RNA–Protein interactions for RNA: ENST00000317201.6

HOXA3-201, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXA3, Length 2,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-201ENST00000317201 FOXP2O15409 715 aa17.1■□□□□ 0.33
HOXA3-201ENST00000317201 GYG1P46976 350 aa17.1■□□□□ 0.33
HOXA3-201ENST00000317201 VPS37DQ86XT2 251 aa17.1■□□□□ 0.33
HOXA3-201ENST00000317201 LRRC37AA6NMS7 1700 aa17.1■□□□□ 0.33
HOXA3-201ENST00000317201 ALX1Q15699 326 aa17.09■□□□□ 0.33
HOXA3-201ENST00000317201 CAMKK2Q96RR4 588 aa17.09■□□□□ 0.33
HOXA3-201ENST00000317201 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.09■□□□□ 0.33
HOXA3-201ENST00000317201 WWC3Q9ULE0 1092 aa17.09■□□□□ 0.33
HOXA3-201ENST00000317201 JRKLQ9Y4A0 524 aa17.09■□□□□ 0.33
HOXA3-201ENST00000317201 GOLGA6L6A8MZA4 724 aa17.09■□□□□ 0.33
HOXA3-201ENST00000317201 HIBADHP31937 336 aaKnown RBP17.09■□□□□ 0.33
HOXA3-201ENST00000317201 GNAT2P19087 354 aa17.08■□□□□ 0.33
HOXA3-201ENST00000317201 IMMTQ16891 758 aaKnown RBP17.08■□□□□ 0.33
HOXA3-201ENST00000317201 FBXL16Q8N461 479 aa17.08■□□□□ 0.33
HOXA3-201ENST00000317201 ZGPATQ8N5A5 531 aaKnown RBP17.08■□□□□ 0.33
HOXA3-201ENST00000317201 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.08■□□□□ 0.33
HOXA3-201ENST00000317201 TAF6LQ9Y6J9 622 aa17.08■□□□□ 0.32
HOXA3-201ENST00000317201 COL1A1P02452 1464 aaPredicted RBP17.08■□□□□ 0.32
HOXA3-201ENST00000317201 ANKRD31Q8N7Z5 1873 aa17.07■□□□□ 0.32
HOXA3-201ENST00000317201 FBXO38Q6PIJ6 1188 aa17.07■□□□□ 0.32
HOXA3-201ENST00000317201 MAGEB6Q8N7X4 407 aa17.07■□□□□ 0.32
HOXA3-201ENST00000317201 STRBPQ96SI9 672 aaKnown RBP17.07■□□□□ 0.32
HOXA3-201ENST00000317201 FGAP02671 866 aa17.07■□□□□ 0.32
HOXA3-201ENST00000317201 CPA1P15085 419 aa17.07■□□□□ 0.32
HOXA3-201ENST00000317201 AIDAQ96BJ3 306 aa17.07■□□□□ 0.32
HOXA3-201ENST00000317201 DUOX1Q9NRD9 1551 aa17.06■□□□□ 0.32
HOXA3-201ENST00000317201 DHX32Q7L7V1 743 aaKnown RBP17.06■□□□□ 0.32
HOXA3-201ENST00000317201 CCDC112Q8NEF3 446 aa17.06■□□□□ 0.32
HOXA3-201ENST00000317201 LRP2BPQ9P2M1 347 aa17.06■□□□□ 0.32
HOXA3-201ENST00000317201 MYH13Q9UKX3 1938 aa17.06■□□□□ 0.32
HOXA3-201ENST00000317201 LAMA4Q16363 1823 aa17.06■□□□□ 0.32
HOXA3-201ENST00000317201 E7EWF7 191 aa17.06■□□□□ 0.32
HOXA3-201ENST00000317201 ATP2B4P23634 1241 aa17.06■□□□□ 0.32
HOXA3-201ENST00000317201 SATB1Q01826 763 aa17.06■□□□□ 0.32
HOXA3-201ENST00000317201 ZNF397Q8NF99 534 aaPredicted RBP17.06■□□□□ 0.32
HOXA3-201ENST00000317201 MAST2Q6P0Q8 1798 aa17.06■□□□□ 0.32
HOXA3-201ENST00000317201 STOX1Q6ZVD7 989 aa17.06■□□□□ 0.32
HOXA3-201ENST00000317201 AGXT2Q9BYV1 514 aa17.06■□□□□ 0.32
HOXA3-201ENST00000317201 ANKIB1Q9P2G1 1089 aa17.06■□□□□ 0.32
HOXA3-201ENST00000317201 PARP3Q9Y6F1 533 aa17.06■□□□□ 0.32
HOXA3-201ENST00000317201 WDR19Q8NEZ3 1342 aa17.05■□□□□ 0.32
HOXA3-201ENST00000317201 SALL1Q9NSC2 1324 aa17.05■□□□□ 0.32
HOXA3-201ENST00000317201 PDE6BP35913 854 aa17.05■□□□□ 0.32
HOXA3-201ENST00000317201 EXOSC10Q01780 885 aaKnown RBP17.05■□□□□ 0.32
HOXA3-201ENST00000317201 SEMA3FQ13275 785 aa17.05■□□□□ 0.32
HOXA3-201ENST00000317201 TOB2Q14106 344 aaPredicted RBP17.05■□□□□ 0.32
HOXA3-201ENST00000317201 SUFUQ9UMX1 484 aa17.05■□□□□ 0.32
HOXA3-201ENST00000317201 LTBP1Q14766 1721 aa17.05■□□□□ 0.32
HOXA3-201ENST00000317201 WTIPA6NIX2 430 aaPredicted RBP17.05■□□□□ 0.32
HOXA3-201ENST00000317201 TDO2P48775 406 aa17.05■□□□□ 0.32
HOXA3-201ENST00000317201 SLC15A2Q16348 729 aa17.05■□□□□ 0.32
HOXA3-201ENST00000317201 CTR9Q6PD62 1173 aa17.05■□□□□ 0.32
HOXA3-201ENST00000317201 GDPD2Q9HCC8 539 aa17.05■□□□□ 0.32
HOXA3-201ENST00000317201 CACNA1SQ13698 1873 aa17.04■□□□□ 0.32
HOXA3-201ENST00000317201 NPR1P16066 1061 aa17.04■□□□□ 0.32
HOXA3-201ENST00000317201 CXorf56Q9H5V9 222 aa17.04■□□□□ 0.32
HOXA3-201ENST00000317201 ZDHHC9Q9Y397 364 aa17.04■□□□□ 0.32
HOXA3-201ENST00000317201 KIAA1551Q9HCM1 1747 aa17.04■□□□□ 0.32
HOXA3-201ENST00000317201 ZNF213O14771 459 aa17.04■□□□□ 0.32
HOXA3-201ENST00000317201 ELF2Q15723 593 aa17.04■□□□□ 0.32
HOXA3-201ENST00000317201 NOL8Q76FK4 1167 aaKnown RBP17.04■□□□□ 0.32
HOXA3-201ENST00000317201 SP8Q8IXZ3 490 aa17.04■□□□□ 0.32
HOXA3-201ENST00000317201 SMTNL1A8MU46 457 aa17.03■□□□□ 0.32
HOXA3-201ENST00000317201 KLRK1P26718 216 aa17.03■□□□□ 0.32
HOXA3-201ENST00000317201 ZNF804AQ7Z570 1209 aa17.03■□□□□ 0.32
HOXA3-201ENST00000317201 STK32BQ9NY57 414 aa17.03■□□□□ 0.32
HOXA3-201ENST00000317201 TPCN1Q9ULQ1 816 aa17.03■□□□□ 0.32
HOXA3-201ENST00000317201 ME3Q16798 604 aa17.03■□□□□ 0.32
HOXA3-201ENST00000317201 SPTY2D1Q68D10 685 aaPredicted RBP17.03■□□□□ 0.32
HOXA3-201ENST00000317201 SGSM3Q96HU1 749 aa17.03■□□□□ 0.32
HOXA3-201ENST00000317201 MMP10P09238 476 aa17.02■□□□□ 0.32
HOXA3-201ENST00000317201 SRGNP10124 158 aa17.02■□□□□ 0.32
HOXA3-201ENST00000317201 ALDH1B1P30837 517 aa17.02■□□□□ 0.32
HOXA3-201ENST00000317201 GPSM2P81274 684 aa17.02■□□□□ 0.32
HOXA3-201ENST00000317201 BMS1Q14692 1282 aaKnown RBP17.02■□□□□ 0.32
HOXA3-201ENST00000317201 PACS2Q86VP3 889 aa17.02■□□□□ 0.32
HOXA3-201ENST00000317201 TDRD7Q8NHU6 1098 aaKnown RBP17.02■□□□□ 0.32
HOXA3-201ENST00000317201 ZNF215Q9UL58 517 aaPredicted RBP17.02■□□□□ 0.32
HOXA3-201ENST00000317201 MBD4O95243 580 aa17.02■□□□□ 0.31
HOXA3-201ENST00000317201 EZH2Q15910 746 aaKnown RBP17.02■□□□□ 0.31
HOXA3-201ENST00000317201 TTLL5Q6EMB2 1281 aa17.02■□□□□ 0.31
HOXA3-201ENST00000317201 BRMS1Q9HCU9 246 aa17.02■□□□□ 0.31
HOXA3-201ENST00000317201 GGA1Q9UJY5 639 aa17.02■□□□□ 0.31
HOXA3-201ENST00000317201 TIAM2Q8IVF5 1701 aa17.01■□□□□ 0.31
HOXA3-201ENST00000317201 WDR66Q8TBY9 1149 aa17.01■□□□□ 0.31
HOXA3-201ENST00000317201 NACAP1Q9BZK3 213 aa17.01■□□□□ 0.31
HOXA3-201ENST00000317201 RAI14Q9P0K7 980 aa17.01■□□□□ 0.31
HOXA3-201ENST00000317201 BRD1O95696 1058 aa17.01■□□□□ 0.31
HOXA3-201ENST00000317201 CYP7A1P22680 504 aa17.01■□□□□ 0.31
HOXA3-201ENST00000317201 Q6ZUG5 572 aa17.01■□□□□ 0.31
HOXA3-201ENST00000317201 ABCF2Q9UG63 623 aa17.01■□□□□ 0.31
HOXA3-201ENST00000317201 IQSEC3Q9UPP2 1182 aaPredicted RBP17.01■□□□□ 0.31
HOXA3-201ENST00000317201 ATP6V0A2Q9Y487 856 aa17.01■□□□□ 0.31
HOXA3-201ENST00000317201 PPEF1O14829 653 aaPredicted RBP17■□□□□ 0.31
HOXA3-201ENST00000317201 AP5Z1O43299 807 aa17■□□□□ 0.31
HOXA3-201ENST00000317201 LARGE1O95461 756 aa17■□□□□ 0.31
HOXA3-201ENST00000317201 PTGS1P23219 599 aa17■□□□□ 0.31
HOXA3-201ENST00000317201 LRMPQ12912 555 aa17■□□□□ 0.31
HOXA3-201ENST00000317201 IFNL3Q8IZI9 196 aa17■□□□□ 0.31
HOXA3-201ENST00000317201 NCOA7Q8NI08 942 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms