RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 CUTAO60888 179 aa18.5■□□□□ 0.55
SNAPC4-201ENST00000298532 TBC1D8BQ0IIM8 1120 aa18.5■□□□□ 0.55
SNAPC4-201ENST00000298532 PARP10Q53GL7 1025 aa18.5■□□□□ 0.55
SNAPC4-201ENST00000298532 DTHD1Q6ZMT9 781 aa18.5■□□□□ 0.55
SNAPC4-201ENST00000298532 TM6SF1Q9BZW5 370 aa18.5■□□□□ 0.55
SNAPC4-201ENST00000298532 VPS16Q9H269 839 aa18.5■□□□□ 0.55
SNAPC4-201ENST00000298532 TFCP2Q12800 502 aa18.49■□□□□ 0.55
SNAPC4-201ENST00000298532 ERCC6LQ2NKX8 1250 aa18.49■□□□□ 0.55
SNAPC4-201ENST00000298532 KRT79Q5XKE5 535 aa18.49■□□□□ 0.55
SNAPC4-201ENST00000298532 GPT2Q8TD30 523 aa18.49■□□□□ 0.55
SNAPC4-201ENST00000298532 KDM5CP41229 1560 aa18.49■□□□□ 0.55
SNAPC4-201ENST00000298532 SBNO2Q9Y2G9 1366 aa18.49■□□□□ 0.55
SNAPC4-201ENST00000298532 VGLL3A8MV65 326 aa18.49■□□□□ 0.55
SNAPC4-201ENST00000298532 TTLL12Q14166 644 aaPredicted RBP18.49■□□□□ 0.55
SNAPC4-201ENST00000298532 UTP14CQ5TAP6 766 aaKnown RBP18.49■□□□□ 0.55
SNAPC4-201ENST00000298532 IFT20Q8IY31 132 aa18.49■□□□□ 0.55
SNAPC4-201ENST00000298532 CWF19L2Q2TBE0 894 aaKnown RBP18.49■□□□□ 0.55
SNAPC4-201ENST00000298532 USP37Q86T82 979 aa18.49■□□□□ 0.55
SNAPC4-201ENST00000298532 PPFIBP2Q8ND30 876 aa18.49■□□□□ 0.55
SNAPC4-201ENST00000298532 JAKMIP2Q96AA8 810 aa18.49■□□□□ 0.55
SNAPC4-201ENST00000298532 FERMT2Q96AC1 680 aa18.49■□□□□ 0.55
SNAPC4-201ENST00000298532 NFE2L3Q9Y4A8 694 aa18.49■□□□□ 0.55
SNAPC4-201ENST00000298532 NAPAP54920 295 aa18.48■□□□□ 0.55
SNAPC4-201ENST00000298532 CALCOCO2Q13137 446 aa18.48■□□□□ 0.55
SNAPC4-201ENST00000298532 XPO4Q9C0E2 1151 aaKnown RBP18.48■□□□□ 0.55
SNAPC4-201ENST00000298532 KCNK9Q9NPC2 374 aa18.48■□□□□ 0.55
SNAPC4-201ENST00000298532 CTNND2Q9UQB3 1225 aa18.48■□□□□ 0.55
SNAPC4-201ENST00000298532 ERCC6L2Q5T890 1561 aa18.48■□□□□ 0.55
SNAPC4-201ENST00000298532 FAM98CQ17RN3 349 aaKnown RBP18.48■□□□□ 0.55
SNAPC4-201ENST00000298532 C6orf50Q9HD87 102 aa18.48■□□□□ 0.55
SNAPC4-201ENST00000298532 SYNRGQ9UMZ2 1314 aa18.48■□□□□ 0.55
SNAPC4-201ENST00000298532 HOXB7P09629 217 aa18.48■□□□□ 0.55
SNAPC4-201ENST00000298532 TSPY3P0CV98 308 aa18.48■□□□□ 0.55
SNAPC4-201ENST00000298532 TSPY8P0CW00 308 aa18.48■□□□□ 0.55
SNAPC4-201ENST00000298532 MCM7P33993 719 aa18.48■□□□□ 0.55
SNAPC4-201ENST00000298532 ZNF219Q9P2Y4 722 aaPredicted RBP18.48■□□□□ 0.55
SNAPC4-201ENST00000298532 CLNS1AP54105 237 aaKnown RBP18.48■□□□□ 0.55
SNAPC4-201ENST00000298532 LRRC45Q96CN5 670 aa18.48■□□□□ 0.55
SNAPC4-201ENST00000298532 TRIM7Q9C029 511 aa18.48■□□□□ 0.55
SNAPC4-201ENST00000298532 CCDC160A6NGH7 325 aa18.47■□□□□ 0.55
SNAPC4-201ENST00000298532 VIMP08670 466 aaKnown RBP18.47■□□□□ 0.55
SNAPC4-201ENST00000298532 SLC39A6Q13433 755 aa18.47■□□□□ 0.55
SNAPC4-201ENST00000298532 CABP5Q9NP86 173 aa18.47■□□□□ 0.55
SNAPC4-201ENST00000298532 TRIM35Q9UPQ4 493 aa18.47■□□□□ 0.55
SNAPC4-201ENST00000298532 GIGYF1O75420 1035 aaPredicted RBP18.47■□□□□ 0.55
SNAPC4-201ENST00000298532 RUFY4Q6ZNE9 571 aa18.47■□□□□ 0.55
SNAPC4-201ENST00000298532 SREK1Q8WXA9 508 aaKnown RBP18.47■□□□□ 0.55
SNAPC4-201ENST00000298532 RXRAP19793 462 aa18.47■□□□□ 0.55
SNAPC4-201ENST00000298532 INTS8Q75QN2 995 aaKnown RBP18.47■□□□□ 0.55
SNAPC4-201ENST00000298532 G2E3Q7L622 706 aa18.47■□□□□ 0.55
SNAPC4-201ENST00000298532 JDP2Q8WYK2 163 aa18.47■□□□□ 0.55
SNAPC4-201ENST00000298532 NOC4LQ9BVI4 516 aaKnown RBP18.47■□□□□ 0.55
SNAPC4-201ENST00000298532 CPSF2Q9P2I0 782 aaKnown RBP18.47■□□□□ 0.55
SNAPC4-201ENST00000298532 HLA-DOAP06340 250 aa18.47■□□□□ 0.55
SNAPC4-201ENST00000298532 MRFAP1L1Q96HT8 127 aa18.47■□□□□ 0.55
SNAPC4-201ENST00000298532 TSNARE1Q96NA8 513 aa18.47■□□□□ 0.55
SNAPC4-201ENST00000298532 MTUS1Q9ULD2 1270 aa18.47■□□□□ 0.55
SNAPC4-201ENST00000298532 VWA3AA6NCI4 1184 aa18.46■□□□□ 0.55
SNAPC4-201ENST00000298532 ALDH3A1P30838 453 aa18.46■□□□□ 0.55
SNAPC4-201ENST00000298532 ETF1P62495 437 aaKnown RBP18.46■□□□□ 0.55
SNAPC4-201ENST00000298532 ATP11AP98196 1134 aa18.46■□□□□ 0.55
SNAPC4-201ENST00000298532 LRMPQ12912 555 aa18.46■□□□□ 0.55
SNAPC4-201ENST00000298532 MTX1Q13505 466 aa18.46■□□□□ 0.55
SNAPC4-201ENST00000298532 DAAM2Q86T65 1068 aa18.46■□□□□ 0.55
SNAPC4-201ENST00000298532 OGFOD1Q8N543 542 aa18.46■□□□□ 0.55
SNAPC4-201ENST00000298532 KIAA1524Q8TCG1 905 aa18.46■□□□□ 0.55
SNAPC4-201ENST00000298532 SECISBP2LQ93073 1101 aaKnown RBP18.46■□□□□ 0.55
SNAPC4-201ENST00000298532 CABS1Q96KC9 395 aa18.46■□□□□ 0.55
SNAPC4-201ENST00000298532 IBTKQ9P2D0 1353 aaPredicted RBP18.46■□□□□ 0.55
SNAPC4-201ENST00000298532 EFCAB8A8MWE9 144 aa18.46■□□□□ 0.55
SNAPC4-201ENST00000298532 GNPATO15228 680 aa18.46■□□□□ 0.55
SNAPC4-201ENST00000298532 SSH2Q76I76 1423 aa18.46■□□□□ 0.55
SNAPC4-201ENST00000298532 RPGRIP1Q96KN7 1286 aa18.46■□□□□ 0.55
SNAPC4-201ENST00000298532 FERMT1Q9BQL6 677 aa18.46■□□□□ 0.55
SNAPC4-201ENST00000298532 ANKRD2Q9GZV1 360 aa18.46■□□□□ 0.55
SNAPC4-201ENST00000298532 NKIRAS1Q9NYS0 192 aa18.46■□□□□ 0.55
SNAPC4-201ENST00000298532 NUP58Q9BVL2 599 aa18.46■□□□□ 0.55
SNAPC4-201ENST00000298532 KIF24Q5T7B8 1368 aa18.46■□□□□ 0.55
SNAPC4-201ENST00000298532 FERP16591 822 aa18.46■□□□□ 0.55
SNAPC4-201ENST00000298532 ATP5DP30049 168 aa18.46■□□□□ 0.55
SNAPC4-201ENST00000298532 KRT9P35527 623 aa18.46■□□□□ 0.55
SNAPC4-201ENST00000298532 CCDC25Q86WR0 208 aa18.46■□□□□ 0.55
SNAPC4-201ENST00000298532 NAP1L3Q99457 506 aaPredicted RBP18.46■□□□□ 0.55
SNAPC4-201ENST00000298532 SERPINA10Q9UK55 444 aa18.45■□□□□ 0.54
SNAPC4-201ENST00000298532 GSTA5Q7RTV2 222 aa18.45■□□□□ 0.54
SNAPC4-201ENST00000298532 FMNL3Q8IVF7 1028 aa18.45■□□□□ 0.54
SNAPC4-201ENST00000298532 BICC1Q9H694 974 aaKnown RBP18.45■□□□□ 0.54
SNAPC4-201ENST00000298532 NCOA5Q9HCD5 579 aaKnown RBP18.45■□□□□ 0.54
SNAPC4-201ENST00000298532 POLR2DO15514 142 aaKnown RBP18.45■□□□□ 0.54
SNAPC4-201ENST00000298532 ZNF804AQ7Z570 1209 aa18.45■□□□□ 0.54
SNAPC4-201ENST00000298532 TMEM87BQ96K49 555 aa18.45■□□□□ 0.54
SNAPC4-201ENST00000298532 LMNTD2Q8IXW0 634 aa18.45■□□□□ 0.54
SNAPC4-201ENST00000298532 GCC2Q8IWJ2 1684 aa18.44■□□□□ 0.54
SNAPC4-201ENST00000298532 ERVV-2B6SEH9 535 aa18.44■□□□□ 0.54
SNAPC4-201ENST00000298532 MAP2K2P36507 400 aa18.44■□□□□ 0.54
SNAPC4-201ENST00000298532 PAK2Q13177 524 aa18.44■□□□□ 0.54
SNAPC4-201ENST00000298532 GSPT1P15170 499 aaKnown RBP18.44■□□□□ 0.54
SNAPC4-201ENST00000298532 PKP1Q13835 747 aa18.44■□□□□ 0.54
SNAPC4-201ENST00000298532 LRRC8AQ8IWT6 810 aa18.44■□□□□ 0.54
SNAPC4-201ENST00000298532 RBM17Q96I25 401 aaKnown RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms