RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 BICDL2A1A5D9 508 aa13.02□□□□□ -0.33
NOD1-201ENST00000222823 VWA3AA6NCI4 1184 aa13.02□□□□□ -0.33
NOD1-201ENST00000222823 SPDYE4A6NLX3 237 aa13.02□□□□□ -0.33
NOD1-201ENST00000222823 MYL5Q02045 173 aa13.02□□□□□ -0.33
NOD1-201ENST00000222823 TEX11Q8IYF3 940 aa13.02□□□□□ -0.33
NOD1-201ENST00000222823 MPHOSPH6Q99547 160 aaKnown RBP13.02□□□□□ -0.33
NOD1-201ENST00000222823 KRT86O43790 486 aa13.02□□□□□ -0.33
NOD1-201ENST00000222823 KRT83P78385 493 aa13.02□□□□□ -0.33
NOD1-201ENST00000222823 CNBD1Q8NA66 436 aa13.02□□□□□ -0.33
NOD1-201ENST00000222823 ARMT1Q9H993 441 aa13.02□□□□□ -0.33
NOD1-201ENST00000222823 PARP3Q9Y6F1 533 aa13.02□□□□□ -0.33
NOD1-201ENST00000222823 OVOS2A0A0J9YW53 1432 aa13.02□□□□□ -0.33
NOD1-201ENST00000222823 CRB1P82279 1406 aa13.02□□□□□ -0.33
NOD1-201ENST00000222823 OVOS2Q6IE36 1432 aa13.02□□□□□ -0.33
NOD1-201ENST00000222823 GTF2F1P35269 517 aaKnown RBP eCLIP13.02□□□□□ -0.33
NOD1-201ENST00000222823 ARID5AQ03989 594 aa13.02□□□□□ -0.33
NOD1-201ENST00000222823 TCHPQ9BT92 498 aa13.02□□□□□ -0.33
NOD1-201ENST00000222823 PRDM1O75626 825 aa13.01□□□□□ -0.33
NOD1-201ENST00000222823 SLU7O95391 586 aaKnown RBP13.01□□□□□ -0.33
NOD1-201ENST00000222823 DEXIO95424 95 aa13.01□□□□□ -0.33
NOD1-201ENST00000222823 ACTN2P35609 894 aa13.01□□□□□ -0.33
NOD1-201ENST00000222823 POLA2Q14181 598 aa13.01□□□□□ -0.33
NOD1-201ENST00000222823 PLIN2Q99541 437 aa13.01□□□□□ -0.33
NOD1-201ENST00000222823 SRRTQ9BXP5 876 aaKnown RBP13.01□□□□□ -0.33
NOD1-201ENST00000222823 LSG1Q9H089 658 aaKnown RBP13.01□□□□□ -0.33
NOD1-201ENST00000222823 NDUFB9Q9Y6M9 179 aa13.01□□□□□ -0.33
NOD1-201ENST00000222823 ELP1O95163 1332 aa13.01□□□□□ -0.33
NOD1-201ENST00000222823 KIF20BQ96Q89 1820 aa13.01□□□□□ -0.33
NOD1-201ENST00000222823 GOLGA6L10A0A0M3HER8 536 aa13.01□□□□□ -0.33
NOD1-201ENST00000222823 GADD45BO75293 160 aaPredicted RBP13.01□□□□□ -0.33
NOD1-201ENST00000222823 ZNF174Q15697 407 aa13.01□□□□□ -0.33
NOD1-201ENST00000222823 LPIN2Q92539 896 aa13.01□□□□□ -0.33
NOD1-201ENST00000222823 TECPR2O15040 1411 aa13.01□□□□□ -0.33
NOD1-201ENST00000222823 UBXN1Q04323 297 aa13.01□□□□□ -0.33
NOD1-201ENST00000222823 ANO1Q5XXA6 986 aa13.01□□□□□ -0.33
NOD1-201ENST00000222823 LUC7L2Q9Y383 392 aaKnown RBP13.01□□□□□ -0.33
NOD1-201ENST00000222823 PARP1P09874 1014 aaKnown RBP13□□□□□ -0.33
NOD1-201ENST00000222823 LETM2Q2VYF4 491 aa13□□□□□ -0.33
NOD1-201ENST00000222823 PHACTR2O75167 634 aa13□□□□□ -0.33
NOD1-201ENST00000222823 MRPL12P52815 198 aaKnown RBP13□□□□□ -0.33
NOD1-201ENST00000222823 MCM6Q14566 821 aa13□□□□□ -0.33
NOD1-201ENST00000222823 PAXIP1Q6ZW49 1069 aaPredicted RBP13□□□□□ -0.33
NOD1-201ENST00000222823 DIS3L2Q8IYB7 885 aaKnown RBP13□□□□□ -0.33
NOD1-201ENST00000222823 JDP2Q8WYK2 163 aa13□□□□□ -0.33
NOD1-201ENST00000222823 V9GY48 417 aaPredicted RBP13□□□□□ -0.33
NOD1-201ENST00000222823 CCNL1Q9UK58 526 aaPredicted RBP13□□□□□ -0.33
NOD1-201ENST00000222823 WWC3Q9ULE0 1092 aa13□□□□□ -0.33
NOD1-201ENST00000222823 CTAGE9A4FU28 777 aa13□□□□□ -0.33
NOD1-201ENST00000222823 TAF5LO75529 589 aa13□□□□□ -0.33
NOD1-201ENST00000222823 LMAN1P49257 510 aa13□□□□□ -0.33
NOD1-201ENST00000222823 OTUD7BQ6GQQ9 843 aa13□□□□□ -0.33
NOD1-201ENST00000222823 ZSWIM6Q9HCJ5 1215 aa13□□□□□ -0.33
NOD1-201ENST00000222823 CALCOCO1Q9P1Z2 691 aa13□□□□□ -0.33
NOD1-201ENST00000222823 ATP10DQ9P241 1426 aa12.99□□□□□ -0.33
NOD1-201ENST00000222823 MAP2P11137 1827 aaKnown RBP12.99□□□□□ -0.33
NOD1-201ENST00000222823 NEURL1BA8MQ27 555 aa12.99□□□□□ -0.33
NOD1-201ENST00000222823 UFL1O94874 794 aa12.99□□□□□ -0.33
NOD1-201ENST00000222823 FAM13AO94988 1023 aa12.99□□□□□ -0.33
NOD1-201ENST00000222823 RBM26Q5T8P6 1007 aaKnown RBP12.99□□□□□ -0.33
NOD1-201ENST00000222823 RNF187Q5TA31 235 aaPredicted RBP12.99□□□□□ -0.33
NOD1-201ENST00000222823 ARHGEF25Q86VW2 580 aa12.99□□□□□ -0.33
NOD1-201ENST00000222823 EAF2Q96CJ1 260 aaPredicted RBP12.99□□□□□ -0.33
NOD1-201ENST00000222823 SELENOOQ9BVL4 669 aa12.99□□□□□ -0.33
NOD1-201ENST00000222823 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.99□□□□□ -0.33
NOD1-201ENST00000222823 V9GYY5 206 aaPredicted RBP12.99□□□□□ -0.33
NOD1-201ENST00000222823 PTH1RQ03431 593 aa12.99□□□□□ -0.33
NOD1-201ENST00000222823 KRT222Q8N1A0 295 aa12.99□□□□□ -0.33
NOD1-201ENST00000222823 NEK11Q8NG66 645 aa12.99□□□□□ -0.33
NOD1-201ENST00000222823 LZTFL1Q9NQ48 299 aa12.99□□□□□ -0.33
NOD1-201ENST00000222823 KCNH3Q9ULD8 1083 aa12.99□□□□□ -0.33
NOD1-201ENST00000222823 ATP5JP18859 108 aa12.98□□□□□ -0.33
NOD1-201ENST00000222823 UBE4AQ14139 1066 aa12.98□□□□□ -0.33
NOD1-201ENST00000222823 MICALCLQ6ZW33 695 aa12.98□□□□□ -0.33
NOD1-201ENST00000222823 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.98□□□□□ -0.33
NOD1-201ENST00000222823 ZAP70P43403 619 aa12.98□□□□□ -0.33
NOD1-201ENST00000222823 KARSQ15046 597 aaKnown RBP12.98□□□□□ -0.33
NOD1-201ENST00000222823 SPATA31D1Q6ZQQ2 1576 aa12.98□□□□□ -0.33
NOD1-201ENST00000222823 CCDC87Q9NVE4 849 aa12.98□□□□□ -0.33
NOD1-201ENST00000222823 GUCA1BQ9UMX6 200 aa12.98□□□□□ -0.33
NOD1-201ENST00000222823 DTNBO60941 627 aa12.98□□□□□ -0.33
NOD1-201ENST00000222823 RASEFQ8IZ41 740 aa12.98□□□□□ -0.33
NOD1-201ENST00000222823 CEP112Q8N8E3 955 aa12.98□□□□□ -0.33
NOD1-201ENST00000222823 IMPG2Q9BZV3 1241 aa12.98□□□□□ -0.33
NOD1-201ENST00000222823 SAP30BPQ9UHR5 308 aaKnown RBP12.98□□□□□ -0.33
NOD1-201ENST00000222823 CNGA4Q8IV77 575 aa12.98□□□□□ -0.33
NOD1-201ENST00000222823 PI4K2BQ8TCG2 481 aa12.98□□□□□ -0.33
NOD1-201ENST00000222823 PLCD1P51178 756 aa12.97□□□□□ -0.33
NOD1-201ENST00000222823 WDR66Q8TBY9 1149 aa12.97□□□□□ -0.33
NOD1-201ENST00000222823 BBXQ8WY36 941 aaPredicted RBP12.97□□□□□ -0.33
NOD1-201ENST00000222823 EDC3Q96F86 508 aaKnown RBP12.97□□□□□ -0.33
NOD1-201ENST00000222823 SYNCQ9H7C4 482 aa12.97□□□□□ -0.33
NOD1-201ENST00000222823 MRVI1Q9Y6F6 885 aa12.97□□□□□ -0.33
NOD1-201ENST00000222823 NCOA3Q9Y6Q9 1424 aa12.97□□□□□ -0.33
NOD1-201ENST00000222823 PRPHP41219 470 aa12.97□□□□□ -0.33
NOD1-201ENST00000222823 TCIRG1Q13488 830 aa12.97□□□□□ -0.33
NOD1-201ENST00000222823 LEO1Q8WVC0 666 aaPredicted RBP12.97□□□□□ -0.33
NOD1-201ENST00000222823 DDX17Q92841 729 aaKnown RBP12.97□□□□□ -0.33
NOD1-201ENST00000222823 RBM17Q96I25 401 aaKnown RBP12.97□□□□□ -0.33
NOD1-201ENST00000222823 HSF2BPO75031 334 aa12.97□□□□□ -0.33
NOD1-201ENST00000222823 TERF1P54274 439 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms