RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 IRS4O14654 1257 aaPredicted RBP25.53■■□□□ 1.68
CDR2-201ENST00000268383 PRKAB2O43741 272 aa25.53■■□□□ 1.68
CDR2-201ENST00000268383 MYL5Q02045 173 aa25.53■■□□□ 1.68
CDR2-201ENST00000268383 VGLL2Q8N8G2 317 aa25.53■■□□□ 1.68
CDR2-201ENST00000268383 CTSWP56202 376 aa25.52■■□□□ 1.68
CDR2-201ENST00000268383 RESP18Q5W5W9 173 aa25.52■■□□□ 1.68
CDR2-201ENST00000268383 ZNF771Q7L3S4 317 aaPredicted RBP25.52■■□□□ 1.68
CDR2-201ENST00000268383 PLA2G12BQ9BX93 195 aa25.52■■□□□ 1.68
CDR2-201ENST00000268383 ARMT1Q9H993 441 aa25.52■■□□□ 1.68
CDR2-201ENST00000268383 TRMT112Q9UI30 125 aaKnown RBP25.52■■□□□ 1.68
CDR2-201ENST00000268383 KCNH3Q9ULD8 1083 aa25.52■■□□□ 1.68
CDR2-201ENST00000268383 IKBKBO14920 756 aa25.52■■□□□ 1.68
CDR2-201ENST00000268383 TRIM28Q13263 835 aaKnown RBP25.52■■□□□ 1.68
CDR2-201ENST00000268383 STRBPQ96SI9 672 aaKnown RBP25.52■■□□□ 1.68
CDR2-201ENST00000268383 FBXO3Q9UK99 471 aa25.52■■□□□ 1.68
CDR2-201ENST00000268383 IFIT3O14879 490 aaKnown RBP25.51■■□□□ 1.67
CDR2-201ENST00000268383 GIGYF2Q6Y7W6 1299 aaKnown RBP25.51■■□□□ 1.67
CDR2-201ENST00000268383 INTS13Q9NVM9 706 aa25.51■■□□□ 1.67
CDR2-201ENST00000268383 TCRBV5S4A2TA0A5A2 114 aa25.51■■□□□ 1.67
CDR2-201ENST00000268383 PSDA5PKW4 1024 aaPredicted RBP25.51■■□□□ 1.67
CDR2-201ENST00000268383 PPP6R2O75170 966 aa25.51■■□□□ 1.67
CDR2-201ENST00000268383 BRINP3Q76B58 766 aa25.51■■□□□ 1.67
CDR2-201ENST00000268383 MAGEB6Q8N7X4 407 aa25.51■■□□□ 1.67
CDR2-201ENST00000268383 PDILTQ8N807 584 aa25.51■■□□□ 1.67
CDR2-201ENST00000268383 TBC1D2BQ9UPU7 963 aa25.51■■□□□ 1.67
CDR2-201ENST00000268383 MAP3K15Q6ZN16 1313 aa25.51■■□□□ 1.67
CDR2-201ENST00000268383 MBD4O95243 580 aa25.5■■□□□ 1.67
CDR2-201ENST00000268383 PDE8BO95263 885 aa25.5■■□□□ 1.67
CDR2-201ENST00000268383 PRR29P0C7W0 189 aa25.5■■□□□ 1.67
CDR2-201ENST00000268383 TRIM29Q14134 588 aa25.5■■□□□ 1.67
CDR2-201ENST00000268383 TRMT44Q8IYL2 757 aaKnown RBP25.5■■□□□ 1.67
CDR2-201ENST00000268383 L2HGDHQ9H9P8 463 aa25.5■■□□□ 1.67
CDR2-201ENST00000268383 TNS2Q63HR2 1409 aa25.5■■□□□ 1.67
CDR2-201ENST00000268383 ECM29Q5VYK3 1845 aa25.5■■□□□ 1.67
CDR2-201ENST00000268383 CDKL5O76039 1030 aa25.5■■□□□ 1.67
CDR2-201ENST00000268383 EVA1CP58658 441 aa25.5■■□□□ 1.67
CDR2-201ENST00000268383 CPLX2Q6PUV4 134 aaKnown RBP25.5■■□□□ 1.67
CDR2-201ENST00000268383 KRBA2Q6ZNG9 492 aa25.5■■□□□ 1.67
CDR2-201ENST00000268383 TIGD1Q96MW7 591 aa25.5■■□□□ 1.67
CDR2-201ENST00000268383 WDR19Q8NEZ3 1342 aa25.5■■□□□ 1.67
CDR2-201ENST00000268383 COL5A2P05997 1499 aaPredicted RBP25.5■■□□□ 1.67
CDR2-201ENST00000268383 TOB1P50616 345 aaPredicted RBP25.5■■□□□ 1.67
CDR2-201ENST00000268383 CCDC93Q567U6 631 aa25.5■■□□□ 1.67
CDR2-201ENST00000268383 SLC12A7Q9Y666 1083 aa25.5■■□□□ 1.67
CDR2-201ENST00000268383 NR5A1Q13285 461 aa25.49■■□□□ 1.67
CDR2-201ENST00000268383 JMYQ8N9B5 988 aa25.49■■□□□ 1.67
CDR2-201ENST00000268383 SMIM22K7EJ46 135 aa25.49■■□□□ 1.67
CDR2-201ENST00000268383 UBE3CQ15386 1083 aa25.49■■□□□ 1.67
CDR2-201ENST00000268383 IFNL3Q8IZI9 196 aa25.49■■□□□ 1.67
CDR2-201ENST00000268383 EPC1Q9H2F5 836 aa25.49■■□□□ 1.67
CDR2-201ENST00000268383 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.49■■□□□ 1.672e-7■■■□□ 17.7
CDR2-201ENST00000268383 KIF2AO00139 706 aaPredicted RBP25.48■■□□□ 1.67
CDR2-201ENST00000268383 SLC4A9Q96Q91 983 aa25.48■■□□□ 1.67
CDR2-201ENST00000268383 NAPBQ9H115 298 aa25.48■■□□□ 1.67
CDR2-201ENST00000268383 TOP1P11387 765 aaKnown RBP25.48■■□□□ 1.67
CDR2-201ENST00000268383 FMR1Q06787 632 aaKnown RBP eCLIP25.48■■□□□ 1.675e-8■□□□□ 10.1
CDR2-201ENST00000268383 TRIM65Q6PJ69 517 aa25.48■■□□□ 1.67
CDR2-201ENST00000268383 OLFM4Q6UX06 510 aa25.48■■□□□ 1.67
CDR2-201ENST00000268383 ZBTB1Q9Y2K1 713 aa25.48■■□□□ 1.67
CDR2-201ENST00000268383 ETF1P62495 437 aaKnown RBP25.47■■□□□ 1.67
CDR2-201ENST00000268383 SSRP1Q08945 709 aaKnown RBP25.47■■□□□ 1.67
CDR2-201ENST00000268383 USP49Q70CQ1 688 aa25.47■■□□□ 1.67
CDR2-201ENST00000268383 VSTM4Q8IW00 320 aa25.47■■□□□ 1.67
CDR2-201ENST00000268383 KRT222Q8N1A0 295 aa25.47■■□□□ 1.67
CDR2-201ENST00000268383 SLFN14P0C7P3 912 aa25.47■■□□□ 1.67
CDR2-201ENST00000268383 TTF1Q15361 905 aaPredicted RBP25.47■■□□□ 1.67
CDR2-201ENST00000268383 ARHGAP29Q52LW3 1261 aa25.47■■□□□ 1.67
CDR2-201ENST00000268383 CARD10Q9BWT7 1032 aa25.47■■□□□ 1.67
CDR2-201ENST00000268383 SEC31BQ9NQW1 1179 aa25.47■■□□□ 1.67
CDR2-201ENST00000268383 PAPPAQ13219 1627 aa25.46■■□□□ 1.67
CDR2-201ENST00000268383 POLR2DO15514 142 aaKnown RBP25.46■■□□□ 1.67
CDR2-201ENST00000268383 DIS3L2Q8IYB7 885 aaKnown RBP25.46■■□□□ 1.67
CDR2-201ENST00000268383 TMEM87BQ96K49 555 aa25.46■■□□□ 1.67
CDR2-201ENST00000268383 NRDCO43847 1150 aa25.46■■□□□ 1.67
CDR2-201ENST00000268383 CUTAO60888 179 aa25.46■■□□□ 1.67
CDR2-201ENST00000268383 URI1O94763 535 aaPredicted RBP25.46■■□□□ 1.67
CDR2-201ENST00000268383 ADKP55263 362 aaKnown RBP25.46■■□□□ 1.67
CDR2-201ENST00000268383 RASGRF1Q13972 1273 aa25.46■■□□□ 1.67
CDR2-201ENST00000268383 NOSTRINQ8IVI9 506 aa25.46■■□□□ 1.67
CDR2-201ENST00000268383 REXO1L1PQ8IX06 675 aa25.46■■□□□ 1.67
CDR2-201ENST00000268383 MIGA1Q8NAN2 632 aa25.46■■□□□ 1.67
CDR2-201ENST00000268383 OXER1Q8TDS5 423 aa25.46■■□□□ 1.67
CDR2-201ENST00000268383 SERTAD1Q9UHV2 236 aa25.46■■□□□ 1.67
CDR2-201ENST00000268383 PCDHB6Q9Y5E3 794 aa25.46■■□□□ 1.67
CDR2-201ENST00000268383 STARD3NLO95772 234 aa25.45■■□□□ 1.67
CDR2-201ENST00000268383 TOGARAM1Q9Y4F4 1720 aa25.45■■□□□ 1.67
CDR2-201ENST00000268383 CLCN6P51797 869 aa25.45■■□□□ 1.66
CDR2-201ENST00000268383 HSPA2P54652 639 aa25.45■■□□□ 1.66
CDR2-201ENST00000268383 KRI1Q8N9T8 703 aaKnown RBP25.45■■□□□ 1.66
CDR2-201ENST00000268383 MAN1B1Q9UKM7 699 aa25.45■■□□□ 1.66
CDR2-201ENST00000268383 ABCC12Q96J65 1359 aa25.45■■□□□ 1.66
CDR2-201ENST00000268383 SPATA5Q8NB90 893 aa25.44■■□□□ 1.66
CDR2-201ENST00000268383 NUP133Q8WUM0 1156 aa25.44■■□□□ 1.66
CDR2-201ENST00000268383 IQSEC3Q9UPP2 1182 aaPredicted RBP25.44■■□□□ 1.66
CDR2-201ENST00000268383 SHANK3Q9BYB0 1731 aa25.44■■□□□ 1.66
CDR2-201ENST00000268383 hCG_1642624A0A1W2PR95 340 aa25.44■■□□□ 1.66
CDR2-201ENST00000268383 MDM2Q00987 491 aaPredicted RBP25.44■■□□□ 1.66
CDR2-201ENST00000268383 SGMS1Q86VZ5 419 aa25.44■■□□□ 1.66
CDR2-201ENST00000268383 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.44■■□□□ 1.66
CDR2-201ENST00000268383 PATL2C9JE40 543 aaKnown RBP25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms