RNA–Protein interactions for RNA: ENST00000250113.11

FXR2-201, Transcript of FMR1 autosomal homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXR2, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR2-201ENST00000250113 ZNF804BA4D1E1 1349 aa22.7■■□□□ 1.22
FXR2-201ENST00000250113 SNW1Q13573 536 aaKnown RBP22.7■■□□□ 1.22
FXR2-201ENST00000250113 CCDC73Q6ZRK6 1079 aa22.7■■□□□ 1.22
FXR2-201ENST00000250113 CBX8Q9HC52 389 aa22.7■■□□□ 1.22
FXR2-201ENST00000250113 COL5A3P25940 1745 aaPredicted RBP22.69■■□□□ 1.22
FXR2-201ENST00000250113 KIF23Q02241 960 aaPredicted RBP22.69■■□□□ 1.22
FXR2-201ENST00000250113 FAM200AQ8TCP9 573 aa22.69■■□□□ 1.22
FXR2-201ENST00000250113 NUP133Q8WUM0 1156 aa22.69■■□□□ 1.22
FXR2-201ENST00000250113 RRP9O43818 475 aaKnown RBP22.69■■□□□ 1.22
FXR2-201ENST00000250113 IARSP41252 1262 aaKnown RBP22.69■■□□□ 1.22
FXR2-201ENST00000250113 PPARAQ07869 468 aa22.69■■□□□ 1.22
FXR2-201ENST00000250113 SLC10A5Q5PT55 438 aa22.69■■□□□ 1.22
FXR2-201ENST00000250113 MYSM1Q5VVJ2 828 aa22.69■■□□□ 1.22
FXR2-201ENST00000250113 SYNE3Q6ZMZ3 975 aa22.69■■□□□ 1.22
FXR2-201ENST00000250113 PNPLA7Q6ZV29 1317 aa22.69■■□□□ 1.22
FXR2-201ENST00000250113 GNAT2P19087 354 aa22.68■■□□□ 1.22
FXR2-201ENST00000250113 RFC4P35249 363 aa22.68■■□□□ 1.22
FXR2-201ENST00000250113 GNL2Q13823 731 aaKnown RBP22.68■■□□□ 1.22
FXR2-201ENST00000250113 KRT40Q6A162 431 aa22.68■■□□□ 1.22
FXR2-201ENST00000250113 MARCKSP29966 332 aaPredicted RBP22.68■■□□□ 1.22
FXR2-201ENST00000250113 GUCY1A2P33402 732 aa22.68■■□□□ 1.22
FXR2-201ENST00000250113 NTRK3Q16288 839 aa22.68■■□□□ 1.22
FXR2-201ENST00000250113 LINC00301Q8NCQ3 95 aa22.68■■□□□ 1.22
FXR2-201ENST00000250113 KRT23Q9C075 422 aa22.68■■□□□ 1.22
FXR2-201ENST00000250113 NYXQ9GZU5 481 aa22.68■■□□□ 1.22
FXR2-201ENST00000250113 ARAP2Q8WZ64 1704 aa22.68■■□□□ 1.22
FXR2-201ENST00000250113 FAM196AQ6ZSG2 479 aa22.68■■□□□ 1.22
FXR2-201ENST00000250113 RTEL1Q9NZ71 1219 aa22.68■■□□□ 1.22
FXR2-201ENST00000250113 RC3H1Q5TC82 1133 aaKnown RBP22.67■■□□□ 1.22
FXR2-201ENST00000250113 CNNM2Q9H8M5 875 aa22.67■■□□□ 1.22
FXR2-201ENST00000250113 WTAPQ15007 396 aa22.67■■□□□ 1.22
FXR2-201ENST00000250113 CPLX2Q6PUV4 134 aaKnown RBP22.67■■□□□ 1.22
FXR2-201ENST00000250113 KINO60870 393 aaKnown RBP22.66■■□□□ 1.22
FXR2-201ENST00000250113 SGMS1Q86VZ5 419 aa22.66■■□□□ 1.22
FXR2-201ENST00000250113 STAG1Q8WVM7 1258 aa22.66■■□□□ 1.22
FXR2-201ENST00000250113 RIOK1Q9BRS2 568 aaKnown RBP22.66■■□□□ 1.22
FXR2-201ENST00000250113 PRDX5P30044 214 aa22.66■■□□□ 1.22
FXR2-201ENST00000250113 ZNF165P49910 485 aa22.66■■□□□ 1.22
FXR2-201ENST00000250113 NDUFA8P51970 172 aa22.66■■□□□ 1.22
FXR2-201ENST00000250113 RBM43Q6ZSC3 357 aaKnown RBP22.66■■□□□ 1.22
FXR2-201ENST00000250113 GPR101Q96P66 508 aaPredicted RBP22.66■■□□□ 1.22
FXR2-201ENST00000250113 AATFQ9NY61 560 aaKnown RBP eCLIP22.66■■□□□ 1.22
FXR2-201ENST00000250113 TRIM5Q9C035 493 aa22.65■■□□□ 1.22
FXR2-201ENST00000250113 SPTLC2O15270 562 aa22.65■■□□□ 1.22
FXR2-201ENST00000250113 CDKL5O76039 1030 aa22.65■■□□□ 1.22
FXR2-201ENST00000250113 HIBADHP31937 336 aaKnown RBP22.65■■□□□ 1.22
FXR2-201ENST00000250113 LIFRP42702 1097 aa22.65■■□□□ 1.22
FXR2-201ENST00000250113 CCDC186Q7Z3E2 898 aa22.65■■□□□ 1.22
FXR2-201ENST00000250113 PIBF1Q8WXW3 757 aa22.65■■□□□ 1.22
FXR2-201ENST00000250113 GJD4Q96KN9 370 aaPredicted RBP22.65■■□□□ 1.22
FXR2-201ENST00000250113 MECOMQ03112 1051 aa22.65■■□□□ 1.22
FXR2-201ENST00000250113 FAM160A1Q05DH4 1040 aa22.65■■□□□ 1.22
FXR2-201ENST00000250113 ARID5BQ14865 1188 aa22.65■■□□□ 1.22
FXR2-201ENST00000250113 TRAPPC3LQ5T215 181 aa22.65■■□□□ 1.22
FXR2-201ENST00000250113 FBXO33Q7Z6M2 555 aa22.65■■□□□ 1.22
FXR2-201ENST00000250113 ENGASEQ8NFI3 743 aa22.65■■□□□ 1.22
FXR2-201ENST00000250113 LRRC4BQ9NT99 713 aa22.65■■□□□ 1.22
FXR2-201ENST00000250113 ERICH2A1L162 156 aa22.64■■□□□ 1.22
FXR2-201ENST00000250113 ATL3Q6DD88 541 aa22.64■■□□□ 1.22
FXR2-201ENST00000250113 KCNJ14Q9UNX9 436 aa22.64■■□□□ 1.22
FXR2-201ENST00000250113 TM4SF1P30408 202 aa22.64■■□□□ 1.21
FXR2-201ENST00000250113 C11orf57Q6ZUT1 292 aaPredicted RBP22.64■■□□□ 1.21
FXR2-201ENST00000250113 MRPS27Q92552 414 aaKnown RBP22.64■■□□□ 1.21
FXR2-201ENST00000250113 SDF4Q9BRK5 362 aa22.64■■□□□ 1.21
FXR2-201ENST00000250113 UBAC1Q9BSL1 405 aa22.64■■□□□ 1.21
FXR2-201ENST00000250113 ANKIB1Q9P2G1 1089 aa22.64■■□□□ 1.21
FXR2-201ENST00000250113 BCORQ6W2J9 1755 aa22.64■■□□□ 1.21
FXR2-201ENST00000250113 SSRP1Q08945 709 aaKnown RBP22.63■■□□□ 1.21
FXR2-201ENST00000250113 SART3Q15020 963 aaKnown RBP22.63■■□□□ 1.21
FXR2-201ENST00000250113 ANO1Q5XXA6 986 aa22.63■■□□□ 1.21
FXR2-201ENST00000250113 BRAPQ7Z569 592 aa22.63■■□□□ 1.21
FXR2-201ENST00000250113 DOCK2Q92608 1830 aa22.63■■□□□ 1.21
FXR2-201ENST00000250113 hCG_1642624A0A1W2PR95 340 aa22.63■■□□□ 1.21
FXR2-201ENST00000250113 ADALQ6DHV7 355 aa22.63■■□□□ 1.21
FXR2-201ENST00000250113 USP17L12C9JPN9 530 aa22.62■■□□□ 1.21
FXR2-201ENST00000250113 USP17L21D6R901 530 aa22.62■■□□□ 1.21
FXR2-201ENST00000250113 TRIM29Q14134 588 aa22.62■■□□□ 1.21
FXR2-201ENST00000250113 NFIXQ14938 502 aa22.62■■□□□ 1.21
FXR2-201ENST00000250113 NSUN4Q96CB9 384 aaKnown RBP22.62■■□□□ 1.21
FXR2-201ENST00000250113 BTAF1O14981 1849 aa22.62■■□□□ 1.21
FXR2-201ENST00000250113 RTN1Q16799 776 aa22.62■■□□□ 1.21
FXR2-201ENST00000250113 POLR3EQ9NVU0 708 aa22.62■■□□□ 1.21
FXR2-201ENST00000250113 WDHD1O75717 1129 aaPredicted RBP22.61■■□□□ 1.21
FXR2-201ENST00000250113 ISM2Q6H9L7 571 aa22.61■■□□□ 1.21
FXR2-201ENST00000250113 SEPT12Q8IYM1 358 aa22.61■■□□□ 1.21
FXR2-201ENST00000250113 FMR1NBQ8N0W7 255 aaPredicted RBP22.61■■□□□ 1.21
FXR2-201ENST00000250113 TNKSO95271 1327 aa22.61■■□□□ 1.21
FXR2-201ENST00000250113 AFF2P51816 1311 aa22.61■■□□□ 1.21
FXR2-201ENST00000250113 RNF41Q9H4P4 317 aaPredicted RBP22.61■■□□□ 1.21
FXR2-201ENST00000250113 ZNF654Q8IZM8 581 aa22.6■■□□□ 1.21
FXR2-201ENST00000250113 KCNG4Q8TDN1 519 aa22.6■■□□□ 1.21
FXR2-201ENST00000250113 CICQ96RK0 1608 aaPredicted RBP22.6■■□□□ 1.21
FXR2-201ENST00000250113 LAMB2P55268 1798 aa22.6■■□□□ 1.21
FXR2-201ENST00000250113 BTBD18B2RXH4 712 aa22.6■■□□□ 1.21
FXR2-201ENST00000250113 C4AP0C0L4 1744 aa22.6■■□□□ 1.21
FXR2-201ENST00000250113 C4BP0C0L5 1744 aa22.6■■□□□ 1.21
FXR2-201ENST00000250113 CTR9Q6PD62 1173 aa22.59■■□□□ 1.21
FXR2-201ENST00000250113 NMT2O60551 498 aa22.59■■□□□ 1.21
FXR2-201ENST00000250113 CYP2D6P10635 497 aa22.59■■□□□ 1.21
FXR2-201ENST00000250113 ATP2B1P20020 1258 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms