RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 MAP3K10Q02779 954 aa21.61■■□□□ 1.05
EXOSC4-201ENST00000316052 GPAT2Q6NUI2 795 aa21.61■■□□□ 1.05
EXOSC4-201ENST00000316052 SH3TC2Q8TF17 1288 aa21.61■■□□□ 1.05
EXOSC4-201ENST00000316052 NEUROD6Q96NK8 337 aa21.61■■□□□ 1.05
EXOSC4-201ENST00000316052 DOCK2Q92608 1830 aa21.6■■□□□ 1.05
EXOSC4-201ENST00000316052 PNMA6EA0A0J9YXQ4 647 aa21.6■■□□□ 1.05
EXOSC4-201ENST00000316052 CXCL11O14625 94 aa21.6■■□□□ 1.05
EXOSC4-201ENST00000316052 IPO8O15397 1037 aaKnown RBP21.6■■□□□ 1.05
EXOSC4-201ENST00000316052 BTDP43251 543 aa21.6■■□□□ 1.05
EXOSC4-201ENST00000316052 MECOMQ03112 1051 aa21.6■■□□□ 1.05
EXOSC4-201ENST00000316052 MVPQ14764 893 aaKnown RBP21.6■■□□□ 1.05
EXOSC4-201ENST00000316052 SPTY2D1Q68D10 685 aaPredicted RBP21.6■■□□□ 1.05
EXOSC4-201ENST00000316052 PI16Q6UXB8 463 aa21.6■■□□□ 1.05
EXOSC4-201ENST00000316052 ATF7IPQ6VMQ6 1270 aa21.6■■□□□ 1.05
EXOSC4-201ENST00000316052 ZSCAN29Q8IWY8 852 aaPredicted RBP21.6■■□□□ 1.05
EXOSC4-201ENST00000316052 FRAT1Q92837 279 aaPredicted RBP21.6■■□□□ 1.05
EXOSC4-201ENST00000316052 HMG20BQ9P0W2 317 aa21.6■■□□□ 1.05
EXOSC4-201ENST00000316052 GNRH1P01148 92 aa21.59■■□□□ 1.05
EXOSC4-201ENST00000316052 GNAI2P04899 355 aa21.59■■□□□ 1.05
EXOSC4-201ENST00000316052 PSMC4P43686 418 aa21.59■■□□□ 1.05
EXOSC4-201ENST00000316052 RHBDL3P58872 404 aa21.59■■□□□ 1.05
EXOSC4-201ENST00000316052 TBC1D9Q6ZT07 1266 aa21.59■■□□□ 1.05
EXOSC4-201ENST00000316052 ERICH6Q7L0X2 663 aa21.59■■□□□ 1.05
EXOSC4-201ENST00000316052 SLF2Q8IX21 1173 aa21.59■■□□□ 1.05
EXOSC4-201ENST00000316052 SCYL3Q8IZE3 742 aa21.59■■□□□ 1.05
EXOSC4-201ENST00000316052 CLUAP1Q96AJ1 413 aa21.59■■□□□ 1.05
EXOSC4-201ENST00000316052 TRIM47Q96LD4 638 aa21.59■■□□□ 1.05
EXOSC4-201ENST00000316052 ZHX2Q9Y6X8 837 aa21.59■■□□□ 1.05
EXOSC4-201ENST00000316052 MROH7-TTC4A0A0A0MT08 1334 aa21.58■■□□□ 1.05
EXOSC4-201ENST00000316052 GPR75-ASB3A0A0A6YYF3 556 aa21.58■■□□□ 1.05
EXOSC4-201ENST00000316052 PTPRAP18433 802 aa21.58■■□□□ 1.05
EXOSC4-201ENST00000316052 PICALMQ13492 652 aa21.58■■□□□ 1.05
EXOSC4-201ENST00000316052 CYP2C8P10632 490 aa21.57■■□□□ 1.04
EXOSC4-201ENST00000316052 SLC4A8Q2Y0W8 1093 aa21.57■■□□□ 1.04
EXOSC4-201ENST00000316052 SPATA5Q8NB90 893 aa21.57■■□□□ 1.04
EXOSC4-201ENST00000316052 AFG3L2Q9Y4W6 797 aa21.57■■□□□ 1.04
EXOSC4-201ENST00000316052 A0A0G2JLL6 359 aaPredicted RBP21.56■■□□□ 1.04
EXOSC4-201ENST00000316052 OSBPP22059 807 aa21.56■■□□□ 1.04
EXOSC4-201ENST00000316052 PRMT2P55345 433 aa21.56■■□□□ 1.04
EXOSC4-201ENST00000316052 PRRT2Q7Z6L0 340 aaPredicted RBP21.56■■□□□ 1.04
EXOSC4-201ENST00000316052 PICK1Q9NRD5 415 aa21.56■■□□□ 1.04
EXOSC4-201ENST00000316052 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.56■■□□□ 1.04
EXOSC4-201ENST00000316052 SRRDQ9UH36 339 aa21.56■■□□□ 1.04
EXOSC4-201ENST00000316052 PTPRFP10586 1907 aa21.55■■□□□ 1.04
EXOSC4-201ENST00000316052 BCRP11274 1271 aa21.55■■□□□ 1.04
EXOSC4-201ENST00000316052 ARID4AP29374 1257 aaPredicted RBP21.55■■□□□ 1.04
EXOSC4-201ENST00000316052 G3BP1Q13283 466 aaKnown RBP eCLIP21.55■■□□□ 1.04
EXOSC4-201ENST00000316052 GORABQ5T7V8 394 aa21.55■■□□□ 1.04
EXOSC4-201ENST00000316052 NSUN4Q96CB9 384 aaKnown RBP21.55■■□□□ 1.04
EXOSC4-201ENST00000316052 PHIPQ8WWQ0 1821 aa21.55■■□□□ 1.04
EXOSC4-201ENST00000316052 CTNND1O60716 968 aaKnown RBP21.54■■□□□ 1.04
EXOSC4-201ENST00000316052 FMNL1O95466 1100 aaPredicted RBP21.54■■□□□ 1.04
EXOSC4-201ENST00000316052 TMEM57Q8N5G2 664 aa21.54■■□□□ 1.04
EXOSC4-201ENST00000316052 PARK7Q99497 189 aaKnown RBP21.54■■□□□ 1.04
EXOSC4-201ENST00000316052 FAM196BA6NMK8 535 aa21.53■■□□□ 1.04
EXOSC4-201ENST00000316052 MCAMP43121 646 aa21.53■■□□□ 1.04
EXOSC4-201ENST00000316052 MTFR1Q15390 333 aa21.53■■□□□ 1.04
EXOSC4-201ENST00000316052 FASTKD5Q7L8L6 764 aaKnown RBP21.53■■□□□ 1.04
EXOSC4-201ENST00000316052 CCDC84Q86UT8 332 aaPredicted RBP21.53■■□□□ 1.04
EXOSC4-201ENST00000316052 MGAMO43451 1857 aa21.52■■□□□ 1.04
EXOSC4-201ENST00000316052 DOCK1Q14185 1865 aa21.52■■□□□ 1.04
EXOSC4-201ENST00000316052 DOCK3Q8IZD9 2030 aa21.52■■□□□ 1.04
EXOSC4-201ENST00000316052 TBC1D12O60347 775 aa21.52■■□□□ 1.04
EXOSC4-201ENST00000316052 NPM3O75607 178 aaKnown RBP21.52■■□□□ 1.04
EXOSC4-201ENST00000316052 LDHCP07864 332 aa21.52■■□□□ 1.04
EXOSC4-201ENST00000316052 HOXD10P28358 340 aa21.52■■□□□ 1.04
EXOSC4-201ENST00000316052 GADL1Q6ZQY3 521 aa21.52■■□□□ 1.04
EXOSC4-201ENST00000316052 RAI14Q9P0K7 980 aa21.52■■□□□ 1.04
EXOSC4-201ENST00000316052 TRIM75PA6NK02 468 aa21.51■■□□□ 1.03
EXOSC4-201ENST00000316052 GSTO1P78417 241 aa21.51■■□□□ 1.03
EXOSC4-201ENST00000316052 POLA2Q14181 598 aa21.51■■□□□ 1.03
EXOSC4-201ENST00000316052 RAET1EQ8TD07 263 aa21.51■■□□□ 1.03
EXOSC4-201ENST00000316052 GCC1Q96CN9 775 aa21.51■■□□□ 1.03
EXOSC4-201ENST00000316052 MYPNQ86TC9 1320 aa21.51■■□□□ 1.03
EXOSC4-201ENST00000316052 ZKSCAN2Q63HK3 967 aa21.5■■□□□ 1.03
EXOSC4-201ENST00000316052 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.5■■□□□ 1.03
EXOSC4-201ENST00000316052 SNRKQ9NRH2 765 aa21.5■■□□□ 1.03
EXOSC4-201ENST00000316052 PCDH10Q9P2E7 1040 aa21.5■■□□□ 1.03
EXOSC4-201ENST00000316052 MAP4K4O95819 1239 aaPredicted RBP21.49■■□□□ 1.03
EXOSC4-201ENST00000316052 UQCRFS1P1P0C7P4 283 aa21.49■■□□□ 1.03
EXOSC4-201ENST00000316052 GRK4P32298 578 aa21.49■■□□□ 1.03
EXOSC4-201ENST00000316052 ATP8B2P98198 1209 aa21.49■■□□□ 1.03
EXOSC4-201ENST00000316052 PRKCZQ05513 592 aa21.49■■□□□ 1.03
EXOSC4-201ENST00000316052 RRP1BQ14684 758 aaKnown RBP21.49■■□□□ 1.03
EXOSC4-201ENST00000316052 HABP4Q5JVS0 413 aaKnown RBP21.49■■□□□ 1.03
EXOSC4-201ENST00000316052 SSH3Q8TE77 659 aa21.49■■□□□ 1.03
EXOSC4-201ENST00000316052 LRP2BPQ9P2M1 347 aa21.49■■□□□ 1.03
EXOSC4-201ENST00000316052 GABRQQ9UN88 632 aa21.49■■□□□ 1.03
EXOSC4-201ENST00000316052 SLC45A1Q9Y2W3 748 aa21.49■■□□□ 1.03
EXOSC4-201ENST00000316052 FCGRTP55899 365 aa21.48■■□□□ 1.03
EXOSC4-201ENST00000316052 TNNI3KQ59H18 835 aa21.48■■□□□ 1.03
EXOSC4-201ENST00000316052 SH3RF3Q8TEJ3 882 aaPredicted RBP21.48■■□□□ 1.03
EXOSC4-201ENST00000316052 SHISA4Q96DD7 197 aa21.48■■□□□ 1.03
EXOSC4-201ENST00000316052 DBNDD2Q9BQY9 259 aa21.48■■□□□ 1.03
EXOSC4-201ENST00000316052 OSBPL5Q9H0X9 879 aaPredicted RBP21.48■■□□□ 1.03
EXOSC4-201ENST00000316052 C1orf115Q9H7X2 142 aa21.48■■□□□ 1.03
EXOSC4-201ENST00000316052 GPR108Q9NPR9 543 aa21.48■■□□□ 1.03
EXOSC4-201ENST00000316052 FPGT-TNNI3KV9GXZ4 949 aa21.48■■□□□ 1.03
EXOSC4-201ENST00000316052 MYO5AQ9Y4I1 1855 aaKnown RBP21.47■■□□□ 1.03
EXOSC4-201ENST00000316052 RANBP2P49792 3224 aaKnown RBP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms