RNA–Protein interactions for RNA: ENST00000254644.12

MRPL35-201, Transcript of mitochondrial ribosomal protein L35, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene MRPL35, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL35-201ENST00000254644 CXCL11O14625 94 aa16.13■□□□□ 0.17
MRPL35-201ENST00000254644 NPM3O75607 178 aaKnown RBP16.13■□□□□ 0.17
MRPL35-201ENST00000254644 GNRH1P01148 92 aa16.13■□□□□ 0.17
MRPL35-201ENST00000254644 GNAI2P04899 355 aa16.13■□□□□ 0.17
MRPL35-201ENST00000254644 MVPQ14764 893 aaKnown RBP16.13■□□□□ 0.17
MRPL35-201ENST00000254644 SPTY2D1Q68D10 685 aaPredicted RBP16.13■□□□□ 0.17
MRPL35-201ENST00000254644 SLF2Q8IX21 1173 aa16.13■□□□□ 0.17
MRPL35-201ENST00000254644 ARHGAP39Q9C0H5 1083 aa16.13■□□□□ 0.17
MRPL35-201ENST00000254644 DDX4Q9NQI0 724 aaKnown RBP16.13■□□□□ 0.17
MRPL35-201ENST00000254644 HMG20BQ9P0W2 317 aa16.13■□□□□ 0.17
MRPL35-201ENST00000254644 ABCF2Q9UG63 623 aa16.13■□□□□ 0.17
MRPL35-201ENST00000254644 MROH7-TTC4A0A0A0MT08 1334 aa16.13■□□□□ 0.17
MRPL35-201ENST00000254644 FOCADQ5VW36 1801 aa16.12■□□□□ 0.17
MRPL35-201ENST00000254644 DDTLA6NHG4 134 aaPredicted RBP16.12■□□□□ 0.17
MRPL35-201ENST00000254644 CTGFP29279 349 aa16.12■□□□□ 0.17
MRPL35-201ENST00000254644 ARID4AP29374 1257 aaPredicted RBP16.12■□□□□ 0.17
MRPL35-201ENST00000254644 RHBDL3P58872 404 aa16.12■□□□□ 0.17
MRPL35-201ENST00000254644 GPAT2Q6NUI2 795 aa16.12■□□□□ 0.17
MRPL35-201ENST00000254644 PDHXO00330 501 aa16.11■□□□□ 0.17
MRPL35-201ENST00000254644 EN2P19622 333 aaPredicted RBP16.11■□□□□ 0.17
MRPL35-201ENST00000254644 BTDP43251 543 aa16.11■□□□□ 0.17
MRPL35-201ENST00000254644 PRMT2P55345 433 aa16.11■□□□□ 0.17
MRPL35-201ENST00000254644 MECOMQ03112 1051 aa16.11■□□□□ 0.17
MRPL35-201ENST00000254644 ERICH6Q7L0X2 663 aa16.11■□□□□ 0.17
MRPL35-201ENST00000254644 DZIP1Q86YF9 867 aaKnown RBP16.11■□□□□ 0.17
MRPL35-201ENST00000254644 SCYL3Q8IZE3 742 aa16.11■□□□□ 0.17
MRPL35-201ENST00000254644 AFG3L2Q9Y4W6 797 aa16.11■□□□□ 0.17
MRPL35-201ENST00000254644 CEP290O15078 2479 aa16.1■□□□□ 0.17
MRPL35-201ENST00000254644 SIPA1L1O43166 1804 aa16.1■□□□□ 0.17
MRPL35-201ENST00000254644 TBC1D12O60347 775 aa16.1■□□□□ 0.17
MRPL35-201ENST00000254644 MAP4K4O95819 1239 aaPredicted RBP16.1■□□□□ 0.17
MRPL35-201ENST00000254644 PTPRAP18433 802 aa16.1■□□□□ 0.17
MRPL35-201ENST00000254644 POLA2Q14181 598 aa16.1■□□□□ 0.17
MRPL35-201ENST00000254644 KIF22Q14807 665 aa16.1■□□□□ 0.17
MRPL35-201ENST00000254644 SLC9C1Q4G0N8 1177 aa16.1■□□□□ 0.17
MRPL35-201ENST00000254644 PI16Q6UXB8 463 aa16.1■□□□□ 0.17
MRPL35-201ENST00000254644 NBPF11Q86T75 865 aa16.1■□□□□ 0.17
MRPL35-201ENST00000254644 TMEM57Q8N5G2 664 aa16.1■□□□□ 0.17
MRPL35-201ENST00000254644 SPATA5Q8NB90 893 aa16.1■□□□□ 0.17
MRPL35-201ENST00000254644 CLUAP1Q96AJ1 413 aa16.1■□□□□ 0.17
MRPL35-201ENST00000254644 NSUN4Q96CB9 384 aaKnown RBP16.1■□□□□ 0.17
MRPL35-201ENST00000254644 NEUROD6Q96NK8 337 aa16.1■□□□□ 0.17
MRPL35-201ENST00000254644 COL2A1P02458 1487 aaPredicted RBP16.1■□□□□ 0.17
MRPL35-201ENST00000254644 MAST2Q6P0Q8 1798 aa16.09■□□□□ 0.17
MRPL35-201ENST00000254644 A0A0G2JLL6 359 aaPredicted RBP16.09■□□□□ 0.17
MRPL35-201ENST00000254644 CTNND1O60716 968 aaKnown RBP16.09■□□□□ 0.17
MRPL35-201ENST00000254644 SLURP2P0DP57 97 aa16.09■□□□□ 0.17
MRPL35-201ENST00000254644 BCRP11274 1271 aa16.09■□□□□ 0.17
MRPL35-201ENST00000254644 MCAMP43121 646 aa16.09■□□□□ 0.17
MRPL35-201ENST00000254644 PRRT2Q7Z6L0 340 aaPredicted RBP16.09■□□□□ 0.17
MRPL35-201ENST00000254644 FRAT1Q92837 279 aaPredicted RBP16.09■□□□□ 0.17
MRPL35-201ENST00000254644 GPR108Q9NPR9 543 aa16.09■□□□□ 0.17
MRPL35-201ENST00000254644 CPA4Q9UI42 421 aa16.09■□□□□ 0.17
MRPL35-201ENST00000254644 G3BP1Q13283 466 aaKnown RBP eCLIP16.08■□□□□ 0.16
MRPL35-201ENST00000254644 ZKSCAN2Q63HK3 967 aa16.08■□□□□ 0.16
MRPL35-201ENST00000254644 TBC1D9Q6ZT07 1266 aa16.08■□□□□ 0.16
MRPL35-201ENST00000254644 SSH3Q8TE77 659 aa16.08■□□□□ 0.16
MRPL35-201ENST00000254644 TRIM47Q96LD4 638 aa16.08■□□□□ 0.16
MRPL35-201ENST00000254644 SRRDQ9UH36 339 aa16.08■□□□□ 0.16
MRPL35-201ENST00000254644 ZHX2Q9Y6X8 837 aa16.08■□□□□ 0.16
MRPL35-201ENST00000254644 LOC285556D6RIA3 1793 aa16.08■□□□□ 0.16
MRPL35-201ENST00000254644 LDHCP07864 332 aa16.07■□□□□ 0.16
MRPL35-201ENST00000254644 PSMC4P43686 418 aa16.07■□□□□ 0.16
MRPL35-201ENST00000254644 ATP8B2P98198 1209 aa16.07■□□□□ 0.16
MRPL35-201ENST00000254644 FASTKD5Q7L8L6 764 aaKnown RBP16.07■□□□□ 0.16
MRPL35-201ENST00000254644 TMEM106CQ9BVX2 250 aa16.07■□□□□ 0.16
MRPL35-201ENST00000254644 SLC45A1Q9Y2W3 748 aa16.07■□□□□ 0.16
MRPL35-201ENST00000254644 UQCRFS1P1P0C7P4 283 aa16.06■□□□□ 0.16
MRPL35-201ENST00000254644 OSBPP22059 807 aa16.06■□□□□ 0.16
MRPL35-201ENST00000254644 GSTO1P78417 241 aa16.06■□□□□ 0.16
MRPL35-201ENST00000254644 PICALMQ13492 652 aa16.06■□□□□ 0.16
MRPL35-201ENST00000254644 ZSCAN29Q8IWY8 852 aaPredicted RBP16.06■□□□□ 0.16
MRPL35-201ENST00000254644 SH3TC2Q8TF17 1288 aa16.06■□□□□ 0.16
MRPL35-201ENST00000254644 PARK7Q99497 189 aaKnown RBP16.06■□□□□ 0.16
MRPL35-201ENST00000254644 PICK1Q9NRD5 415 aa16.06■□□□□ 0.16
MRPL35-201ENST00000254644 ZBTB7BO15156 539 aaPredicted RBP16.05■□□□□ 0.16
MRPL35-201ENST00000254644 CYP2C8P10632 490 aa16.05■□□□□ 0.16
MRPL35-201ENST00000254644 GORABQ5T7V8 394 aa16.05■□□□□ 0.16
MRPL35-201ENST00000254644 ZNF512BQ96KM6 892 aaPredicted RBP16.05■□□□□ 0.16
MRPL35-201ENST00000254644 OSBPL5Q9H0X9 879 aaPredicted RBP16.05■□□□□ 0.16
MRPL35-201ENST00000254644 NOP58Q9Y2X3 529 aaKnown RBP16.05■□□□□ 0.16
MRPL35-201ENST00000254644 MYH1P12882 1939 aa16.04■□□□□ 0.16
MRPL35-201ENST00000254644 IGSF3O75054 1194 aa16.04■□□□□ 0.16
MRPL35-201ENST00000254644 HOXD10P28358 340 aa16.04■□□□□ 0.16
MRPL35-201ENST00000254644 TNNI3KQ59H18 835 aa16.04■□□□□ 0.16
MRPL35-201ENST00000254644 FPGT-TNNI3KV9GXZ4 949 aa16.04■□□□□ 0.16
MRPL35-201ENST00000254644 RLBP1P12271 317 aa16.03■□□□□ 0.16
MRPL35-201ENST00000254644 PPP4CP60510 307 aa16.03■□□□□ 0.16
MRPL35-201ENST00000254644 DBNDD2Q9BQY9 259 aa16.03■□□□□ 0.16
MRPL35-201ENST00000254644 RAI14Q9P0K7 980 aa16.03■□□□□ 0.16
MRPL35-201ENST00000254644 PCDH10Q9P2E7 1040 aa16.03■□□□□ 0.16
MRPL35-201ENST00000254644 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.03■□□□□ 0.16
MRPL35-201ENST00000254644 FAM196BA6NMK8 535 aa16.02■□□□□ 0.16
MRPL35-201ENST00000254644 FMNL1O95466 1100 aaPredicted RBP16.02■□□□□ 0.16
MRPL35-201ENST00000254644 CYP2E1P05181 493 aaPredicted RBP16.02■□□□□ 0.16
MRPL35-201ENST00000254644 RRP1BQ14684 758 aaKnown RBP16.02■□□□□ 0.16
MRPL35-201ENST00000254644 MTFR1Q15390 333 aa16.02■□□□□ 0.16
MRPL35-201ENST00000254644 SLC4A8Q2Y0W8 1093 aa16.02■□□□□ 0.16
MRPL35-201ENST00000254644 GCC1Q96CN9 775 aa16.02■□□□□ 0.16
MRPL35-201ENST00000254644 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms