RNA–Protein interactions for RNA: ENST00000308862.10

PIKFYVE-202, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best) BASIC

Gene PIKFYVE, Length 1,640 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-202ENST00000308862 NBPF3Q9H094 633 aa18.36■□□□□ 0.53
PIKFYVE-202ENST00000308862 TDRD3Q9H7E2 651 aaKnown RBP18.36■□□□□ 0.53
PIKFYVE-202ENST00000308862 MCM9Q9NXL9 1143 aa18.36■□□□□ 0.53
PIKFYVE-202ENST00000308862 MINDY4BA8MYZ0 360 aa18.35■□□□□ 0.53
PIKFYVE-202ENST00000308862 USP17L12C9JPN9 530 aa18.35■□□□□ 0.53
PIKFYVE-202ENST00000308862 USP17L21D6R901 530 aa18.35■□□□□ 0.53
PIKFYVE-202ENST00000308862 DDNO94850 711 aaPredicted RBP18.35■□□□□ 0.53
PIKFYVE-202ENST00000308862 PPARAQ07869 468 aa18.35■□□□□ 0.53
PIKFYVE-202ENST00000308862 CTR9Q6PD62 1173 aa18.35■□□□□ 0.53
PIKFYVE-202ENST00000308862 STOX1Q6ZVD7 989 aa18.35■□□□□ 0.53
PIKFYVE-202ENST00000308862 AMOTL1Q8IY63 956 aa18.35■□□□□ 0.53
PIKFYVE-202ENST00000308862 DDX4Q9NQI0 724 aaKnown RBP18.35■□□□□ 0.53
PIKFYVE-202ENST00000308862 GPRC5DQ9NZD1 345 aa18.35■□□□□ 0.53
PIKFYVE-202ENST00000308862 SAP30BPQ9UHR5 308 aaKnown RBP18.35■□□□□ 0.53
PIKFYVE-202ENST00000308862 CYP2D7A0A087X1C5 515 aa18.34■□□□□ 0.53
PIKFYVE-202ENST00000308862 CACNB3P54284 484 aa18.34■□□□□ 0.53
PIKFYVE-202ENST00000308862 SBK1Q52WX2 424 aa18.34■□□□□ 0.53
PIKFYVE-202ENST00000308862 ZBED3Q96IU2 234 aaPredicted RBP18.34■□□□□ 0.53
PIKFYVE-202ENST00000308862 TMOD2Q9NZR1 351 aa18.34■□□□□ 0.53
PIKFYVE-202ENST00000308862 E7EWF7 191 aa18.34■□□□□ 0.53
PIKFYVE-202ENST00000308862 CYP2D6P10635 497 aa18.34■□□□□ 0.53
PIKFYVE-202ENST00000308862 CASTP20810 708 aaKnown RBP18.34■□□□□ 0.53
PIKFYVE-202ENST00000308862 CTDSPL2Q05D32 466 aa18.34■□□□□ 0.53
PIKFYVE-202ENST00000308862 NFIAQ12857 509 aa18.34■□□□□ 0.53
PIKFYVE-202ENST00000308862 KIF4BQ2VIQ3 1234 aa18.34■□□□□ 0.53
PIKFYVE-202ENST00000308862 SLC4A8Q2Y0W8 1093 aa18.34■□□□□ 0.53
PIKFYVE-202ENST00000308862 SPDYE2Q495Y8 402 aa18.34■□□□□ 0.53
PIKFYVE-202ENST00000308862 IDI2Q9BXS1 227 aa18.34■□□□□ 0.53
PIKFYVE-202ENST00000308862 UPF3BQ9BZI7 483 aaKnown RBP18.34■□□□□ 0.53
PIKFYVE-202ENST00000308862 ANAPC4Q9UJX5 808 aa18.34■□□□□ 0.53
PIKFYVE-202ENST00000308862 CLRN2A0PK11 232 aa18.33■□□□□ 0.52
PIKFYVE-202ENST00000308862 H7C1D1 291 aa18.33■□□□□ 0.52
PIKFYVE-202ENST00000308862 WNT10BO00744 389 aa18.33■□□□□ 0.52
PIKFYVE-202ENST00000308862 MYO1BO43795 1136 aa18.33■□□□□ 0.52
PIKFYVE-202ENST00000308862 EGFRP00533 1210 aa18.33■□□□□ 0.52
PIKFYVE-202ENST00000308862 PSMA5P28066 241 aa18.33■□□□□ 0.52
PIKFYVE-202ENST00000308862 TBC1D10BQ4KMP7 808 aaPredicted RBP18.33■□□□□ 0.52
PIKFYVE-202ENST00000308862 SAMD7Q7Z3H4 446 aa18.33■□□□□ 0.52
PIKFYVE-202ENST00000308862 TM6SF1Q9BZW5 370 aa18.33■□□□□ 0.52
PIKFYVE-202ENST00000308862 OSBPL5Q9H0X9 879 aaPredicted RBP18.33■□□□□ 0.52
PIKFYVE-202ENST00000308862 ZNF70Q9UC06 446 aaPredicted RBP18.33■□□□□ 0.52
PIKFYVE-202ENST00000308862 ROBO3Q96MS0 1386 aa18.33■□□□□ 0.52
PIKFYVE-202ENST00000308862 POLR3DP05423 398 aaPredicted RBP18.32■□□□□ 0.52
PIKFYVE-202ENST00000308862 LMOD1P29536 600 aaPredicted RBP18.32■□□□□ 0.52
PIKFYVE-202ENST00000308862 NBPF9Q3BBW0 867 aa18.32■□□□□ 0.52
PIKFYVE-202ENST00000308862 RBM26Q5T8P6 1007 aaKnown RBP18.32■□□□□ 0.52
PIKFYVE-202ENST00000308862 DPY19L2Q6NUT2 758 aa18.32■□□□□ 0.52
PIKFYVE-202ENST00000308862 FAM198AQ9UFP1 575 aa18.32■□□□□ 0.52
PIKFYVE-202ENST00000308862 NEDD4P46934 1319 aa18.32■□□□□ 0.52
PIKFYVE-202ENST00000308862 SMIM22K7EJ46 135 aa18.31■□□□□ 0.52
PIKFYVE-202ENST00000308862 NPM3O75607 178 aaKnown RBP18.31■□□□□ 0.52
PIKFYVE-202ENST00000308862 EVX2Q03828 476 aa18.31■□□□□ 0.52
PIKFYVE-202ENST00000308862 AKNAD1Q5T1N1 836 aa18.31■□□□□ 0.52
PIKFYVE-202ENST00000308862 C12orf60Q5U649 245 aa18.31■□□□□ 0.52
PIKFYVE-202ENST00000308862 BLOC1S2Q6QNY1 142 aa18.31■□□□□ 0.52
PIKFYVE-202ENST00000308862 STAG1Q8WVM7 1258 aa18.31■□□□□ 0.52
PIKFYVE-202ENST00000308862 NEK1Q96PY6 1258 aa18.31■□□□□ 0.52
PIKFYVE-202ENST00000308862 COL2A1P02458 1487 aaPredicted RBP18.31■□□□□ 0.52
PIKFYVE-202ENST00000308862 DCAF8L1A6NGE4 600 aa18.31■□□□□ 0.52
PIKFYVE-202ENST00000308862 CPA1P15085 419 aa18.31■□□□□ 0.52
PIKFYVE-202ENST00000308862 NEK4P51957 841 aa18.31■□□□□ 0.52
PIKFYVE-202ENST00000308862 TCP10Q12799 353 aa18.31■□□□□ 0.52
PIKFYVE-202ENST00000308862 RALYLQ86SE5 291 aaKnown RBP18.31■□□□□ 0.52
PIKFYVE-202ENST00000308862 STK11IPQ8N1F8 1099 aa18.31■□□□□ 0.52
PIKFYVE-202ENST00000308862 RNF41Q9H4P4 317 aaPredicted RBP18.31■□□□□ 0.52
PIKFYVE-202ENST00000308862 VEZTQ9HBM0 779 aa18.31■□□□□ 0.52
PIKFYVE-202ENST00000308862 ZSWIM6Q9HCJ5 1215 aa18.31■□□□□ 0.52
PIKFYVE-202ENST00000308862 CYP46A1Q9Y6A2 500 aa18.31■□□□□ 0.52
PIKFYVE-202ENST00000308862 SIPA1L1O43166 1804 aa18.3■□□□□ 0.52
PIKFYVE-202ENST00000308862 ENTPD3O75355 529 aa18.3■□□□□ 0.52
PIKFYVE-202ENST00000308862 SLC3A2P08195 630 aaKnown RBP18.3■□□□□ 0.52
PIKFYVE-202ENST00000308862 EPS15P42566 896 aa18.3■□□□□ 0.52
PIKFYVE-202ENST00000308862 TRDNQ13061 729 aa18.3■□□□□ 0.52
PIKFYVE-202ENST00000308862 MFSD6Q6ZSS7 791 aa18.3■□□□□ 0.52
PIKFYVE-202ENST00000308862 RUFY3Q7L099 469 aa18.3■□□□□ 0.52
PIKFYVE-202ENST00000308862 NCOA7Q8NI08 942 aa18.3■□□□□ 0.52
PIKFYVE-202ENST00000308862 TRPM4Q8TD43 1214 aa18.3■□□□□ 0.52
PIKFYVE-202ENST00000308862 L3MBTL3Q96JM7 780 aaPredicted RBP18.3■□□□□ 0.52
PIKFYVE-202ENST00000308862 TCP10L2B9ZVM9 353 aa18.29■□□□□ 0.52
PIKFYVE-202ENST00000308862 ST18O60284 1047 aa18.29■□□□□ 0.52
PIKFYVE-202ENST00000308862 HMGB1P09429 215 aaKnown RBP18.29■□□□□ 0.52
PIKFYVE-202ENST00000308862 PLCD1P51178 756 aa18.29■□□□□ 0.52
PIKFYVE-202ENST00000308862 COL9A3Q14050 684 aaPredicted RBP18.29■□□□□ 0.52
PIKFYVE-202ENST00000308862 CNNM2Q9H8M5 875 aa18.29■□□□□ 0.52
PIKFYVE-202ENST00000308862 TOMM22Q9NS69 142 aa18.29■□□□□ 0.52
PIKFYVE-202ENST00000308862 TACC3Q9Y6A5 838 aa18.29■□□□□ 0.52
PIKFYVE-202ENST00000308862 WDR90Q96KV7 1748 aa18.29■□□□□ 0.52
PIKFYVE-202ENST00000308862 CNTNAP1P78357 1384 aa18.28■□□□□ 0.52
PIKFYVE-202ENST00000308862 ATRNL1Q5VV63 1379 aa18.28■□□□□ 0.52
PIKFYVE-202ENST00000308862 GLTPD2A6NH11 291 aa18.28■□□□□ 0.52
PIKFYVE-202ENST00000308862 PCP11498 1178 aaKnown RBP18.28■□□□□ 0.52
PIKFYVE-202ENST00000308862 RPS6KB1P23443 525 aa18.28■□□□□ 0.52
PIKFYVE-202ENST00000308862 FKBP1CQ5VVH2 108 aa18.28■□□□□ 0.52
PIKFYVE-202ENST00000308862 TTC6Q86TZ1 520 aa18.28■□□□□ 0.52
PIKFYVE-202ENST00000308862 ZFPM1Q8IX07 1006 aa18.28■□□□□ 0.52
PIKFYVE-202ENST00000308862 INCENPQ9NQS7 918 aa18.28■□□□□ 0.52
PIKFYVE-202ENST00000308862 SCN4AP35499 1836 aa18.28■□□□□ 0.52
PIKFYVE-202ENST00000308862 B4E1Z4 1266 aa18.27■□□□□ 0.52
PIKFYVE-202ENST00000308862 HLA-DOAP06340 250 aa18.27■□□□□ 0.52
PIKFYVE-202ENST00000308862 RRP12Q5JTH9 1297 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms