RNA–Protein interactions for RNA: ENSMUST00000032168.6

Sec61a1-201, Transcript of Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sec61a1, Length 3,172 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1-201ENSMUST00000032168 Pfkfb1P70266 471 aa19.54■□□□□ 0.72
Sec61a1-201ENSMUST00000032168 Fchsd1Q6PFY1 688 aa19.54■□□□□ 0.72
Sec61a1-201ENSMUST00000032168 Gpr108Q91WD0 569 aa19.54■□□□□ 0.72
Sec61a1-201ENSMUST00000032168 1700018B08RikQ9DA83 213 aa19.54■□□□□ 0.72
Sec61a1-201ENSMUST00000032168 Tbc1d8Q9Z1A9 1134 aa19.54■□□□□ 0.72
Sec61a1-201ENSMUST00000032168 EzrP26040 586 aaKnown RBP19.54■□□□□ 0.72
Sec61a1-201ENSMUST00000032168 XpcP51612 930 aa19.54■□□□□ 0.72
Sec61a1-201ENSMUST00000032168 NfixP70257 488 aa19.54■□□□□ 0.72
Sec61a1-201ENSMUST00000032168 Cdca8Q8BHX3 289 aa19.54■□□□□ 0.72
Sec61a1-201ENSMUST00000032168 Zfp202Q8C879 641 aa19.54■□□□□ 0.72
Sec61a1-201ENSMUST00000032168 Tfcp2Q9ERA0 502 aa19.54■□□□□ 0.72
Sec61a1-201ENSMUST00000032168 Stx1aO35526 288 aa19.53■□□□□ 0.72
Sec61a1-201ENSMUST00000032168 Foxp1P58462 705 aa19.53■□□□□ 0.72
Sec61a1-201ENSMUST00000032168 Slc51aQ8R000 340 aa19.53■□□□□ 0.72
Sec61a1-201ENSMUST00000032168 Yeats4Q9CR11 227 aaKnown RBP19.53■□□□□ 0.72
Sec61a1-201ENSMUST00000032168 Arhgap33Q80YF9 1305 aa19.53■□□□□ 0.72
Sec61a1-201ENSMUST00000032168 Gas2l3Q3UWW6 683 aa19.53■□□□□ 0.72
Sec61a1-201ENSMUST00000032168 Mum1l1Q4VA55 681 aa19.53■□□□□ 0.72
Sec61a1-201ENSMUST00000032168 Lonrf3Q9D4H7 753 aa19.53■□□□□ 0.72
Sec61a1-201ENSMUST00000032168 Large1Q9Z1M7 756 aa19.53■□□□□ 0.72
Sec61a1-201ENSMUST00000032168 Duox1A2AQ92 1551 aa19.53■□□□□ 0.72
Sec61a1-201ENSMUST00000032168 Zscan29E9Q5B4 869 aa19.52■□□□□ 0.72
Sec61a1-201ENSMUST00000032168 Oas2E9Q9A9 742 aa19.52■□□□□ 0.72
Sec61a1-201ENSMUST00000032168 Afg3l2Q8JZQ2 802 aaKnown RBP19.52■□□□□ 0.72
Sec61a1-201ENSMUST00000032168 AfdnQ9QZQ1 1820 aaKnown RBP19.52■□□□□ 0.72
Sec61a1-201ENSMUST00000032168 Grin1P35438 938 aa19.52■□□□□ 0.72
Sec61a1-201ENSMUST00000032168 Ctr9Q62018 1173 aaKnown RBP19.52■□□□□ 0.72
Sec61a1-201ENSMUST00000032168 Arid5bQ8BM75 1188 aaKnown RBP19.52■□□□□ 0.72
Sec61a1-201ENSMUST00000032168 Telo2Q9DC40 840 aaKnown RBP19.52■□□□□ 0.72
Sec61a1-201ENSMUST00000032168 Myh6Q02566 1938 aaKnown RBP19.52■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Klhl34A2AI76 644 aa19.52■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 TbcaP48428 108 aaKnown RBP19.52■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Prl2c1Q5SVL9 228 aa19.52■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Pcdhb14Q6PB90 796 aa19.52■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Dhx40Q6PE54 779 aaKnown RBP19.52■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Zfyve9A2A8R0 1397 aa19.52■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Gm43638A0A0J9YU36 694 aa19.51■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Pdia4P08003 638 aaKnown RBP19.51■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Il15P48346 162 aa19.51■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Rbm10Q99KG3 930 aaKnown RBP19.51■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 RarsQ9D0I9 660 aaKnown RBP19.51■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Znf653Q6YND2 615 aa19.51■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Ubac1Q8VDI7 409 aa19.51■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Stk39Q9Z1W9 556 aa19.51■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Gm36210A0A1B0GS00 229 aa19.5■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 A0A1W2P7S8 802 aa19.5■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Gm5592Q3V0A6 857 aa19.5■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Ckap2Q3V1H1 664 aa19.5■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Cdc5lQ6A068 802 aaKnown RBP19.5■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Vps37dQ810I0 261 aa19.5■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Uba5Q8VE47 403 aa19.5■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Zcrb1Q9CZ96 217 aaKnown RBP19.5■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Adgra3Q7TT36 1310 aa19.5■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 A0A1Y7VML8 143 aa19.5■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Cspp1B2RX88 1205 aa19.5■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 4930523C07RikE9Q2T4 99 aa19.5■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Myo1bP46735 1107 aa19.5■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Sec23aQ01405 765 aa19.5■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Rnf41Q8BH75 317 aa19.5■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Wdr64Q9D565 1086 aa19.5■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Prr16A3KMN5 304 aa19.5■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 PnnO35691 725 aaKnown RBP19.5■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Usp50Q6P8X6 390 aa19.5■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Pus7lQ8CE46 702 aa19.5■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Paf1Q8K2T8 535 aa19.5■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Amhr2Q8K592 568 aa19.5■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 NenfQ9CQ45 171 aa19.5■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Hmgn5Q9JL35 406 aa19.5■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 CoblQ5NBX1 1337 aaKnown RBP19.49■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 U2af2P26369 475 aaKnown RBP19.49■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Ehmt1Q5DW34 1296 aa19.49■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Prpf4bQ61136 1007 aaKnown RBP19.49■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Haus7Q8BKT8 364 aa19.49■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Rrp9Q91WM3 475 aaKnown RBP19.49■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Cep89Q9CZX2 791 aa19.49■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Akt1s1Q9D1F4 257 aa19.49■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Gm10134F6ZQC6 126 aa19.49■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Nbr1P97432 988 aa19.49■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Rbm28Q8CGC6 750 aaKnown RBP19.49■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Cavin1O54724 392 aa19.48■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Kif3aP28741 701 aa19.48■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Rec8Q8C5S7 591 aa19.48■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Plcd3Q8K2J0 785 aa19.48■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Luzp1Q8R4U7 1068 aaKnown RBP19.48■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Usp53P15975 1069 aa19.48■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Mtx1P47802 317 aa19.48■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Tbc1d31Q6NXY1 996 aa19.48■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Atxn2lQ7TQH0 1049 aaKnown RBP19.48■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Q8BZJ8 459 aa19.48■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Kcnk13Q8R1P5 405 aa19.48■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Rbm19Q8R3C6 952 aaKnown RBP19.48■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Nop2Q922K7 793 aaKnown RBP19.48■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Fam89aQ14BJ1 175 aa19.47■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Gpatch11Q3UFS4 262 aa19.47■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Nup133Q8R0G9 1155 aa19.47■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Serpina10Q8R121 448 aa19.47■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Ubn2Q80WC1 1314 aa19.47■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 1700013D24RikQ0P521 120 aa19.47■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 VmacQ8BP01 174 aa19.47■□□□□ 0.71
Sec61a1-201ENSMUST00000032168 Vnn1Q9Z0K8 512 aa19.47■□□□□ 0.71
Retrieved 100 of 22,080 RNA–protein pairs in 24.5 ms