RNA–Protein interactions for RNA: ENST00000272930.8

UBE2F-201, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2F, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-201ENST00000272930 CAMK4Q16566 473 aa23.54■■□□□ 1.36
UBE2F-201ENST00000272930 RRP12Q5JTH9 1297 aaKnown RBP23.54■■□□□ 1.36
UBE2F-201ENST00000272930 GJB4Q9NTQ9 266 aa23.54■■□□□ 1.36
UBE2F-201ENST00000272930 DLEC1Q9Y238 1755 aa23.54■■□□□ 1.36
UBE2F-201ENST00000272930 MECOMQ03112 1051 aa23.54■■□□□ 1.36
UBE2F-201ENST00000272930 SLC27A3Q5K4L6 730 aa23.54■■□□□ 1.36
UBE2F-201ENST00000272930 TXNRD3Q86VQ6 643 aa23.54■■□□□ 1.36
UBE2F-201ENST00000272930 TMTC2Q8N394 836 aa23.54■■□□□ 1.36
UBE2F-201ENST00000272930 ALG1Q9BT22 464 aa23.54■■□□□ 1.36
UBE2F-201ENST00000272930 QTRT2Q9H974 415 aaKnown RBP23.54■■□□□ 1.36
UBE2F-201ENST00000272930 RANBP6O60518 1105 aaKnown RBP23.53■■□□□ 1.36
UBE2F-201ENST00000272930 RCAN1P53805 252 aa23.53■■□□□ 1.36
UBE2F-201ENST00000272930 WTAPQ15007 396 aa23.53■■□□□ 1.36
UBE2F-201ENST00000272930 MYL10Q9BUA6 226 aa23.53■■□□□ 1.36
UBE2F-201ENST00000272930 TOMM22Q9NS69 142 aa23.53■■□□□ 1.36
UBE2F-201ENST00000272930 POLR3EQ9NVU0 708 aa23.53■■□□□ 1.36
UBE2F-201ENST00000272930 MINDY4BA8MYZ0 360 aa23.52■■□□□ 1.36
UBE2F-201ENST00000272930 IARSP41252 1262 aaKnown RBP23.52■■□□□ 1.36
UBE2F-201ENST00000272930 MYSM1Q5VVJ2 828 aa23.52■■□□□ 1.36
UBE2F-201ENST00000272930 PRR5LQ6MZQ0 368 aa23.52■■□□□ 1.36
UBE2F-201ENST00000272930 SYNE3Q6ZMZ3 975 aa23.52■■□□□ 1.36
UBE2F-201ENST00000272930 ZSCAN30Q86W11 494 aa23.52■■□□□ 1.36
UBE2F-201ENST00000272930 LEMD3Q9Y2U8 911 aa23.52■■□□□ 1.36
UBE2F-201ENST00000272930 KIF28PB7ZC32 967 aa23.52■■□□□ 1.36
UBE2F-201ENST00000272930 GYS1P13807 737 aa23.52■■□□□ 1.36
UBE2F-201ENST00000272930 CCAR1Q8IX12 1150 aaKnown RBP23.52■■□□□ 1.36
UBE2F-201ENST00000272930 CCDC144CPQ8IYA2 1237 aa23.52■■□□□ 1.36
UBE2F-201ENST00000272930 PHKBQ93100 1093 aa23.52■■□□□ 1.36
UBE2F-201ENST00000272930 ERICH2A1L162 156 aa23.51■■□□□ 1.35
UBE2F-201ENST00000272930 YEATS4O95619 227 aa23.51■■□□□ 1.35
UBE2F-201ENST00000272930 FGRP09769 529 aa23.51■■□□□ 1.35
UBE2F-201ENST00000272930 PCP11498 1178 aaKnown RBP23.51■■□□□ 1.35
UBE2F-201ENST00000272930 IFNAR1P17181 557 aa23.51■■□□□ 1.35
UBE2F-201ENST00000272930 TYRO3Q06418 890 aa23.51■■□□□ 1.35
UBE2F-201ENST00000272930 LINC00301Q8NCQ3 95 aa23.51■■□□□ 1.35
UBE2F-201ENST00000272930 ESR2Q92731 530 aa23.51■■□□□ 1.35
UBE2F-201ENST00000272930 AIFM3Q96NN9 605 aa23.51■■□□□ 1.35
UBE2F-201ENST00000272930 MYH6P13533 1939 aa23.51■■□□□ 1.35
UBE2F-201ENST00000272930 IGSF3O75054 1194 aa23.5■■□□□ 1.35
UBE2F-201ENST00000272930 POLR3DP05423 398 aaPredicted RBP23.5■■□□□ 1.35
UBE2F-201ENST00000272930 ZKSCAN3Q9BRR0 538 aa23.5■■□□□ 1.35
UBE2F-201ENST00000272930 MRVI1Q9Y6F6 885 aa23.5■■□□□ 1.35
UBE2F-201ENST00000272930 PRDX5P30044 214 aa23.5■■□□□ 1.35
UBE2F-201ENST00000272930 SEC23AQ15436 765 aa23.5■■□□□ 1.35
UBE2F-201ENST00000272930 CRY2Q49AN0 593 aa23.5■■□□□ 1.35
UBE2F-201ENST00000272930 KRT40Q6A162 431 aa23.5■■□□□ 1.35
UBE2F-201ENST00000272930 CKAP2LQ8IYA6 745 aa23.5■■□□□ 1.35
UBE2F-201ENST00000272930 EP400Q96L91 3159 aa23.5■■□□□ 1.35
UBE2F-201ENST00000272930 XDHP47989 1333 aa23.5■■□□□ 1.35
UBE2F-201ENST00000272930 FMNL1O95466 1100 aaPredicted RBP23.49■■□□□ 1.35
UBE2F-201ENST00000272930 CHAF1AQ13111 956 aaPredicted RBP23.49■■□□□ 1.35
UBE2F-201ENST00000272930 STK11IPQ8N1F8 1099 aa23.49■■□□□ 1.35
UBE2F-201ENST00000272930 ENGASEQ8NFI3 743 aa23.49■■□□□ 1.35
UBE2F-201ENST00000272930 GOLPH3LQ9H4A5 285 aa23.49■■□□□ 1.35
UBE2F-201ENST00000272930 PCDHA7Q9UN72 937 aa23.49■■□□□ 1.35
UBE2F-201ENST00000272930 SMIM22K7EJ46 135 aa23.49■■□□□ 1.35
UBE2F-201ENST00000272930 ME1P48163 572 aa23.49■■□□□ 1.35
UBE2F-201ENST00000272930 SNW1Q13573 536 aaKnown RBP23.49■■□□□ 1.35
UBE2F-201ENST00000272930 RTN1Q16799 776 aa23.49■■□□□ 1.35
UBE2F-201ENST00000272930 ADALQ6DHV7 355 aa23.49■■□□□ 1.35
UBE2F-201ENST00000272930 CTR9Q6PD62 1173 aa23.49■■□□□ 1.35
UBE2F-201ENST00000272930 C15orf52Q6ZUT6 534 aaKnown RBP23.49■■□□□ 1.35
UBE2F-201ENST00000272930 KCNG4Q8TDN1 519 aa23.49■■□□□ 1.35
UBE2F-201ENST00000272930 UBAC1Q9BSL1 405 aa23.49■■□□□ 1.35
UBE2F-201ENST00000272930 ANKIB1Q9P2G1 1089 aa23.49■■□□□ 1.35
UBE2F-201ENST00000272930 USP25Q9UHP3 1055 aa23.49■■□□□ 1.35
UBE2F-201ENST00000272930 CLIC4Q9Y696 253 aa23.49■■□□□ 1.35
UBE2F-201ENST00000272930 A0A1W2PQ27 194 aa23.48■■□□□ 1.35
UBE2F-201ENST00000272930 A0A1W2PQ64 194 aa23.48■■□□□ 1.35
UBE2F-201ENST00000272930 A0A1W2PQD8 194 aa23.48■■□□□ 1.35
UBE2F-201ENST00000272930 SSRP1Q08945 709 aaKnown RBP23.48■■□□□ 1.35
UBE2F-201ENST00000272930 CCDC73Q6ZRK6 1079 aa23.48■■□□□ 1.35
UBE2F-201ENST00000272930 FAM200AQ8TCP9 573 aa23.48■■□□□ 1.35
UBE2F-201ENST00000272930 NOL7Q9UMY1 257 aaKnown RBP23.48■■□□□ 1.35
UBE2F-201ENST00000272930 CTAGE5O15320 804 aa23.47■■□□□ 1.35
UBE2F-201ENST00000272930 FAM160A1Q05DH4 1040 aa23.47■■□□□ 1.35
UBE2F-201ENST00000272930 SPTY2D1Q68D10 685 aaPredicted RBP23.47■■□□□ 1.35
UBE2F-201ENST00000272930 CRNKL1Q9BZJ0 848 aaKnown RBP23.47■■□□□ 1.35
UBE2F-201ENST00000272930 CCDC39Q9UFE4 941 aa23.47■■□□□ 1.35
UBE2F-201ENST00000272930 STK38Q15208 465 aa23.47■■□□□ 1.35
UBE2F-201ENST00000272930 KRT27Q7Z3Y8 459 aa23.47■■□□□ 1.35
UBE2F-201ENST00000272930 ZNF654Q8IZM8 581 aa23.47■■□□□ 1.35
UBE2F-201ENST00000272930 WASF1Q92558 559 aa23.47■■□□□ 1.35
UBE2F-201ENST00000272930 SLC26A6Q9BXS9 759 aa23.47■■□□□ 1.35
UBE2F-201ENST00000272930 ATP8A2Q9NTI2 1148 aa23.47■■□□□ 1.35
UBE2F-201ENST00000272930 AATFQ9NY61 560 aaKnown RBP eCLIP23.47■■□□□ 1.35
UBE2F-201ENST00000272930 TNKSO95271 1327 aa23.47■■□□□ 1.35
UBE2F-201ENST00000272930 CYP2D7A0A087X1C5 515 aa23.46■■□□□ 1.35
UBE2F-201ENST00000272930 CCDC196A0A1B0GTZ2 297 aa23.46■■□□□ 1.35
UBE2F-201ENST00000272930 SERPINB2P05120 415 aa23.46■■□□□ 1.35
UBE2F-201ENST00000272930 SLC51AQ86UW1 340 aa23.46■■□□□ 1.35
UBE2F-201ENST00000272930 TDRD7Q8NHU6 1098 aaKnown RBP23.46■■□□□ 1.35
UBE2F-201ENST00000272930 RPGRQ92834 1020 aaKnown RBP23.46■■□□□ 1.35
UBE2F-201ENST00000272930 DCP1AQ9NPI6 582 aaPredicted RBP23.46■■□□□ 1.35
UBE2F-201ENST00000272930 U2AF2P26368 475 aaKnown RBP eCLIP23.45■■□□□ 1.357e-6■■■■□ 23.7
UBE2F-201ENST00000272930 ST5P78524 1137 aa23.45■■□□□ 1.35
UBE2F-201ENST00000272930 ANO1Q5XXA6 986 aa23.45■■□□□ 1.35
UBE2F-201ENST00000272930 NBPF11Q86T75 865 aa23.45■■□□□ 1.35
UBE2F-201ENST00000272930 WDR66Q8TBY9 1149 aa23.45■■□□□ 1.35
UBE2F-201ENST00000272930 USP17L12C9JPN9 530 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms