RNA–Protein interactions for RNA: ENST00000312196.8

MSL3-201, Transcript of MSL complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-201ENST00000312196 ELP3Q9H9T3 547 aa10.38□□□□□ -0.75
MSL3-201ENST00000312196 METTL16Q86W50 562 aaKnown RBP10.38□□□□□ -0.75
MSL3-201ENST00000312196 SPATA5Q8NB90 893 aa10.38□□□□□ -0.75
MSL3-201ENST00000312196 SIL1Q9H173 461 aa10.38□□□□□ -0.75
MSL3-201ENST00000312196 HMG20BQ9P0W2 317 aa10.38□□□□□ -0.75
MSL3-201ENST00000312196 PRDX5P30044 214 aa10.37□□□□□ -0.75
MSL3-201ENST00000312196 SCAF8Q9UPN6 1271 aaKnown RBP10.37□□□□□ -0.75
MSL3-201ENST00000312196 IQSEC3Q9UPP2 1182 aaPredicted RBP10.37□□□□□ -0.75
MSL3-201ENST00000312196 A0A1W2PPC1 479 aa10.36□□□□□ -0.75
MSL3-201ENST00000312196 PHF20L1A8MW92 1017 aa10.36□□□□□ -0.75
MSL3-201ENST00000312196 CTNND1O60716 968 aaKnown RBP10.36□□□□□ -0.75
MSL3-201ENST00000312196 RHBDL3P58872 404 aa10.36□□□□□ -0.75
MSL3-201ENST00000312196 LACTBP83111 547 aaPredicted RBP10.36□□□□□ -0.75
MSL3-201ENST00000312196 HNRNPUQ00839 825 aaKnown RBP eCLIP10.36□□□□□ -0.75
MSL3-201ENST00000312196 MKRN3Q13064 507 aaKnown RBP10.36□□□□□ -0.75
MSL3-201ENST00000312196 PRKG1Q13976 671 aa10.36□□□□□ -0.75
MSL3-201ENST00000312196 TNNI3KQ59H18 835 aa10.36□□□□□ -0.75
MSL3-201ENST00000312196 DZIP1Q86YF9 867 aaKnown RBP10.36□□□□□ -0.75
MSL3-201ENST00000312196 OSBPL5Q9H0X9 879 aaPredicted RBP10.36□□□□□ -0.75
MSL3-201ENST00000312196 FPGT-TNNI3KV9GXZ4 949 aa10.36□□□□□ -0.75
MSL3-201ENST00000312196 PHIPQ8WWQ0 1821 aa10.36□□□□□ -0.75
MSL3-201ENST00000312196 PNMA6EA0A0J9YXQ4 647 aa10.36□□□□□ -0.75
MSL3-201ENST00000312196 POTEFA5A3E0 1075 aa10.36□□□□□ -0.75
MSL3-201ENST00000312196 TIMM10P62072 90 aa10.36□□□□□ -0.75
MSL3-201ENST00000312196 RPAP2Q8IXW5 612 aaPredicted RBP10.36□□□□□ -0.75
MSL3-201ENST00000312196 SCYL3Q8IZE3 742 aa10.36□□□□□ -0.75
MSL3-201ENST00000312196 NSUN4Q96CB9 384 aaKnown RBP10.36□□□□□ -0.75
MSL3-201ENST00000312196 WRNIP1Q96S55 665 aa10.36□□□□□ -0.75
MSL3-201ENST00000312196 LOC285556D6RIA3 1793 aa10.36□□□□□ -0.75
MSL3-201ENST00000312196 MOGSQ13724 837 aa10.35□□□□□ -0.75
MSL3-201ENST00000312196 SLC9C1Q4G0N8 1177 aa10.35□□□□□ -0.75
MSL3-201ENST00000312196 CCDC158Q5M9N0 1113 aa10.35□□□□□ -0.75
MSL3-201ENST00000312196 FASTKD5Q7L8L6 764 aaKnown RBP10.35□□□□□ -0.75
MSL3-201ENST00000312196 FAM43AQ8N2R8 423 aa10.35□□□□□ -0.75
MSL3-201ENST00000312196 DHX36Q9H2U1 1008 aaKnown RBP10.35□□□□□ -0.75
MSL3-201ENST00000312196 SRRDQ9UH36 339 aa10.35□□□□□ -0.75
MSL3-201ENST00000312196 BTBD19C9JJ37 291 aa10.35□□□□□ -0.75
MSL3-201ENST00000312196 RGS3P49796 1198 aa10.35□□□□□ -0.75
MSL3-201ENST00000312196 MECOMQ03112 1051 aa10.35□□□□□ -0.75
MSL3-201ENST00000312196 IRF5Q13568 498 aa10.35□□□□□ -0.75
MSL3-201ENST00000312196 UBE2Q1Q7Z7E8 422 aa10.35□□□□□ -0.75
MSL3-201ENST00000312196 FTSJ3Q8IY81 847 aaKnown RBP10.35□□□□□ -0.75
MSL3-201ENST00000312196 HERC5Q9UII4 1024 aaKnown RBP10.35□□□□□ -0.75
MSL3-201ENST00000312196 A0A0G2JLL6 359 aaPredicted RBP10.34□□□□□ -0.75
MSL3-201ENST00000312196 BTDP43251 543 aa10.34□□□□□ -0.75
MSL3-201ENST00000312196 DIXDC1Q155Q3 683 aa10.34□□□□□ -0.75
MSL3-201ENST00000312196 CEP85Q6P2H3 762 aa10.34□□□□□ -0.75
MSL3-201ENST00000312196 PRRT2Q7Z6L0 340 aaPredicted RBP10.34□□□□□ -0.75
MSL3-201ENST00000312196 FRAT1Q92837 279 aaPredicted RBP10.34□□□□□ -0.75
MSL3-201ENST00000312196 TRIM47Q96LD4 638 aa10.34□□□□□ -0.75
MSL3-201ENST00000312196 PARK7Q99497 189 aaKnown RBP10.34□□□□□ -0.75
MSL3-201ENST00000312196 PTCH2Q9Y6C5 1203 aa10.34□□□□□ -0.75
MSL3-201ENST00000312196 RAB11FIP3O75154 756 aa10.34□□□□□ -0.75
MSL3-201ENST00000312196 BAG3O95817 575 aa10.34□□□□□ -0.75
MSL3-201ENST00000312196 GORABQ5T7V8 394 aa10.34□□□□□ -0.75
MSL3-201ENST00000312196 CDAN1Q8IWY9 1227 aa10.34□□□□□ -0.75
MSL3-201ENST00000312196 SLAIN1Q8ND83 568 aa10.34□□□□□ -0.75
MSL3-201ENST00000312196 PXYLP1Q8TE99 480 aa10.34□□□□□ -0.75
MSL3-201ENST00000312196 GJB1P08034 283 aa10.33□□□□□ -0.76
MSL3-201ENST00000312196 BCRP11274 1271 aa10.33□□□□□ -0.76
MSL3-201ENST00000312196 NFIAQ12857 509 aa10.33□□□□□ -0.76
MSL3-201ENST00000312196 PDE3AQ14432 1141 aa10.33□□□□□ -0.76
MSL3-201ENST00000312196 SH3BP5LQ7L8J4 393 aa10.33□□□□□ -0.76
MSL3-201ENST00000312196 FOXP4Q8IVH2 680 aaPredicted RBP10.33□□□□□ -0.76
MSL3-201ENST00000312196 ZNF384Q8TF68 577 aa10.33□□□□□ -0.76
MSL3-201ENST00000312196 DDX19BQ9UMR2 479 aa10.33□□□□□ -0.76
MSL3-201ENST00000312196 AFG3L2Q9Y4W6 797 aa10.33□□□□□ -0.76
MSL3-201ENST00000312196 MCAMP43121 646 aa10.33□□□□□ -0.76
MSL3-201ENST00000312196 UBXN2AP68543 259 aa10.33□□□□□ -0.76
MSL3-201ENST00000312196 SH3D19Q5HYK7 790 aa10.33□□□□□ -0.76
MSL3-201ENST00000312196 TTC39AQ5SRH9 613 aa10.33□□□□□ -0.76
MSL3-201ENST00000312196 GPAT2Q6NUI2 795 aa10.33□□□□□ -0.76
MSL3-201ENST00000312196 OTUD5Q96G74 571 aa10.33□□□□□ -0.76
MSL3-201ENST00000312196 NEUROD6Q96NK8 337 aa10.33□□□□□ -0.76
MSL3-201ENST00000312196 NOL10Q9BSC4 688 aaKnown RBP10.33□□□□□ -0.76
MSL3-201ENST00000312196 HTATIP2Q9BUP3 242 aa10.33□□□□□ -0.76
MSL3-201ENST00000312196 WDR18Q9BV38 432 aa10.33□□□□□ -0.76
MSL3-201ENST00000312196 TNNQ9UQP3 1299 aa10.33□□□□□ -0.76
MSL3-201ENST00000312196 CDK5RAP2Q96SN8 1893 aa10.32□□□□□ -0.76
MSL3-201ENST00000312196 HMMRO75330 724 aa10.32□□□□□ -0.76
MSL3-201ENST00000312196 EN2P19622 333 aaPredicted RBP10.32□□□□□ -0.76
MSL3-201ENST00000312196 GJA8P48165 433 aa10.32□□□□□ -0.76
MSL3-201ENST00000312196 CACNB3P54284 484 aa10.32□□□□□ -0.76
MSL3-201ENST00000312196 PROCA1Q8NCQ7 364 aaPredicted RBP10.32□□□□□ -0.76
MSL3-201ENST00000312196 PICK1Q9NRD5 415 aa10.32□□□□□ -0.76
MSL3-201ENST00000312196 FZD1Q9UP38 647 aa10.32□□□□□ -0.76
MSL3-201ENST00000312196 PTPRFP10586 1907 aa10.32□□□□□ -0.76
MSL3-201ENST00000312196 SIPA1L1O43166 1804 aa10.32□□□□□ -0.76
MSL3-201ENST00000312196 IRF6O14896 467 aa10.32□□□□□ -0.76
MSL3-201ENST00000312196 SURF6O75683 361 aaKnown RBP10.32□□□□□ -0.76
MSL3-201ENST00000312196 PTPRAP18433 802 aa10.32□□□□□ -0.76
MSL3-201ENST00000312196 INPP5BP32019 993 aa10.32□□□□□ -0.76
MSL3-201ENST00000312196 FCGRTP55899 365 aa10.32□□□□□ -0.76
MSL3-201ENST00000312196 ATAD5Q96QE3 1844 aa10.31□□□□□ -0.76
MSL3-201ENST00000312196 RLBP1P12271 317 aa10.31□□□□□ -0.76
MSL3-201ENST00000312196 TTF1Q15361 905 aaPredicted RBP10.31□□□□□ -0.76
MSL3-201ENST00000312196 ITPRIPQ8IWB1 547 aa10.31□□□□□ -0.76
MSL3-201ENST00000312196 ANKLE1Q8NAG6 615 aa10.31□□□□□ -0.76
MSL3-201ENST00000312196 GTF3C2Q8WUA4 911 aaPredicted RBP10.31□□□□□ -0.76
MSL3-201ENST00000312196 ZKSCAN4Q969J2 545 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms