RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 SDF4Q9BRK5 362 aa17.17■□□□□ 0.34
CLK4-201ENST00000316308 TFCP2L1Q9NZI6 479 aa17.17■□□□□ 0.34
CLK4-201ENST00000316308 SLC12A7Q9Y666 1083 aa17.17■□□□□ 0.34
CLK4-201ENST00000316308 CHD4Q14839 1912 aa17.16■□□□□ 0.34
CLK4-201ENST00000316308 BARGINQ6ZT62 677 aa17.16■□□□□ 0.34
CLK4-201ENST00000316308 TXNRD3Q86VQ6 643 aa17.16■□□□□ 0.34
CLK4-201ENST00000316308 SGMS1Q86VZ5 419 aa17.16■□□□□ 0.34
CLK4-201ENST00000316308 SHISA4Q96DD7 197 aa17.16■□□□□ 0.34
CLK4-201ENST00000316308 FAM84BQ96KN1 310 aaPredicted RBP17.16■□□□□ 0.34
CLK4-201ENST00000316308 BAZ2BQ9UIF8 2168 aaKnown RBP17.16■□□□□ 0.34
CLK4-201ENST00000316308 CICQ96RK0 1608 aaPredicted RBP17.16■□□□□ 0.34
CLK4-201ENST00000316308 IARSP41252 1262 aaKnown RBP17.16■□□□□ 0.34
CLK4-201ENST00000316308 SYNE3Q6ZMZ3 975 aa17.16■□□□□ 0.34
CLK4-201ENST00000316308 TMEM87BQ96K49 555 aa17.16■□□□□ 0.34
CLK4-201ENST00000316308 BAZ2AQ9UIF9 1905 aaKnown RBP17.15■□□□□ 0.34
CLK4-201ENST00000316308 PFKFB1P16118 471 aa17.15■□□□□ 0.34
CLK4-201ENST00000316308 GRIN1Q05586 938 aa17.15■□□□□ 0.34
CLK4-201ENST00000316308 ANKRD18AQ8IVF6 992 aa17.15■□□□□ 0.34
CLK4-201ENST00000316308 AOPEPQ8N6M6 819 aa17.15■□□□□ 0.34
CLK4-201ENST00000316308 NUP133Q8WUM0 1156 aa17.15■□□□□ 0.34
CLK4-201ENST00000316308 RREB1Q92766 1687 aa17.15■□□□□ 0.34
CLK4-201ENST00000316308 BTBD18B2RXH4 712 aa17.15■□□□□ 0.34
CLK4-201ENST00000316308 ZNF202O95125 648 aa17.15■□□□□ 0.34
CLK4-201ENST00000316308 GTF2E1P29083 439 aaPredicted RBP17.15■□□□□ 0.34
CLK4-201ENST00000316308 CCDC69A6NI79 296 aa17.14■□□□□ 0.33
CLK4-201ENST00000316308 PPARAQ07869 468 aa17.14■□□□□ 0.33
CLK4-201ENST00000316308 PTPAQ15257 358 aa17.14■□□□□ 0.33
CLK4-201ENST00000316308 STX1AQ16623 288 aa17.14■□□□□ 0.33
CLK4-201ENST00000316308 SHC4Q6S5L8 630 aa17.14■□□□□ 0.33
CLK4-201ENST00000316308 NGLY1Q96IV0 654 aa17.14■□□□□ 0.33
CLK4-201ENST00000316308 MAP3K14Q99558 947 aa17.14■□□□□ 0.33
CLK4-201ENST00000316308 RIOK1Q9BRS2 568 aaKnown RBP17.14■□□□□ 0.33
CLK4-201ENST00000316308 ZNF804BA4D1E1 1349 aa17.14■□□□□ 0.33
CLK4-201ENST00000316308 NR5A1Q13285 461 aa17.14■□□□□ 0.33
CLK4-201ENST00000316308 ATL3Q6DD88 541 aa17.14■□□□□ 0.33
CLK4-201ENST00000316308 BRAPQ7Z569 592 aa17.14■□□□□ 0.33
CLK4-201ENST00000316308 OXER1Q8TDS5 423 aa17.14■□□□□ 0.33
CLK4-201ENST00000316308 CACTINQ8WUQ7 758 aaKnown RBP17.14■□□□□ 0.33
CLK4-201ENST00000316308 COL5A3P25940 1745 aaPredicted RBP17.14■□□□□ 0.33
CLK4-201ENST00000316308 BCORQ6W2J9 1755 aa17.13■□□□□ 0.33
CLK4-201ENST00000316308 CASZ1Q86V15 1759 aa17.13■□□□□ 0.33
CLK4-201ENST00000316308 STAG1Q8WVM7 1258 aa17.13■□□□□ 0.33
CLK4-201ENST00000316308 CDC5LQ99459 802 aaKnown RBP17.13■□□□□ 0.33
CLK4-201ENST00000316308 MYH2Q9UKX2 1941 aa17.13■□□□□ 0.33
CLK4-201ENST00000316308 PNPLA7Q6ZV29 1317 aa17.13■□□□□ 0.33
CLK4-201ENST00000316308 A0A1W2PQ27 194 aa17.13■□□□□ 0.33
CLK4-201ENST00000316308 A0A1W2PQ64 194 aa17.13■□□□□ 0.33
CLK4-201ENST00000316308 A0A1W2PQD8 194 aa17.13■□□□□ 0.33
CLK4-201ENST00000316308 YEATS4O95619 227 aa17.13■□□□□ 0.33
CLK4-201ENST00000316308 LIFRP42702 1097 aa17.13■□□□□ 0.33
CLK4-201ENST00000316308 SLC39A14Q15043 492 aa17.13■□□□□ 0.33
CLK4-201ENST00000316308 KCNG4Q8TDN1 519 aa17.13■□□□□ 0.33
CLK4-201ENST00000316308 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.13■□□□□ 0.33
CLK4-201ENST00000316308 CLIP2Q9UDT6 1046 aa17.13■□□□□ 0.33
CLK4-201ENST00000316308 RTL9Q8NET4 1388 aa17.13■□□□□ 0.33
CLK4-201ENST00000316308 FAM205CA6NFA0 338 aa17.12■□□□□ 0.33
CLK4-201ENST00000316308 FOXN1O15353 648 aa17.12■□□□□ 0.33
CLK4-201ENST00000316308 NMT2O60551 498 aa17.12■□□□□ 0.33
CLK4-201ENST00000316308 TOB1P50616 345 aaPredicted RBP17.12■□□□□ 0.33
CLK4-201ENST00000316308 SF3B3Q15393 1217 aaKnown RBP17.12■□□□□ 0.33
CLK4-201ENST00000316308 CHMP4CQ96CF2 233 aa17.12■□□□□ 0.33
CLK4-201ENST00000316308 BSDC1Q9NW68 430 aaPredicted RBP17.12■□□□□ 0.33
CLK4-201ENST00000316308 ZNF652Q9Y2D9 606 aa17.12■□□□□ 0.33
CLK4-201ENST00000316308 CACNA1SQ13698 1873 aa17.12■□□□□ 0.33
CLK4-201ENST00000316308 MAGEB6P1A0A0J9YX57 407 aa17.12■□□□□ 0.33
CLK4-201ENST00000316308 GNPATO15228 680 aa17.12■□□□□ 0.33
CLK4-201ENST00000316308 ATP2B1P20020 1258 aa17.12■□□□□ 0.33
CLK4-201ENST00000316308 GNL2Q13823 731 aaKnown RBP17.12■□□□□ 0.33
CLK4-201ENST00000316308 WTAPQ15007 396 aa17.12■□□□□ 0.33
CLK4-201ENST00000316308 PTPN21Q16825 1174 aa17.12■□□□□ 0.33
CLK4-201ENST00000316308 NBPF11Q86T75 865 aa17.12■□□□□ 0.33
CLK4-201ENST00000316308 SPTLC3Q9NUV7 552 aa17.12■□□□□ 0.33
CLK4-201ENST00000316308 KIAA1468Q9P260 1216 aa17.12■□□□□ 0.33
CLK4-201ENST00000316308 TPM2P07951 284 aa17.11■□□□□ 0.33
CLK4-201ENST00000316308 PRDX5P30044 214 aa17.11■□□□□ 0.33
CLK4-201ENST00000316308 SMARCC1Q92922 1105 aaPredicted RBP17.11■□□□□ 0.33
CLK4-201ENST00000316308 GPR101Q96P66 508 aaPredicted RBP17.11■□□□□ 0.33
CLK4-201ENST00000316308 SSRP1Q08945 709 aaKnown RBP17.11■□□□□ 0.33
CLK4-201ENST00000316308 CHAF1AQ13111 956 aaPredicted RBP17.11■□□□□ 0.33
CLK4-201ENST00000316308 CLEC4GQ6UXB4 293 aa17.11■□□□□ 0.33
CLK4-201ENST00000316308 FAM13BQ9NYF5 915 aa17.11■□□□□ 0.33
CLK4-201ENST00000316308 GOLGA6L19H0YKK7 550 aa17.1■□□□□ 0.33
CLK4-201ENST00000316308 CTAGE5O15320 804 aa17.1■□□□□ 0.33
CLK4-201ENST00000316308 U2AF2P26368 475 aaKnown RBP eCLIP17.1■□□□□ 0.331e-7■□□□□ 8
CLK4-201ENST00000316308 NOM1Q5C9Z4 860 aaKnown RBP17.1■□□□□ 0.33
CLK4-201ENST00000316308 NACAP1Q9BZK3 213 aa17.1■□□□□ 0.33
CLK4-201ENST00000316308 KRT23Q9C075 422 aa17.1■□□□□ 0.33
CLK4-201ENST00000316308 TNKSO95271 1327 aa17.1■□□□□ 0.33
CLK4-201ENST00000316308 BECN2A8MW95 431 aa17.1■□□□□ 0.33
CLK4-201ENST00000316308 FMNL1O95466 1100 aaPredicted RBP17.1■□□□□ 0.33
CLK4-201ENST00000316308 CYP2D6P10635 497 aa17.1■□□□□ 0.33
CLK4-201ENST00000316308 PNOCQ13519 176 aa17.1■□□□□ 0.33
CLK4-201ENST00000316308 RTN1Q16799 776 aa17.1■□□□□ 0.33
CLK4-201ENST00000316308 ZNF654Q8IZM8 581 aa17.1■□□□□ 0.33
CLK4-201ENST00000316308 KLHL34Q8N239 644 aa17.1■□□□□ 0.33
CLK4-201ENST00000316308 AATFQ9NY61 560 aaKnown RBP eCLIP17.1■□□□□ 0.33
CLK4-201ENST00000316308 A0A1B0GUL6 1792 aa17.09■□□□□ 0.33
CLK4-201ENST00000316308 LAMB2P55268 1798 aa17.09■□□□□ 0.33
CLK4-201ENST00000316308 IFNAR1P17181 557 aa17.09■□□□□ 0.33
CLK4-201ENST00000316308 EARS2Q5JPH6 523 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms