■□□□□ 0.57
CLIP4-201ENST00000320081 SLF1Q9BQI6 1058 aa18.64■□□□□ 0.57
CLIP4-201ENST00000320081 PFKFB2O60825 505 aa18.63■□□□□ 0.57
CLIP4-201ENST00000320081 KRT9P35527 623 aa18.63■□□□□ 0.57
CLIP4-201ENST00000320081 RNF187Q5TA31 235 aaPredicted RBP18.63■□□□□ 0.57
CLIP4-201ENST00000320081 MYO6Q9UM54 1294 aa18.63■□□□□ 0.57
CLIP4-201ENST00000320081 CLTCL1P53675 1640 aa18.63■□□□□ 0.57
CLIP4-201ENST00000320081 KIF24Q5T7B8 1368 aa18.63■□□□□ 0.57
CLIP4-201ENST00000320081 GSTTP1A0A1W2PQM5 241 aa18.63■□□□□ 0.57
CLIP4-201ENST00000320081 PPP2R3AQ06190 1150 aa18.63■□□□□ 0.57
CLIP4-201ENST00000320081 POSTNQ15063 836 aa18.63■□□□□ 0.57
CLIP4-201ENST00000320081 NECTIN1Q15223 517 aa18.63■□□□□ 0.57
CLIP4-201ENST00000320081 RASGRP4Q8TDF6 673 aa18.63■□□□□ 0.57
CLIP4-201ENST00000320081 CNKSR2Q8WXI2 1034 aa18.63■□□□□ 0.57
CLIP4-201ENST00000320081 CCNL1Q9UK58 526 aaPredicted RBP18.63■□□□□ 0.57
CLIP4-201ENST00000320081 GOLGA6L9A6NEM1 432 aa18.63■□□□□ 0.57
CLIP4-201ENST00000320081 AKR1B15C9JRZ8 316 aaPredicted RBP18.63■□□□□ 0.57
CLIP4-201ENST00000320081 SMIM5Q71RC9 77 aa18.63■□□□□ 0.57
CLIP4-201ENST00000320081 CCDC87Q9NVE4 849 aa18.63■□□□□ 0.57
CLIP4-201ENST00000320081 PCDHA5Q9Y5H7 936 aa18.63■□□□□ 0.57
CLIP4-201ENST00000320081 PDE4DQ08499 809 aa18.63■□□□□ 0.57
CLIP4-201ENST00000320081 KRT79Q5XKE5 535 aa18.63■□□□□ 0.57
CLIP4-201ENST00000320081 MAEAQ7L5Y9 396 aa18.63■□□□□ 0.57
CLIP4-201ENST00000320081 RMND1Q9NWS8 449 aa18.63■□□□□ 0.57
CLIP4-201ENST00000320081 VPS18Q9P253 973 aa18.63■□□□□ 0.57
CLIP4-201ENST00000320081 RSPH14Q9UHP6 348 aa18.63■□□□□ 0.57
CLIP4-201ENST00000320081 CCNT1O60563 726 aaKnown RBP18.62■□□□□ 0.57
CLIP4-201ENST00000320081 ADALQ6DHV7 355 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms