RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 PYCARDQ9ULZ3 195 aa18.43■□□□□ 0.54
SH3RF1-201ENST00000284637 USP19O94966 1318 aa18.43■□□□□ 0.54
SH3RF1-201ENST00000284637 SPDYE3A6NKU9 549 aa18.43■□□□□ 0.54
SH3RF1-201ENST00000284637 EFCAB8A8MWE9 144 aa18.43■□□□□ 0.54
SH3RF1-201ENST00000284637 BUB1BO60566 1050 aaPredicted RBP18.43■□□□□ 0.54
SH3RF1-201ENST00000284637 VIMP08670 466 aaKnown RBP18.43■□□□□ 0.54
SH3RF1-201ENST00000284637 GCKP35557 465 aa18.43■□□□□ 0.54
SH3RF1-201ENST00000284637 SV2BQ7L1I2 683 aa18.43■□□□□ 0.54
SH3RF1-201ENST00000284637 CSGALNACT2Q8N6G5 542 aa18.43■□□□□ 0.54
SH3RF1-201ENST00000284637 CCDC63Q8NA47 563 aa18.43■□□□□ 0.54
SH3RF1-201ENST00000284637 CABLES1Q8TDN4 633 aa18.43■□□□□ 0.54
SH3RF1-201ENST00000284637 SMC6Q96SB8 1091 aa18.43■□□□□ 0.54
SH3RF1-201ENST00000284637 KIAA1524Q8TCG1 905 aa18.43■□□□□ 0.54
SH3RF1-201ENST00000284637 TAB2Q9NYJ8 693 aa18.43■□□□□ 0.54
SH3RF1-201ENST00000284637 SYCP2Q9BX26 1530 aa18.43■□□□□ 0.54
SH3RF1-201ENST00000284637 SETDB2Q96T68 719 aa18.43■□□□□ 0.54
SH3RF1-201ENST00000284637 FERP16591 822 aa18.43■□□□□ 0.54
SH3RF1-201ENST00000284637 TRIM14Q14142 442 aa18.43■□□□□ 0.54
SH3RF1-201ENST00000284637 LMNTD2Q8IXW0 634 aa18.43■□□□□ 0.54
SH3RF1-201ENST00000284637 WDR66Q8TBY9 1149 aa18.43■□□□□ 0.54
SH3RF1-201ENST00000284637 SIRT1Q96EB6 747 aa18.43■□□□□ 0.54
SH3RF1-201ENST00000284637 TMEM87BQ96K49 555 aa18.43■□□□□ 0.54
SH3RF1-201ENST00000284637 PALD1Q9ULE6 856 aa18.43■□□□□ 0.54
SH3RF1-201ENST00000284637 HOXC9P31274 260 aa18.42■□□□□ 0.54
SH3RF1-201ENST00000284637 ATP10BO94823 1461 aa18.42■□□□□ 0.54
SH3RF1-201ENST00000284637 PPFIA1Q13136 1202 aa18.42■□□□□ 0.54
SH3RF1-201ENST00000284637 ZNF594Q96JF6 807 aaPredicted RBP18.42■□□□□ 0.54
SH3RF1-201ENST00000284637 GDAP1L1Q96MZ0 367 aa18.42■□□□□ 0.54
SH3RF1-201ENST00000284637 SLF1Q9BQI6 1058 aa18.42■□□□□ 0.54
SH3RF1-201ENST00000284637 ZNF608Q9ULD9 1512 aaPredicted RBP18.42■□□□□ 0.54
SH3RF1-201ENST00000284637 GPAA1O43292 621 aa18.42■□□□□ 0.54
SH3RF1-201ENST00000284637 ERCC3P19447 782 aa18.42■□□□□ 0.54
SH3RF1-201ENST00000284637 STAMQ92783 540 aa18.42■□□□□ 0.54
SH3RF1-201ENST00000284637 TCHPQ9BT92 498 aa18.42■□□□□ 0.54
SH3RF1-201ENST00000284637 URB2Q14146 1524 aaKnown RBP18.42■□□□□ 0.54
SH3RF1-201ENST00000284637 PRDM1O75626 825 aa18.42■□□□□ 0.54
SH3RF1-201ENST00000284637 KRT40Q6A162 431 aa18.42■□□□□ 0.54
SH3RF1-201ENST00000284637 NGLY1Q96IV0 654 aa18.42■□□□□ 0.54
SH3RF1-201ENST00000284637 ARMT1Q9H993 441 aa18.42■□□□□ 0.54
SH3RF1-201ENST00000284637 EIF2AK4Q9P2K8 1649 aaKnown RBP18.41■□□□□ 0.54
SH3RF1-201ENST00000284637 ABCC1P33527 1531 aa18.41■□□□□ 0.54
SH3RF1-201ENST00000284637 PLCD1P51178 756 aa18.41■□□□□ 0.54
SH3RF1-201ENST00000284637 HNRNPH2P55795 449 aaKnown RBP18.41■□□□□ 0.54
SH3RF1-201ENST00000284637 PAK1Q13153 545 aa18.41■□□□□ 0.54
SH3RF1-201ENST00000284637 CAPN7Q9Y6W3 813 aa18.41■□□□□ 0.54
SH3RF1-201ENST00000284637 GOLGA6BA6NDN3 693 aa18.41■□□□□ 0.54
SH3RF1-201ENST00000284637 ETF1P62495 437 aaKnown RBP18.41■□□□□ 0.54
SH3RF1-201ENST00000284637 TMTC1Q8IUR5 882 aa18.41■□□□□ 0.54
SH3RF1-201ENST00000284637 CCDC26Q8TAB7 109 aa18.41■□□□□ 0.54
SH3RF1-201ENST00000284637 SETSIPP0DME0 302 aa18.41■□□□□ 0.54
SH3RF1-201ENST00000284637 SETDB1Q15047 1291 aa18.41■□□□□ 0.54
SH3RF1-201ENST00000284637 ICE2Q659A1 982 aa18.41■□□□□ 0.54
SH3RF1-201ENST00000284637 ADKP55263 362 aaKnown RBP18.4■□□□□ 0.54
SH3RF1-201ENST00000284637 CEP85LQ5SZL2 805 aa18.4■□□□□ 0.54
SH3RF1-201ENST00000284637 KBTBD3Q8NAB2 608 aa18.4■□□□□ 0.54
SH3RF1-201ENST00000284637 SUCLG2Q96I99 432 aa18.4■□□□□ 0.54
SH3RF1-201ENST00000284637 TRIM31Q9BZY9 425 aa18.4■□□□□ 0.54
SH3RF1-201ENST00000284637 MTUS1Q9ULD2 1270 aa18.4■□□□□ 0.54
SH3RF1-201ENST00000284637 TNRQ92752 1358 aa18.4■□□□□ 0.54
SH3RF1-201ENST00000284637 NR1I2O75469 434 aa18.4■□□□□ 0.54
SH3RF1-201ENST00000284637 TTC16Q8NEE8 873 aa18.4■□□□□ 0.54
SH3RF1-201ENST00000284637 APPBP2Q92624 585 aa18.4■□□□□ 0.54
SH3RF1-201ENST00000284637 SECISBP2LQ93073 1101 aaKnown RBP18.4■□□□□ 0.54
SH3RF1-201ENST00000284637 NPC1L1Q9UHC9 1359 aa18.4■□□□□ 0.54
SH3RF1-201ENST00000284637 NUP153P49790 1475 aaKnown RBP18.4■□□□□ 0.54
SH3RF1-201ENST00000284637 ARHGEF12Q9NZN5 1544 aa18.4■□□□□ 0.54
SH3RF1-201ENST00000284637 POSTNQ15063 836 aa18.4■□□□□ 0.54
SH3RF1-201ENST00000284637 BEND3Q5T5X7 828 aa18.4■□□□□ 0.54
SH3RF1-201ENST00000284637 EFCAB13Q8IY85 973 aa18.4■□□□□ 0.54
SH3RF1-201ENST00000284637 LIG3P49916 1009 aa18.4■□□□□ 0.54
SH3RF1-201ENST00000284637 EDC3Q96F86 508 aaKnown RBP18.4■□□□□ 0.54
SH3RF1-201ENST00000284637 CABS1Q96KC9 395 aa18.4■□□□□ 0.54
SH3RF1-201ENST00000284637 IFT74Q96LB3 600 aa18.4■□□□□ 0.54
SH3RF1-201ENST00000284637 PLCH2O75038 1416 aa18.4■□□□□ 0.54
SH3RF1-201ENST00000284637 XAGE2Q96GT9 111 aa18.39■□□□□ 0.54
SH3RF1-201ENST00000284637 IMPG2Q9BZV3 1241 aa18.39■□□□□ 0.53
SH3RF1-201ENST00000284637 KCNJ14Q9UNX9 436 aa18.39■□□□□ 0.53
SH3RF1-201ENST00000284637 SEC62Q99442 399 aaKnown RBP18.39■□□□□ 0.53
SH3RF1-201ENST00000284637 METTL22Q9BUU2 404 aaPredicted RBP18.39■□□□□ 0.53
SH3RF1-201ENST00000284637 BLMP54132 1417 aaPredicted RBP18.39■□□□□ 0.53
SH3RF1-201ENST00000284637 BIVM-ERCC5R4GMW8 1640 aa18.39■□□□□ 0.53
SH3RF1-201ENST00000284637 HGSO14964 777 aaPredicted RBP18.39■□□□□ 0.53
SH3RF1-201ENST00000284637 PNOCQ13519 176 aa18.39■□□□□ 0.53
SH3RF1-201ENST00000284637 SPATS2Q86XZ4 545 aaKnown RBP18.39■□□□□ 0.53
SH3RF1-201ENST00000284637 CCDC65Q8IXS2 484 aa18.39■□□□□ 0.53
SH3RF1-201ENST00000284637 DCAF5Q96JK2 942 aa18.39■□□□□ 0.53
SH3RF1-201ENST00000284637 VEZTQ9HBM0 779 aa18.39■□□□□ 0.53
SH3RF1-201ENST00000284637 RPL13P26373 211 aaKnown RBP18.38■□□□□ 0.53
SH3RF1-201ENST00000284637 PCK1P35558 622 aa18.38■□□□□ 0.53
SH3RF1-201ENST00000284637 DPH6Q7L8W6 267 aa18.38■□□□□ 0.53
SH3RF1-201ENST00000284637 ZBTB21Q9ULJ3 1066 aa18.38■□□□□ 0.53
SH3RF1-201ENST00000284637 TRAF1Q13077 416 aa18.38■□□□□ 0.53
SH3RF1-201ENST00000284637 TTC38Q5R3I4 469 aa18.38■□□□□ 0.53
SH3RF1-201ENST00000284637 APBB1IPQ7Z5R6 666 aaPredicted RBP18.38■□□□□ 0.53
SH3RF1-201ENST00000284637 CADPS2Q86UW7 1296 aa18.38■□□□□ 0.53
SH3RF1-201ENST00000284637 TCOF1Q13428 1488 aaKnown RBP18.38■□□□□ 0.53
SH3RF1-201ENST00000284637 GCP02774 474 aa18.38■□□□□ 0.53
SH3RF1-201ENST00000284637 MYCNP04198 464 aaPredicted RBP18.38■□□□□ 0.53
SH3RF1-201ENST00000284637 SND1Q7KZF4 910 aaKnown RBP eCLIP18.38■□□□□ 0.53
SH3RF1-201ENST00000284637 SREK1Q8WXA9 508 aaKnown RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms