RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 LCMT1Q9UIC8 334 aa18.43■□□□□ 0.54
MAP1LC3B-201ENST00000268607 ANKRD36CQ5JPF3 1778 aa18.43■□□□□ 0.54
MAP1LC3B-201ENST00000268607 TAF1LQ8IZX4 1826 aa18.42■□□□□ 0.54
MAP1LC3B-201ENST00000268607 KIF2AO00139 706 aaPredicted RBP18.42■□□□□ 0.54
MAP1LC3B-201ENST00000268607 APOBRQ0VD83 1088 aa18.42■□□□□ 0.54
MAP1LC3B-201ENST00000268607 AOPEPQ8N6M6 819 aa18.42■□□□□ 0.54
MAP1LC3B-201ENST00000268607 GOLPH3LQ9H4A5 285 aa18.42■□□□□ 0.54
MAP1LC3B-201ENST00000268607 H3BQV1 296 aa18.42■□□□□ 0.54
MAP1LC3B-201ENST00000268607 CCT2P78371 535 aaKnown RBP18.42■□□□□ 0.54
MAP1LC3B-201ENST00000268607 IFFO2Q5TF58 517 aa18.42■□□□□ 0.54
MAP1LC3B-201ENST00000268607 NBPF11Q86T75 865 aa18.42■□□□□ 0.54
MAP1LC3B-201ENST00000268607 PPP1R13BQ96KQ4 1090 aa18.42■□□□□ 0.54
MAP1LC3B-201ENST00000268607 DHX16O60231 1041 aaKnown RBP18.41■□□□□ 0.54
MAP1LC3B-201ENST00000268607 TEX35Q5T0J7 233 aa18.41■□□□□ 0.54
MAP1LC3B-201ENST00000268607 PUS7LQ9H0K6 701 aaKnown RBP18.41■□□□□ 0.54
MAP1LC3B-201ENST00000268607 KCND1Q9NSA2 647 aa18.41■□□□□ 0.54
MAP1LC3B-201ENST00000268607 RFX7Q2KHR2 1363 aa18.41■□□□□ 0.54
MAP1LC3B-201ENST00000268607 CCDC93Q567U6 631 aa18.41■□□□□ 0.54
MAP1LC3B-201ENST00000268607 GPHNQ9NQX3 736 aaPredicted RBP18.41■□□□□ 0.54
MAP1LC3B-201ENST00000268607 LY75O60449 1722 aa18.41■□□□□ 0.54
MAP1LC3B-201ENST00000268607 E7EWF7 191 aa18.4■□□□□ 0.54
MAP1LC3B-201ENST00000268607 MYO1CO00159 1063 aa18.4■□□□□ 0.54
MAP1LC3B-201ENST00000268607 MCAMP43121 646 aa18.4■□□□□ 0.54
MAP1LC3B-201ENST00000268607 CCDC152Q4G0S7 254 aa18.4■□□□□ 0.54
MAP1LC3B-201ENST00000268607 SMARCE1Q969G3 411 aa18.4■□□□□ 0.54
MAP1LC3B-201ENST00000268607 DSCC1Q9BVC3 393 aa18.4■□□□□ 0.54
MAP1LC3B-201ENST00000268607 ZCCHC17Q9NP64 241 aaKnown RBP18.4■□□□□ 0.54
MAP1LC3B-201ENST00000268607 CFAP45Q9UL16 551 aa18.4■□□□□ 0.54
MAP1LC3B-201ENST00000268607 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.4■□□□□ 0.543e-9■□□□□ 8.9
MAP1LC3B-201ENST00000268607 GSDMDP57764 484 aa18.4■□□□□ 0.54
MAP1LC3B-201ENST00000268607 SCRN1Q12765 414 aa18.4■□□□□ 0.54
MAP1LC3B-201ENST00000268607 MUM1L1Q5H9M0 696 aa18.4■□□□□ 0.54
MAP1LC3B-201ENST00000268607 COL23A1Q86Y22 540 aaPredicted RBP18.4■□□□□ 0.54
MAP1LC3B-201ENST00000268607 TXLNBQ8N3L3 684 aa18.4■□□□□ 0.54
MAP1LC3B-201ENST00000268607 ALDH8A1Q9H2A2 487 aaPredicted RBP18.4■□□□□ 0.54
MAP1LC3B-201ENST00000268607 NCOA5Q9HCD5 579 aaKnown RBP18.4■□□□□ 0.54
MAP1LC3B-201ENST00000268607 TPTE2Q6XPS3 522 aa18.39■□□□□ 0.54
MAP1LC3B-201ENST00000268607 DHX32Q7L7V1 743 aaKnown RBP18.39■□□□□ 0.54
MAP1LC3B-201ENST00000268607 CTAGE5O15320 804 aa18.39■□□□□ 0.53
MAP1LC3B-201ENST00000268607 ANO10Q9NW15 660 aa18.39■□□□□ 0.53
MAP1LC3B-201ENST00000268607 RREB1Q92766 1687 aa18.38■□□□□ 0.53
MAP1LC3B-201ENST00000268607 RIC1Q4ADV7 1423 aa18.38■□□□□ 0.53
MAP1LC3B-201ENST00000268607 FOXP2O15409 715 aa18.38■□□□□ 0.53
MAP1LC3B-201ENST00000268607 PDE8BO95263 885 aa18.38■□□□□ 0.53
MAP1LC3B-201ENST00000268607 PHKA1P46020 1223 aa18.38■□□□□ 0.53
MAP1LC3B-201ENST00000268607 SLC27A3Q5K4L6 730 aa18.38■□□□□ 0.53
MAP1LC3B-201ENST00000268607 ARMCX5Q6P1M9 558 aa18.38■□□□□ 0.53
MAP1LC3B-201ENST00000268607 ZSCAN26Q16670 478 aa18.37■□□□□ 0.53
MAP1LC3B-201ENST00000268607 RAB11FIP4Q86YS3 637 aa18.37■□□□□ 0.53
MAP1LC3B-201ENST00000268607 CEP57L1Q8IYX8 460 aa18.37■□□□□ 0.53
MAP1LC3B-201ENST00000268607 VGLL2Q8N8G2 317 aa18.37■□□□□ 0.53
MAP1LC3B-201ENST00000268607 OSBPL5Q9H0X9 879 aaPredicted RBP18.37■□□□□ 0.53
MAP1LC3B-201ENST00000268607 YY1AP1Q9H869 796 aa18.37■□□□□ 0.53
MAP1LC3B-201ENST00000268607 MYH3P11055 1940 aa18.37■□□□□ 0.53
MAP1LC3B-201ENST00000268607 KINO60870 393 aaKnown RBP18.37■□□□□ 0.53
MAP1LC3B-201ENST00000268607 IDH1O75874 414 aaKnown RBP18.37■□□□□ 0.53
MAP1LC3B-201ENST00000268607 FGAP02671 866 aa18.37■□□□□ 0.53
MAP1LC3B-201ENST00000268607 ADD1P35611 737 aaKnown RBP18.37■□□□□ 0.53
MAP1LC3B-201ENST00000268607 GTF2A1P52655 376 aaPredicted RBP18.37■□□□□ 0.53
MAP1LC3B-201ENST00000268607 CHRNDQ07001 517 aa18.37■□□□□ 0.53
MAP1LC3B-201ENST00000268607 DDR1Q08345 913 aa18.37■□□□□ 0.53
MAP1LC3B-201ENST00000268607 TMCO3Q6UWJ1 677 aa18.37■□□□□ 0.53
MAP1LC3B-201ENST00000268607 CCDC73Q6ZRK6 1079 aa18.37■□□□□ 0.53
MAP1LC3B-201ENST00000268607 TMC6Q7Z403 805 aa18.37■□□□□ 0.53
MAP1LC3B-201ENST00000268607 NLRP3Q96P20 1036 aa18.37■□□□□ 0.53
MAP1LC3B-201ENST00000268607 GEMIN8Q9NWZ8 242 aaKnown RBP18.37■□□□□ 0.53
MAP1LC3B-201ENST00000268607 LOC102724159A0A0B4J2E5 919 aa18.36■□□□□ 0.53
MAP1LC3B-201ENST00000268607 ZRANB2O95218 330 aaKnown RBP eCLIP18.36■□□□□ 0.53
MAP1LC3B-201ENST00000268607 IGHMBP2P38935 993 aaKnown RBP18.36■□□□□ 0.53
MAP1LC3B-201ENST00000268607 BCAMP50895 628 aa18.36■□□□□ 0.53
MAP1LC3B-201ENST00000268607 PWP2Q15269 919 aaKnown RBP18.36■□□□□ 0.53
MAP1LC3B-201ENST00000268607 HOMER1Q86YM7 354 aa18.36■□□□□ 0.53
MAP1LC3B-201ENST00000268607 CNBD1Q8NA66 436 aa18.36■□□□□ 0.53
MAP1LC3B-201ENST00000268607 ZSCAN16Q9H4T2 348 aaPredicted RBP18.36■□□□□ 0.53
MAP1LC3B-201ENST00000268607 FBXO3Q9UK99 471 aa18.36■□□□□ 0.53
MAP1LC3B-201ENST00000268607 JAG2Q9Y219 1238 aa18.36■□□□□ 0.53
MAP1LC3B-201ENST00000268607 SEC31AO94979 1220 aaKnown RBP18.36■□□□□ 0.53
MAP1LC3B-201ENST00000268607 SMC2O95347 1197 aa18.36■□□□□ 0.53
MAP1LC3B-201ENST00000268607 KLRK1P26718 216 aa18.36■□□□□ 0.53
MAP1LC3B-201ENST00000268607 TPM4P67936 248 aa18.36■□□□□ 0.53
MAP1LC3B-201ENST00000268607 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.36■□□□□ 0.53
MAP1LC3B-201ENST00000268607 GPR101Q96P66 508 aaPredicted RBP18.36■□□□□ 0.53
MAP1LC3B-201ENST00000268607 SERPINB2P05120 415 aa18.36■□□□□ 0.53
MAP1LC3B-201ENST00000268607 CASQ1P31415 396 aa18.36■□□□□ 0.53
MAP1LC3B-201ENST00000268607 EXOSC10Q01780 885 aaKnown RBP18.36■□□□□ 0.53
MAP1LC3B-201ENST00000268607 PRR5LQ6MZQ0 368 aa18.36■□□□□ 0.53
MAP1LC3B-201ENST00000268607 UBXN4Q92575 508 aa18.36■□□□□ 0.53
MAP1LC3B-201ENST00000268607 XPO4Q9C0E2 1151 aaKnown RBP18.36■□□□□ 0.53
MAP1LC3B-201ENST00000268607 DDX60Q8IY21 1712 aaKnown RBP18.35■□□□□ 0.53
MAP1LC3B-201ENST00000268607 CARMIL3Q8ND23 1372 aa18.35■□□□□ 0.53
MAP1LC3B-201ENST00000268607 SLC9C2Q5TAH2 1124 aa18.35■□□□□ 0.53
MAP1LC3B-201ENST00000268607 IMPACTQ9P2X3 320 aa18.35■□□□□ 0.53
MAP1LC3B-201ENST00000268607 ORC3Q9UBD5 711 aaPredicted RBP18.35■□□□□ 0.53
MAP1LC3B-201ENST00000268607 DNAI1Q9UI46 699 aa18.35■□□□□ 0.53
MAP1LC3B-201ENST00000268607 GPAA1O43292 621 aa18.35■□□□□ 0.53
MAP1LC3B-201ENST00000268607 SFPQP23246 707 aaKnown RBP eCLIP18.35■□□□□ 0.53
MAP1LC3B-201ENST00000268607 USP28Q96RU2 1077 aa18.35■□□□□ 0.53
MAP1LC3B-201ENST00000268607 PIH1D3Q9NQM4 214 aaKnown RBP18.35■□□□□ 0.53
MAP1LC3B-201ENST00000268607 IFNKQ9P0W0 207 aa18.35■□□□□ 0.53
MAP1LC3B-201ENST00000268607 RCOR1Q9UKL0 485 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms