RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 ADAMTS13Q76LX8 1427 aa15.28■□□□□ 0.04
SCAF4-201ENST00000286835 CTDSPL2Q05D32 466 aa15.28■□□□□ 0.04
SCAF4-201ENST00000286835 CHMP4BP1P59074 171 aa15.28■□□□□ 0.04
SCAF4-201ENST00000286835 IGSF22Q8N9C0 903 aa15.28■□□□□ 0.04
SCAF4-201ENST00000286835 ERBB3P21860 1342 aa15.28■□□□□ 0.04
SCAF4-201ENST00000286835 EFCAB8A8MWE9 144 aa15.28■□□□□ 0.04
SCAF4-201ENST00000286835 EXOSC10Q01780 885 aaKnown RBP15.28■□□□□ 0.04
SCAF4-201ENST00000286835 SPECC1LQ69YQ0 1117 aa15.28■□□□□ 0.04
SCAF4-201ENST00000286835 GDAP1L1Q96MZ0 367 aa15.28■□□□□ 0.04
SCAF4-201ENST00000286835 ACBD3Q9H3P7 528 aa15.28■□□□□ 0.04
SCAF4-201ENST00000286835 LRP2BPQ9P2M1 347 aa15.28■□□□□ 0.04
SCAF4-201ENST00000286835 SH3TC1Q8TE82 1336 aa15.28■□□□□ 0.04
SCAF4-201ENST00000286835 TUBB4AP04350 444 aa15.27■□□□□ 0.04
SCAF4-201ENST00000286835 PDIA6Q15084 440 aa15.27■□□□□ 0.04
SCAF4-201ENST00000286835 POSTNQ15063 836 aa15.27■□□□□ 0.03
SCAF4-201ENST00000286835 WASF1Q92558 559 aa15.27■□□□□ 0.03
SCAF4-201ENST00000286835 WDR24Q96S15 920 aa15.27■□□□□ 0.03
SCAF4-201ENST00000286835 RSPH14Q9UHP6 348 aa15.27■□□□□ 0.03
SCAF4-201ENST00000286835 AKR1B15C9JRZ8 316 aaPredicted RBP15.27■□□□□ 0.03
SCAF4-201ENST00000286835 PHKG2P15735 406 aa15.27■□□□□ 0.03
SCAF4-201ENST00000286835 ZSCAN26Q16670 478 aa15.27■□□□□ 0.03
SCAF4-201ENST00000286835 SLC4A8Q2Y0W8 1093 aa15.27■□□□□ 0.03
SCAF4-201ENST00000286835 TOGARAM2Q6ZUX3 1019 aa15.27■□□□□ 0.03
SCAF4-201ENST00000286835 NACAP1Q9BZK3 213 aa15.27■□□□□ 0.03
SCAF4-201ENST00000286835 SAMSN1Q9NSI8 373 aaKnown RBP15.27■□□□□ 0.03
SCAF4-201ENST00000286835 DENND2AQ9ULE3 1009 aa15.27■□□□□ 0.03
SCAF4-201ENST00000286835 ZNF652Q9Y2D9 606 aa15.27■□□□□ 0.03
SCAF4-201ENST00000286835 IGHMBP2P38935 993 aaKnown RBP15.26■□□□□ 0.03
SCAF4-201ENST00000286835 COL15A1P39059 1388 aa15.26■□□□□ 0.03
SCAF4-201ENST00000286835 MFSD6Q6ZSS7 791 aa15.26■□□□□ 0.03
SCAF4-201ENST00000286835 MIGA1Q8NAN2 632 aa15.26■□□□□ 0.03
SCAF4-201ENST00000286835 HINFPQ9BQA5 517 aa15.26■□□□□ 0.03
SCAF4-201ENST00000286835 PARD6BQ9BYG5 372 aa15.26■□□□□ 0.03
SCAF4-201ENST00000286835 RTN1Q16799 776 aa15.26■□□□□ 0.03
SCAF4-201ENST00000286835 VPS16Q9H269 839 aa15.26■□□□□ 0.03
SCAF4-201ENST00000286835 ZNF446Q9NWS9 450 aa15.26■□□□□ 0.03
SCAF4-201ENST00000286835 GUCA1BQ9UMX6 200 aa15.26■□□□□ 0.03
SCAF4-201ENST00000286835 PTPRUQ92729 1446 aa15.26■□□□□ 0.03
SCAF4-201ENST00000286835 ILDR1Q86SU0 546 aaPredicted RBP15.26■□□□□ 0.03
SCAF4-201ENST00000286835 DNAJC10Q8IXB1 793 aa15.26■□□□□ 0.03
SCAF4-201ENST00000286835 SMYD4Q8IYR2 804 aaPredicted RBP15.26■□□□□ 0.03
SCAF4-201ENST00000286835 CAPZA3Q96KX2 299 aa15.26■□□□□ 0.03
SCAF4-201ENST00000286835 BRMS1Q9HCU9 246 aa15.26■□□□□ 0.03
SCAF4-201ENST00000286835 NAP1L1P55209 391 aaKnown RBP15.25■□□□□ 0.03
SCAF4-201ENST00000286835 ST5P78524 1137 aa15.25■□□□□ 0.03
SCAF4-201ENST00000286835 NOM1Q5C9Z4 860 aaKnown RBP15.25■□□□□ 0.03
SCAF4-201ENST00000286835 RANBP6O60518 1105 aaKnown RBP15.25■□□□□ 0.03
SCAF4-201ENST00000286835 WTAPQ15007 396 aa15.25■□□□□ 0.03
SCAF4-201ENST00000286835 WWC2Q6AWC2 1192 aa15.25■□□□□ 0.03
SCAF4-201ENST00000286835 VSTM4Q8IW00 320 aa15.25■□□□□ 0.03
SCAF4-201ENST00000286835 SOWAHDA6NJG2 315 aa15.25■□□□□ 0.03
SCAF4-201ENST00000286835 CUTAO60888 179 aa15.25■□□□□ 0.03
SCAF4-201ENST00000286835 CASP1P29466 404 aa15.25■□□□□ 0.03
SCAF4-201ENST00000286835 IRX5P78411 483 aaPredicted RBP15.25■□□□□ 0.03
SCAF4-201ENST00000286835 MTF1Q14872 753 aa15.25■□□□□ 0.03
SCAF4-201ENST00000286835 GPIHBP1Q8IV16 184 aa15.25■□□□□ 0.03
SCAF4-201ENST00000286835 CTAGE9A4FU28 777 aa15.25■□□□□ 0.03
SCAF4-201ENST00000286835 SCARF1Q14162 830 aa15.25■□□□□ 0.03
SCAF4-201ENST00000286835 GPR161Q8N6U8 529 aaKnown RBP15.25■□□□□ 0.03
SCAF4-201ENST00000286835 RABEP2Q9H5N1 569 aa15.25■□□□□ 0.03
SCAF4-201ENST00000286835 CTAGE15A4D2H0 777 aa15.24■□□□□ 0.03
SCAF4-201ENST00000286835 UBE2Q2LH0YL09 131 aa15.24■□□□□ 0.03
SCAF4-201ENST00000286835 CTAGE8P0CG41 777 aa15.24■□□□□ 0.03
SCAF4-201ENST00000286835 RRAGBQ5VZM2 374 aa15.24■□□□□ 0.03
SCAF4-201ENST00000286835 KIAA1328Q86T90 577 aa15.24■□□□□ 0.03
SCAF4-201ENST00000286835 CTAGE6Q86UF2 777 aa15.24■□□□□ 0.03
SCAF4-201ENST00000286835 CTAGE4Q8IX94 777 aa15.24■□□□□ 0.03
SCAF4-201ENST00000286835 CEP131Q9UPN4 1083 aa15.24■□□□□ 0.03
SCAF4-201ENST00000286835 MROH7-TTC4A0A0A0MT08 1334 aa15.24■□□□□ 0.03
SCAF4-201ENST00000286835 IKBKBO14920 756 aa15.24■□□□□ 0.03
SCAF4-201ENST00000286835 SHC4Q6S5L8 630 aa15.24■□□□□ 0.03
SCAF4-201ENST00000286835 MAGEB6Q8N7X4 407 aa15.24■□□□□ 0.03
SCAF4-201ENST00000286835 PDE11AQ9HCR9 933 aa15.24■□□□□ 0.03
SCAF4-201ENST00000286835 PHLPP2Q6ZVD8 1323 aa15.24■□□□□ 0.03
SCAF4-201ENST00000286835 RFX5P48382 616 aaPredicted RBP15.24■□□□□ 0.03
SCAF4-201ENST00000286835 ANKRD18BA2A2Z9 1011 aa15.23■□□□□ 0.03
SCAF4-201ENST00000286835 MBD4O95243 580 aa15.23■□□□□ 0.03
SCAF4-201ENST00000286835 NR5A1Q13285 461 aa15.23■□□□□ 0.03
SCAF4-201ENST00000286835 DZIP3Q86Y13 1208 aaKnown RBP15.23■□□□□ 0.03
SCAF4-201ENST00000286835 ARMT1Q9H993 441 aa15.23■□□□□ 0.03
SCAF4-201ENST00000286835 ZNF532Q9HCE3 1301 aa15.23■□□□□ 0.03
SCAF4-201ENST00000286835 ANKRD65E5RJM6 399 aa15.23■□□□□ 0.03
SCAF4-201ENST00000286835 DNA2P51530 1060 aa15.23■□□□□ 0.03
SCAF4-201ENST00000286835 MAP3K12Q12852 859 aa15.23■□□□□ 0.03
SCAF4-201ENST00000286835 APOA5Q6Q788 366 aa15.23■□□□□ 0.03
SCAF4-201ENST00000286835 FHOD1Q9Y613 1164 aa15.23■□□□□ 0.03
SCAF4-201ENST00000286835 MATR3P43243 847 aaKnown RBP eCLIP15.23■□□□□ 0.03
SCAF4-201ENST00000286835 PLA2G4AP47712 749 aa15.23■□□□□ 0.03
SCAF4-201ENST00000286835 EIF5P55010 431 aaKnown RBP15.23■□□□□ 0.03
SCAF4-201ENST00000286835 LONRF2Q1L5Z9 754 aa15.23■□□□□ 0.03
SCAF4-201ENST00000286835 TECPR2O15040 1411 aa15.23■□□□□ 0.03
SCAF4-201ENST00000286835 ZNF174Q15697 407 aa15.22■□□□□ 0.03
SCAF4-201ENST00000286835 FKBP15Q5T1M5 1219 aa15.22■□□□□ 0.03
SCAF4-201ENST00000286835 EEF2KMTQ96G04 330 aa15.22■□□□□ 0.03
SCAF4-201ENST00000286835 PEAK1Q9H792 1746 aa15.22■□□□□ 0.03
SCAF4-201ENST00000286835 SF3B2Q13435 895 aaKnown RBP15.22■□□□□ 0.03
SCAF4-201ENST00000286835 CCDC70Q6NSX1 233 aa15.22■□□□□ 0.03
SCAF4-201ENST00000286835 VWA3AA6NCI4 1184 aa15.22■□□□□ 0.03
SCAF4-201ENST00000286835 TADA3O75528 432 aa15.22■□□□□ 0.03
SCAF4-201ENST00000286835 FAM182BQ5T319 152 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms