RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 NACAP1Q9BZK3 213 aa25.5■■□□□ 1.67
TPM4-201ENST00000300933 LRRC4BQ9NT99 713 aa25.5■■□□□ 1.67
TPM4-201ENST00000300933 ARAP2Q8WZ64 1704 aa25.5■■□□□ 1.67
TPM4-201ENST00000300933 SLC10A5Q5PT55 438 aa25.5■■□□□ 1.67
TPM4-201ENST00000300933 FAM217BQ9NTX9 383 aaPredicted RBP25.5■■□□□ 1.67
TPM4-201ENST00000300933 ZMYM6O95789 1325 aa25.5■■□□□ 1.67
TPM4-201ENST00000300933 FBXW7Q969H0 707 aa25.5■■□□□ 1.67
TPM4-201ENST00000300933 ALG1Q9BT22 464 aa25.5■■□□□ 1.67
TPM4-201ENST00000300933 CLSTN2Q9H4D0 955 aa25.5■■□□□ 1.67
TPM4-201ENST00000300933 BTAF1O14981 1849 aa25.49■■□□□ 1.67
TPM4-201ENST00000300933 GOLGA8AA7E2F4 631 aa25.49■■□□□ 1.67
TPM4-201ENST00000300933 ANO6Q4KMQ2 910 aa25.49■■□□□ 1.67
TPM4-201ENST00000300933 RC3H1Q5TC82 1133 aaKnown RBP25.49■■□□□ 1.67
TPM4-201ENST00000300933 GPR101Q96P66 508 aaPredicted RBP25.49■■□□□ 1.67
TPM4-201ENST00000300933 SPTLC3Q9NUV7 552 aa25.49■■□□□ 1.67
TPM4-201ENST00000300933 RANBP6O60518 1105 aaKnown RBP25.49■■□□□ 1.67
TPM4-201ENST00000300933 ZNF396Q96N95 335 aaPredicted RBP25.49■■□□□ 1.67
TPM4-201ENST00000300933 PYCARDQ9ULZ3 195 aa25.49■■□□□ 1.67
TPM4-201ENST00000300933 SLC12A7Q9Y666 1083 aa25.49■■□□□ 1.67
TPM4-201ENST00000300933 A0A0U1RQG5 324 aaPredicted RBP25.48■■□□□ 1.67
TPM4-201ENST00000300933 UTP14CQ5TAP6 766 aaKnown RBP25.48■■□□□ 1.67
TPM4-201ENST00000300933 NYXQ9GZU5 481 aa25.48■■□□□ 1.67
TPM4-201ENST00000300933 BCORQ6W2J9 1755 aa25.48■■□□□ 1.67
TPM4-201ENST00000300933 PCDHA7Q9UN72 937 aa25.48■■□□□ 1.67
TPM4-201ENST00000300933 A0A1B0GVL5 298 aa25.47■■□□□ 1.67
TPM4-201ENST00000300933 CCDC69A6NI79 296 aa25.47■■□□□ 1.67
TPM4-201ENST00000300933 PPARAQ07869 468 aa25.47■■□□□ 1.67
TPM4-201ENST00000300933 TMEM87BQ96K49 555 aa25.47■■□□□ 1.67
TPM4-201ENST00000300933 SLC26A6Q9BXS9 759 aa25.47■■□□□ 1.67
TPM4-201ENST00000300933 DDX19AQ9NUU7 478 aaKnown RBP25.47■■□□□ 1.67
TPM4-201ENST00000300933 AFF2P51816 1311 aa25.47■■□□□ 1.67
TPM4-201ENST00000300933 WDR19Q8NEZ3 1342 aa25.47■■□□□ 1.67
TPM4-201ENST00000300933 PRDX5P30044 214 aa25.47■■□□□ 1.67
TPM4-201ENST00000300933 TM4SF1P30408 202 aa25.47■■□□□ 1.67
TPM4-201ENST00000300933 PNPLA7Q6ZV29 1317 aa25.46■■□□□ 1.67
TPM4-201ENST00000300933 GUCY1A2P33402 732 aa25.46■■□□□ 1.67
TPM4-201ENST00000300933 TRAPPC3LQ5T215 181 aa25.46■■□□□ 1.67
TPM4-201ENST00000300933 SEPT12Q8IYM1 358 aa25.46■■□□□ 1.67
TPM4-201ENST00000300933 FSIP1Q8NA03 581 aa25.46■■□□□ 1.67
TPM4-201ENST00000300933 NUP133Q8WUM0 1156 aa25.46■■□□□ 1.67
TPM4-201ENST00000300933 KCNF1Q9H3M0 494 aa25.46■■□□□ 1.67
TPM4-201ENST00000300933 RIOK3O14730 519 aaKnown RBP25.46■■□□□ 1.67
TPM4-201ENST00000300933 PDCL2Q8N4E4 241 aa25.46■■□□□ 1.67
TPM4-201ENST00000300933 RIOK1Q9BRS2 568 aaKnown RBP25.46■■□□□ 1.67
TPM4-201ENST00000300933 DNAJC25Q9H1X3 360 aa25.46■■□□□ 1.67
TPM4-201ENST00000300933 HSPA1LP34931 641 aa25.45■■□□□ 1.67
TPM4-201ENST00000300933 KIF23Q02241 960 aaPredicted RBP25.45■■□□□ 1.67
TPM4-201ENST00000300933 NFIXQ14938 502 aa25.45■■□□□ 1.67
TPM4-201ENST00000300933 SF3A1Q15459 793 aaKnown RBP25.45■■□□□ 1.67
TPM4-201ENST00000300933 NTRK3Q16288 839 aa25.45■■□□□ 1.67
TPM4-201ENST00000300933 AATFQ9NY61 560 aaKnown RBP eCLIP25.45■■□□□ 1.67
TPM4-201ENST00000300933 DOCK2Q92608 1830 aa25.45■■□□□ 1.66
TPM4-201ENST00000300933 GNAT2P19087 354 aa25.45■■□□□ 1.66
TPM4-201ENST00000300933 SNW1Q13573 536 aaKnown RBP25.45■■□□□ 1.66
TPM4-201ENST00000300933 STK38Q15208 465 aa25.45■■□□□ 1.66
TPM4-201ENST00000300933 MARCKSP29966 332 aaPredicted RBP25.44■■□□□ 1.66
TPM4-201ENST00000300933 HIBADHP31937 336 aaKnown RBP25.44■■□□□ 1.66
TPM4-201ENST00000300933 IARSP41252 1262 aaKnown RBP25.44■■□□□ 1.66
TPM4-201ENST00000300933 MYSM1Q5VVJ2 828 aa25.44■■□□□ 1.66
TPM4-201ENST00000300933 KRT40Q6A162 431 aa25.44■■□□□ 1.66
TPM4-201ENST00000300933 FBXO33Q7Z6M2 555 aa25.44■■□□□ 1.66
TPM4-201ENST00000300933 IGSF3O75054 1194 aa25.44■■□□□ 1.66
TPM4-201ENST00000300933 MECOMQ03112 1051 aa25.44■■□□□ 1.66
TPM4-201ENST00000300933 STAG1Q8WVM7 1258 aa25.44■■□□□ 1.66
TPM4-201ENST00000300933 CHMP4CQ96CF2 233 aa25.44■■□□□ 1.66
TPM4-201ENST00000300933 KRT23Q9C075 422 aa25.44■■□□□ 1.66
TPM4-201ENST00000300933 WTAPQ15007 396 aa25.43■■□□□ 1.66
TPM4-201ENST00000300933 LINC00301Q8NCQ3 95 aa25.43■■□□□ 1.66
TPM4-201ENST00000300933 KIAA1524Q8TCG1 905 aa25.43■■□□□ 1.66
TPM4-201ENST00000300933 ANKIB1Q9P2G1 1089 aa25.43■■□□□ 1.66
TPM4-201ENST00000300933 U2AF2P26368 475 aaKnown RBP eCLIP25.43■■□□□ 1.663e-8■□□□□ 9.8
TPM4-201ENST00000300933 CBX8Q9HC52 389 aa25.43■■□□□ 1.66
TPM4-201ENST00000300933 LAMB2P55268 1798 aa25.43■■□□□ 1.66
TPM4-201ENST00000300933 CCDC73Q6ZRK6 1079 aa25.42■■□□□ 1.66
TPM4-201ENST00000300933 SGMS1Q86VZ5 419 aa25.42■■□□□ 1.66
TPM4-201ENST00000300933 CNNM2Q9H8M5 875 aa25.42■■□□□ 1.66
TPM4-201ENST00000300933 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.42■■□□□ 1.66
TPM4-201ENST00000300933 GNL2Q13823 731 aaKnown RBP25.42■■□□□ 1.66
TPM4-201ENST00000300933 SYNE3Q6ZMZ3 975 aa25.42■■□□□ 1.66
TPM4-201ENST00000300933 RTEL1Q9NZ71 1219 aa25.42■■□□□ 1.66
TPM4-201ENST00000300933 hCG_1642624A0A1W2PR95 340 aa25.41■■□□□ 1.66
TPM4-201ENST00000300933 NSUN4Q96CB9 384 aaKnown RBP25.41■■□□□ 1.66
TPM4-201ENST00000300933 CICQ96RK0 1608 aaPredicted RBP25.41■■□□□ 1.66
TPM4-201ENST00000300933 LIFRP42702 1097 aa25.41■■□□□ 1.66
TPM4-201ENST00000300933 FAM200AQ8TCP9 573 aa25.41■■□□□ 1.66
TPM4-201ENST00000300933 KCNJ14Q9UNX9 436 aa25.41■■□□□ 1.66
TPM4-201ENST00000300933 CASZ1Q86V15 1759 aa25.41■■□□□ 1.66
TPM4-201ENST00000300933 BAZ2AQ9UIF9 1905 aaKnown RBP25.41■■□□□ 1.66
TPM4-201ENST00000300933 USP17L12C9JPN9 530 aa25.4■■□□□ 1.66
TPM4-201ENST00000300933 USP17L21D6R901 530 aa25.4■■□□□ 1.66
TPM4-201ENST00000300933 NDUFA8P51970 172 aa25.4■■□□□ 1.66
TPM4-201ENST00000300933 CPLX2Q6PUV4 134 aaKnown RBP25.4■■□□□ 1.66
TPM4-201ENST00000300933 SPATA31A6Q5VVP1 1343 aa25.4■■□□□ 1.66
TPM4-201ENST00000300933 ENGASEQ8NFI3 743 aa25.4■■□□□ 1.66
TPM4-201ENST00000300933 UBAC1Q9BSL1 405 aa25.4■■□□□ 1.66
TPM4-201ENST00000300933 ERICH2A1L162 156 aa25.39■■□□□ 1.66
TPM4-201ENST00000300933 SPTLC2O15270 562 aa25.39■■□□□ 1.66
TPM4-201ENST00000300933 CYP2D6P10635 497 aa25.39■■□□□ 1.66
TPM4-201ENST00000300933 MYH15Q9Y2K3 1946 aa25.39■■□□□ 1.65
TPM4-201ENST00000300933 C4AP0C0L4 1744 aa25.39■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms