RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 TPM2P07951 284 aa21.65■■□□□ 1.06
RNF139-201ENST00000303545 CPLX2Q6PUV4 134 aaKnown RBP21.65■■□□□ 1.06
RNF139-201ENST00000303545 KCNG4Q8TDN1 519 aa21.65■■□□□ 1.06
RNF139-201ENST00000303545 CTAGE5O15320 804 aa21.65■■□□□ 1.06
RNF139-201ENST00000303545 CDKL5O76039 1030 aa21.65■■□□□ 1.06
RNF139-201ENST00000303545 MINPP1Q9UNW1 487 aa21.65■■□□□ 1.06
RNF139-201ENST00000303545 COL1A1P02452 1464 aaPredicted RBP21.64■■□□□ 1.06
RNF139-201ENST00000303545 GOLGA6L6A8MZA4 724 aa21.64■■□□□ 1.06
RNF139-201ENST00000303545 PLA2G4DQ86XP0 818 aa21.64■■□□□ 1.06
RNF139-201ENST00000303545 KCNJ14Q9UNX9 436 aa21.64■■□□□ 1.06
RNF139-201ENST00000303545 BECN2A8MW95 431 aa21.64■■□□□ 1.05
RNF139-201ENST00000303545 EVX2Q03828 476 aa21.64■■□□□ 1.05
RNF139-201ENST00000303545 AOPEPQ8N6M6 819 aa21.64■■□□□ 1.05
RNF139-201ENST00000303545 CLIC6Q96NY7 704 aa21.64■■□□□ 1.05
RNF139-201ENST00000303545 BCL2L12Q9HB09 334 aa21.64■■□□□ 1.05
RNF139-201ENST00000303545 TFCP2L1Q9NZI6 479 aa21.64■■□□□ 1.05
RNF139-201ENST00000303545 MAGEB6P1A0A0J9YX57 407 aa21.63■■□□□ 1.05
RNF139-201ENST00000303545 PRDM1O75626 825 aa21.63■■□□□ 1.05
RNF139-201ENST00000303545 YEATS4O95619 227 aa21.63■■□□□ 1.05
RNF139-201ENST00000303545 PPARAQ07869 468 aa21.63■■□□□ 1.05
RNF139-201ENST00000303545 SSRP1Q08945 709 aaKnown RBP21.63■■□□□ 1.05
RNF139-201ENST00000303545 WTAPQ15007 396 aa21.63■■□□□ 1.05
RNF139-201ENST00000303545 SGMS1Q86VZ5 419 aa21.63■■□□□ 1.05
RNF139-201ENST00000303545 KRT23Q9C075 422 aa21.63■■□□□ 1.05
RNF139-201ENST00000303545 CLIP2Q9UDT6 1046 aa21.63■■□□□ 1.05
RNF139-201ENST00000303545 ECM29Q5VYK3 1845 aa21.63■■□□□ 1.05
RNF139-201ENST00000303545 AMIGO3Q86WK7 504 aa21.63■■□□□ 1.05
RNF139-201ENST00000303545 DHX40Q8IX18 779 aaKnown RBP21.63■■□□□ 1.05
RNF139-201ENST00000303545 ZNF202O95125 648 aa21.62■■□□□ 1.05
RNF139-201ENST00000303545 PFKFB1P16118 471 aa21.62■■□□□ 1.05
RNF139-201ENST00000303545 TRIM29Q14134 588 aa21.62■■□□□ 1.05
RNF139-201ENST00000303545 CCDC144BQ3MJ40 725 aa21.62■■□□□ 1.05
RNF139-201ENST00000303545 AXDND1Q5T1B0 1012 aaPredicted RBP21.62■■□□□ 1.05
RNF139-201ENST00000303545 CNNM2Q9H8M5 875 aa21.62■■□□□ 1.05
RNF139-201ENST00000303545 BCL9LQ86UU0 1499 aa21.62■■□□□ 1.05
RNF139-201ENST00000303545 SLC4A8Q2Y0W8 1093 aa21.62■■□□□ 1.05
RNF139-201ENST00000303545 STAG1Q8WVM7 1258 aa21.62■■□□□ 1.05
RNF139-201ENST00000303545 RTL9Q8NET4 1388 aa21.62■■□□□ 1.05
RNF139-201ENST00000303545 RREB1Q92766 1687 aa21.62■■□□□ 1.05
RNF139-201ENST00000303545 PNPLA7Q6ZV29 1317 aa21.62■■□□□ 1.05
RNF139-201ENST00000303545 A0A1W2PQ27 194 aa21.61■■□□□ 1.05
RNF139-201ENST00000303545 A0A1W2PQ64 194 aa21.61■■□□□ 1.05
RNF139-201ENST00000303545 A0A1W2PQD8 194 aa21.61■■□□□ 1.05
RNF139-201ENST00000303545 LIFRP42702 1097 aa21.61■■□□□ 1.05
RNF139-201ENST00000303545 DPCR1Q3MIW9 517 aa21.61■■□□□ 1.05
RNF139-201ENST00000303545 KIAA1524Q8TCG1 905 aa21.61■■□□□ 1.05
RNF139-201ENST00000303545 FAM84BQ96KN1 310 aaPredicted RBP21.61■■□□□ 1.05
RNF139-201ENST00000303545 hCG_1642624A0A1W2PR95 340 aa21.61■■□□□ 1.05
RNF139-201ENST00000303545 GNPATO15228 680 aa21.61■■□□□ 1.05
RNF139-201ENST00000303545 GNAT2P19087 354 aa21.61■■□□□ 1.05
RNF139-201ENST00000303545 ARID5BQ14865 1188 aa21.61■■□□□ 1.05
RNF139-201ENST00000303545 SPECC1Q5M775 1068 aa21.61■■□□□ 1.05
RNF139-201ENST00000303545 CLEC4GQ6UXB4 293 aa21.61■■□□□ 1.05
RNF139-201ENST00000303545 ZNF384Q8TF68 577 aa21.61■■□□□ 1.05
RNF139-201ENST00000303545 ANO10Q9NW15 660 aa21.61■■□□□ 1.05
RNF139-201ENST00000303545 BSDC1Q9NW68 430 aaPredicted RBP21.61■■□□□ 1.05
RNF139-201ENST00000303545 CHAF1AQ13111 956 aaPredicted RBP21.6■■□□□ 1.05
RNF139-201ENST00000303545 RTN1Q16799 776 aa21.6■■□□□ 1.05
RNF139-201ENST00000303545 CAVIN4Q5BKX8 364 aa21.6■■□□□ 1.05
RNF139-201ENST00000303545 GNL3LQ9NVN8 582 aaKnown RBP21.6■■□□□ 1.05
RNF139-201ENST00000303545 LTBP4Q8N2S1 1624 aa21.6■■□□□ 1.05
RNF139-201ENST00000303545 ERICH2A1L162 156 aa21.6■■□□□ 1.05
RNF139-201ENST00000303545 BTBD18B2RXH4 712 aa21.6■■□□□ 1.05
RNF139-201ENST00000303545 ATP2B1P20020 1258 aa21.6■■□□□ 1.05
RNF139-201ENST00000303545 SLC39A14Q15043 492 aa21.6■■□□□ 1.05
RNF139-201ENST00000303545 TSC1Q92574 1164 aa21.6■■□□□ 1.05
RNF139-201ENST00000303545 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.6■■□□□ 1.05
RNF139-201ENST00000303545 CICQ96RK0 1608 aaPredicted RBP21.6■■□□□ 1.05
RNF139-201ENST00000303545 BAZ2AQ9UIF9 1905 aaKnown RBP21.6■■□□□ 1.05
RNF139-201ENST00000303545 KIAA1468Q9P260 1216 aa21.59■■□□□ 1.05
RNF139-201ENST00000303545 COL5A3P25940 1745 aaPredicted RBP21.59■■□□□ 1.05
RNF139-201ENST00000303545 SF3B3Q15393 1217 aaKnown RBP21.59■■□□□ 1.05
RNF139-201ENST00000303545 NBPF5PQ86XG9 351 aaPredicted RBP21.59■■□□□ 1.05
RNF139-201ENST00000303545 ZNF804BA4D1E1 1349 aa21.59■■□□□ 1.05
RNF139-201ENST00000303545 LAMB2P55268 1798 aa21.59■■□□□ 1.05
RNF139-201ENST00000303545 BCORQ6W2J9 1755 aa21.59■■□□□ 1.05
RNF139-201ENST00000303545 FMNL1O95466 1100 aaPredicted RBP21.59■■□□□ 1.05
RNF139-201ENST00000303545 SART3Q15020 963 aaKnown RBP21.59■■□□□ 1.05
RNF139-201ENST00000303545 CEP57L1Q8IYX8 460 aa21.59■■□□□ 1.05
RNF139-201ENST00000303545 UBAC1Q9BSL1 405 aa21.59■■□□□ 1.05
RNF139-201ENST00000303545 CASZ1Q86V15 1759 aa21.58■■□□□ 1.05
RNF139-201ENST00000303545 SLC3A2P08195 630 aaKnown RBP21.58■■□□□ 1.05
RNF139-201ENST00000303545 UBE4AQ14139 1066 aa21.58■■□□□ 1.05
RNF139-201ENST00000303545 ZRSR1Q15695 479 aaKnown RBP21.58■■□□□ 1.05
RNF139-201ENST00000303545 SHC4Q6S5L8 630 aa21.58■■□□□ 1.05
RNF139-201ENST00000303545 SETDB2Q96T68 719 aa21.58■■□□□ 1.05
RNF139-201ENST00000303545 RIOK1Q9BRS2 568 aaKnown RBP21.58■■□□□ 1.05
RNF139-201ENST00000303545 ZNF654Q8IZM8 581 aa21.58■■□□□ 1.04
RNF139-201ENST00000303545 MAP3K14Q99558 947 aa21.58■■□□□ 1.04
RNF139-201ENST00000303545 FAM13BQ9NYF5 915 aa21.58■■□□□ 1.04
RNF139-201ENST00000303545 NPHP1O15259 732 aa21.57■■□□□ 1.04
RNF139-201ENST00000303545 NR5A1Q13285 461 aa21.57■■□□□ 1.04
RNF139-201ENST00000303545 PTPAQ15257 358 aa21.57■■□□□ 1.04
RNF139-201ENST00000303545 CACTINQ8WUQ7 758 aaKnown RBP21.57■■□□□ 1.04
RNF139-201ENST00000303545 TNKSO95271 1327 aa21.57■■□□□ 1.04
RNF139-201ENST00000303545 CMA1P23946 247 aa21.57■■□□□ 1.04
RNF139-201ENST00000303545 SPTLC3Q9NUV7 552 aa21.57■■□□□ 1.04
RNF139-201ENST00000303545 MYH2Q9UKX2 1941 aa21.56■■□□□ 1.04
RNF139-201ENST00000303545 EP400Q96L91 3159 aa21.56■■□□□ 1.04
RNF139-201ENST00000303545 ZPR1O75312 459 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms