RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 DRC1Q96MC2 740 aa18.48■□□□□ 0.55
PDZRN3-201ENST00000263666 WDR17Q8IZU2 1322 aa18.48■□□□□ 0.55
PDZRN3-201ENST00000263666 MED23Q9ULK4 1368 aa18.48■□□□□ 0.55
PDZRN3-201ENST00000263666 TXLNAP40222 546 aa18.48■□□□□ 0.55
PDZRN3-201ENST00000263666 ZNF569Q5MCW4 686 aa18.48■□□□□ 0.55
PDZRN3-201ENST00000263666 FKBP15Q5T1M5 1219 aa18.48■□□□□ 0.55
PDZRN3-201ENST00000263666 IQCA1Q86XH1 822 aa18.48■□□□□ 0.55
PDZRN3-201ENST00000263666 DHX40Q8IX18 779 aaKnown RBP18.48■□□□□ 0.55
PDZRN3-201ENST00000263666 CCDC196A0A1B0GTZ2 297 aa18.48■□□□□ 0.55
PDZRN3-201ENST00000263666 CTCFLQ8NI51 663 aaPredicted RBP18.48■□□□□ 0.55
PDZRN3-201ENST00000263666 GNL3LQ9NVN8 582 aaKnown RBP18.48■□□□□ 0.55
PDZRN3-201ENST00000263666 JAKMIP3Q5VZ66 844 aa18.47■□□□□ 0.55
PDZRN3-201ENST00000263666 APOA5Q6Q788 366 aa18.47■□□□□ 0.55
PDZRN3-201ENST00000263666 CARD10Q9BWT7 1032 aa18.47■□□□□ 0.55
PDZRN3-201ENST00000263666 NIP7Q9Y221 180 aaKnown RBP eCLIP18.47■□□□□ 0.55
PDZRN3-201ENST00000263666 BCAMP50895 628 aa18.47■□□□□ 0.55
PDZRN3-201ENST00000263666 PPARDQ03181 441 aa18.47■□□□□ 0.55
PDZRN3-201ENST00000263666 CATIPQ7Z7H3 387 aa18.47■□□□□ 0.55
PDZRN3-201ENST00000263666 DPF2Q92785 391 aa18.47■□□□□ 0.55
PDZRN3-201ENST00000263666 ZHX3Q9H4I2 956 aa18.47■□□□□ 0.55
PDZRN3-201ENST00000263666 TRIM75PA6NK02 468 aa18.47■□□□□ 0.55
PDZRN3-201ENST00000263666 RFC4P35249 363 aa18.47■□□□□ 0.55
PDZRN3-201ENST00000263666 DMTNQ08495 405 aa18.47■□□□□ 0.55
PDZRN3-201ENST00000263666 AXDND1Q5T1B0 1012 aaPredicted RBP18.47■□□□□ 0.55
PDZRN3-201ENST00000263666 FMR1NBQ8N0W7 255 aaPredicted RBP18.47■□□□□ 0.55
PDZRN3-201ENST00000263666 UIMC1Q96RL1 719 aa18.47■□□□□ 0.55
PDZRN3-201ENST00000263666 MAGEC2Q9UBF1 373 aaPredicted RBP18.47■□□□□ 0.55
PDZRN3-201ENST00000263666 CEP131Q9UPN4 1083 aa18.47■□□□□ 0.55
PDZRN3-201ENST00000263666 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.47■□□□□ 0.55
PDZRN3-201ENST00000263666 PXDNQ92626 1479 aa18.47■□□□□ 0.55
PDZRN3-201ENST00000263666 MATR3P43243 847 aaKnown RBP eCLIP18.47■□□□□ 0.55
PDZRN3-201ENST00000263666 IFIT1BQ5T764 474 aaKnown RBP18.47■□□□□ 0.55
PDZRN3-201ENST00000263666 C1orf167Q5SNV9 1468 aa18.46■□□□□ 0.55
PDZRN3-201ENST00000263666 FDPSP14324 419 aaKnown RBP18.46■□□□□ 0.55
PDZRN3-201ENST00000263666 MCAMP43121 646 aa18.46■□□□□ 0.55
PDZRN3-201ENST00000263666 HLFQ16534 295 aa18.46■□□□□ 0.55
PDZRN3-201ENST00000263666 KIAA1328Q86T90 577 aa18.46■□□□□ 0.55
PDZRN3-201ENST00000263666 TBC1D10CQ8IV04 446 aa18.46■□□□□ 0.55
PDZRN3-201ENST00000263666 GDAP1L1Q96MZ0 367 aa18.46■□□□□ 0.55
PDZRN3-201ENST00000263666 RFX5P48382 616 aaPredicted RBP18.46■□□□□ 0.55
PDZRN3-201ENST00000263666 FOXO4P98177 505 aa18.46■□□□□ 0.55
PDZRN3-201ENST00000263666 PIH1D3Q9NQM4 214 aaKnown RBP18.46■□□□□ 0.55
PDZRN3-201ENST00000263666 SH3TC1Q8TE82 1336 aa18.46■□□□□ 0.55
PDZRN3-201ENST00000263666 WDHD1O75717 1129 aaPredicted RBP18.46■□□□□ 0.55
PDZRN3-201ENST00000263666 KMT5BQ4FZB7 885 aa18.46■□□□□ 0.55
PDZRN3-201ENST00000263666 ATL3Q6DD88 541 aa18.46■□□□□ 0.55
PDZRN3-201ENST00000263666 CYB5R4Q7L1T6 521 aa18.46■□□□□ 0.55
PDZRN3-201ENST00000263666 CAPZA3Q96KX2 299 aa18.46■□□□□ 0.55
PDZRN3-201ENST00000263666 CDCA7Q9BWT1 371 aaPredicted RBP18.46■□□□□ 0.55
PDZRN3-201ENST00000263666 ITSN1Q15811 1721 aa18.46■□□□□ 0.54
PDZRN3-201ENST00000263666 TSPY2A6NKD2 308 aa18.45■□□□□ 0.54
PDZRN3-201ENST00000263666 CMA1P23946 247 aa18.45■□□□□ 0.54
PDZRN3-201ENST00000263666 CDC25AP30304 524 aa18.45■□□□□ 0.54
PDZRN3-201ENST00000263666 SMARCC2Q8TAQ2 1214 aa18.45■□□□□ 0.54
PDZRN3-201ENST00000263666 STX8Q9UNK0 236 aa18.45■□□□□ 0.54
PDZRN3-201ENST00000263666 CYP2D7A0A087X1C5 515 aa18.45■□□□□ 0.54
PDZRN3-201ENST00000263666 H7C1W4 665 aa18.45■□□□□ 0.54
PDZRN3-201ENST00000263666 TANGO6Q9C0B7 1094 aa18.45■□□□□ 0.54
PDZRN3-201ENST00000263666 SEC31BQ9NQW1 1179 aa18.45■□□□□ 0.54
PDZRN3-201ENST00000263666 ETF1P62495 437 aaKnown RBP18.45■□□□□ 0.54
PDZRN3-201ENST00000263666 POSTNQ15063 836 aa18.45■□□□□ 0.54
PDZRN3-201ENST00000263666 ARFGAP3Q9NP61 516 aa18.45■□□□□ 0.54
PDZRN3-201ENST00000263666 CLSTN1O94985 981 aa18.44■□□□□ 0.54
PDZRN3-201ENST00000263666 UQCRFS1P1P0C7P4 283 aa18.44■□□□□ 0.54
PDZRN3-201ENST00000263666 CDC27P30260 824 aa18.44■□□□□ 0.54
PDZRN3-201ENST00000263666 KCNQ4P56696 695 aa18.44■□□□□ 0.54
PDZRN3-201ENST00000263666 FAM182BQ5T319 152 aa18.44■□□□□ 0.54
PDZRN3-201ENST00000263666 AMOTL1Q8IY63 956 aa18.44■□□□□ 0.54
PDZRN3-201ENST00000263666 IGSF22Q8N9C0 903 aa18.44■□□□□ 0.54
PDZRN3-201ENST00000263666 GUCA1BQ9UMX6 200 aa18.44■□□□□ 0.54
PDZRN3-201ENST00000263666 USP5P45974 858 aa18.44■□□□□ 0.54
PDZRN3-201ENST00000263666 NOC3LQ8WTT2 800 aaKnown RBP18.44■□□□□ 0.54
PDZRN3-201ENST00000263666 ERVV-2B6SEH9 535 aa18.44■□□□□ 0.54
PDZRN3-201ENST00000263666 SAMSN1Q9NSI8 373 aaKnown RBP18.44■□□□□ 0.54
PDZRN3-201ENST00000263666 TECPR2O15040 1411 aa18.44■□□□□ 0.54
PDZRN3-201ENST00000263666 PPP2R3AQ06190 1150 aa18.44■□□□□ 0.54
PDZRN3-201ENST00000263666 SLC39A14Q15043 492 aa18.44■□□□□ 0.54
PDZRN3-201ENST00000263666 ARMCX5Q6P1M9 558 aa18.44■□□□□ 0.54
PDZRN3-201ENST00000263666 NBPF5PQ86XG9 351 aaPredicted RBP18.44■□□□□ 0.54
PDZRN3-201ENST00000263666 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.44■□□□□ 0.54
PDZRN3-201ENST00000263666 IFNL3Q8IZI9 196 aa18.43■□□□□ 0.54
PDZRN3-201ENST00000263666 KRT23Q9C075 422 aa18.43■□□□□ 0.54
PDZRN3-201ENST00000263666 ZSWIM5Q9P217 1185 aa18.43■□□□□ 0.54
PDZRN3-201ENST00000263666 CTNND2Q9UQB3 1225 aa18.43■□□□□ 0.54
PDZRN3-201ENST00000263666 ZBTB1Q9Y2K1 713 aa18.43■□□□□ 0.54
PDZRN3-201ENST00000263666 FAM170AA1A519 330 aa18.43■□□□□ 0.54
PDZRN3-201ENST00000263666 SPATA5Q8NB90 893 aa18.43■□□□□ 0.54
PDZRN3-201ENST00000263666 NEK11Q8NG66 645 aa18.43■□□□□ 0.54
PDZRN3-201ENST00000263666 FAM47AQ5JRC9 791 aa18.43■□□□□ 0.54
PDZRN3-201ENST00000263666 DEF6Q9H4E7 631 aa18.43■□□□□ 0.54
PDZRN3-201ENST00000263666 RNF41Q9H4P4 317 aaPredicted RBP18.43■□□□□ 0.54
PDZRN3-201ENST00000263666 MKNK2Q9HBH9 465 aa18.43■□□□□ 0.54
PDZRN3-201ENST00000263666 KDM4FA0A1W2PPD8 638 aa18.42■□□□□ 0.54
PDZRN3-201ENST00000263666 GYS2P54840 703 aa18.42■□□□□ 0.54
PDZRN3-201ENST00000263666 ESR2Q92731 530 aa18.42■□□□□ 0.54
PDZRN3-201ENST00000263666 CCDC47Q96A33 483 aaKnown RBP18.42■□□□□ 0.54
PDZRN3-201ENST00000263666 BAZ2BQ9UIF8 2168 aaKnown RBP18.42■□□□□ 0.54
PDZRN3-201ENST00000263666 EXOSC10Q01780 885 aaKnown RBP18.42■□□□□ 0.54
PDZRN3-201ENST00000263666 CAVIN4Q5BKX8 364 aa18.42■□□□□ 0.54
PDZRN3-201ENST00000263666 USPL1Q5W0Q7 1092 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms