RNA–Protein interactions for RNA: ENSMUST00000023426.11

Cldnd1-201, Transcript of Claudin domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cldnd1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1-201ENSMUST00000023426 Xpo4Q9ESJ0 1151 aa28.55■■■□□ 2.16
Cldnd1-201ENSMUST00000023426 Stk39Q9Z1W9 556 aa28.55■■■□□ 2.16
Cldnd1-201ENSMUST00000023426 Pde4bB1AWC9 736 aa28.54■■■□□ 2.16
Cldnd1-201ENSMUST00000023426 Prpf4bQ61136 1007 aaKnown RBP28.54■■■□□ 2.16
Cldnd1-201ENSMUST00000023426 Ccdc39Q9D5Y1 937 aa28.54■■■□□ 2.16
Cldnd1-201ENSMUST00000023426 Zscan29E9Q5B4 869 aa28.54■■■□□ 2.16
Cldnd1-201ENSMUST00000023426 Haus7Q8BKT8 364 aa28.54■■■□□ 2.16
Cldnd1-201ENSMUST00000023426 Serpina10Q8R121 448 aa28.54■■■□□ 2.16
Cldnd1-201ENSMUST00000023426 Kcnh3Q9WVJ0 1095 aa28.54■■■□□ 2.16
Cldnd1-201ENSMUST00000023426 Nup98Q6PFD9 1816 aaKnown RBP28.53■■■□□ 2.16
Cldnd1-201ENSMUST00000023426 Tnni2P13412 182 aa28.53■■■□□ 2.16
Cldnd1-201ENSMUST00000023426 Anks1aP59672 1150 aa28.53■■■□□ 2.16
Cldnd1-201ENSMUST00000023426 Sec23aQ01405 765 aa28.53■■■□□ 2.16
Cldnd1-201ENSMUST00000023426 Kcnd1Q03719 651 aa28.53■■■□□ 2.16
Cldnd1-201ENSMUST00000023426 Sept9Q80UG5 583 aa28.53■■■□□ 2.16
Cldnd1-201ENSMUST00000023426 Tspyl4Q8VD63 406 aa28.53■■■□□ 2.16
Cldnd1-201ENSMUST00000023426 Ankrd63A2ARS0 390 aa28.52■■■□□ 2.16
Cldnd1-201ENSMUST00000023426 Ces1hD3Z298 562 aa28.52■■■□□ 2.16
Cldnd1-201ENSMUST00000023426 Rhbdl3P58873 404 aa28.52■■■□□ 2.16
Cldnd1-201ENSMUST00000023426 Bsdc1Q80Y55 427 aa28.52■■■□□ 2.16
Cldnd1-201ENSMUST00000023426 Arid5bQ8BM75 1188 aaKnown RBP28.52■■■□□ 2.16
Cldnd1-201ENSMUST00000023426 Smc2Q8CG48 1191 aaKnown RBP28.52■■■□□ 2.16
Cldnd1-201ENSMUST00000023426 Casp1P29452 402 aa28.52■■■□□ 2.16
Cldnd1-201ENSMUST00000023426 IntuQ059U7 942 aa28.52■■■□□ 2.16
Cldnd1-201ENSMUST00000023426 Ccdc94Q9D6J3 314 aa28.52■■■□□ 2.16
Cldnd1-201ENSMUST00000023426 Gja10Q9WUS4 505 aa28.52■■■□□ 2.16
Cldnd1-201ENSMUST00000023426 Grin2dQ03391 1323 aa28.52■■■□□ 2.16
Cldnd1-201ENSMUST00000023426 Zscan20B2KFW1 1030 aa28.51■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Gpatch11Q3UFS4 262 aa28.51■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Sf3b2Q3UJB0 878 aaKnown RBP28.51■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Sh3bp5lQ99LH9 392 aa28.51■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Popdc2Q9ES82 367 aa28.51■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Zbtb21E9Q444 1094 aa28.51■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Rbm15bQ6PHZ5 887 aaKnown RBP28.51■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Kcnj14Q8JZN3 434 aa28.51■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Eif4enif1Q9EST3 983 aaKnown RBP28.51■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Large1Q9Z1M7 756 aa28.51■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 A0A1W2P7S8 802 aa28.5■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Tom1O88746 492 aa28.5■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Cdc5lQ6A068 802 aaKnown RBP28.5■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Bap1Q99PU7 728 aa28.5■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Aox3G3X982 1335 aa28.5■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Myo1bP46735 1107 aa28.49■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 CtifQ6PEE2 600 aaKnown RBP28.49■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Kif1bpQ6ZPU9 617 aa28.49■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Cep89Q9CZX2 791 aa28.49■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Ppp1r21Q3TDD9 780 aa28.49■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Ehmt1Q5DW34 1296 aa28.49■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Slc27a1Q60714 646 aa28.49■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 McamQ8R2Y2 648 aaKnown RBP28.49■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Krt23Q99PS0 422 aa28.49■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 CpvlQ9D3S9 478 aa28.49■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Cacna1sQ02789 1880 aa28.48■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Atp1b3P97370 278 aa28.48■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Cyp7b1Q60991 507 aa28.48■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Cep120Q7TSG1 988 aa28.48■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 CerkQ8K4Q7 531 aa28.48■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Sass6Q80UK7 654 aa28.48■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Cfap69Q8BH53 942 aa28.48■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Nek3Q9R0A5 511 aa28.48■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Ktn1Q61595 1327 aaKnown RBP28.48■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Slc7a1Q09143 622 aa28.47■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Prl2c1Q5SVL9 228 aa28.47■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Glis3Q6XP49 780 aa28.47■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Ehd2Q8BH64 543 aa28.47■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 MbipQ99LQ1 341 aa28.47■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Myh6Q02566 1938 aaKnown RBP28.47■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Clec16aQ80U30 1036 aa28.46■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Lgr5Q9Z1P4 907 aa28.46■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Cyp3a25O09158 503 aa28.46■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 SsbP32067 415 aaKnown RBP28.46■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Otop3Q80UF9 577 aa28.46■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Efcc1Q9JJF6 558 aa28.46■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 AfdnQ9QZQ1 1820 aaKnown RBP28.46■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Duox1A2AQ92 1551 aa28.45■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Atp8b5A3FIN4 1183 aa28.45■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Calm1P0DP26 149 aaKnown RBP28.45■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Calm2P0DP27 149 aaKnown RBP28.45■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Calm3P0DP28 149 aaKnown RBP28.45■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 PsdQ5DTT2 1024 aa28.45■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Abcf1Q6P542 837 aaKnown RBP28.45■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Vnn1Q9Z0K8 512 aa28.45■■■□□ 2.15
Cldnd1-201ENSMUST00000023426 Gm13023A2A8N2 498 aa28.45■■■□□ 2.14
Cldnd1-201ENSMUST00000023426 Il15P48346 162 aa28.45■■■□□ 2.14
Cldnd1-201ENSMUST00000023426 Dynll1P63168 89 aa28.45■■■□□ 2.14
Cldnd1-201ENSMUST00000023426 Nxf2Q4ZGD8 691 aa28.45■■■□□ 2.14
Cldnd1-201ENSMUST00000023426 Usp13Q5BKP2 858 aa28.45■■■□□ 2.14
Cldnd1-201ENSMUST00000023426 Cep135Q6P5D4 1140 aa28.45■■■□□ 2.14
Cldnd1-201ENSMUST00000023426 Zfp251Q6PCX8 632 aa28.45■■■□□ 2.14
Cldnd1-201ENSMUST00000023426 Pla2g12bQ99P27 195 aa28.45■■■□□ 2.14
Cldnd1-201ENSMUST00000023426 Bcl11bQ99PV8 884 aa28.45■■■□□ 2.14
Cldnd1-201ENSMUST00000023426 Myo3bQ1EG27 1305 aa28.44■■■□□ 2.14
Cldnd1-201ENSMUST00000023426 Snapc4Q8BP86 1333 aa28.44■■■□□ 2.14
Cldnd1-201ENSMUST00000023426 CebpaP53566 359 aa28.44■■■□□ 2.14
Cldnd1-201ENSMUST00000023426 Rps8P62242 208 aaKnown RBP28.44■■■□□ 2.14
Cldnd1-201ENSMUST00000023426 Spata5Q3UMC0 893 aaKnown RBP28.44■■■□□ 2.14
Cldnd1-201ENSMUST00000023426 HelbQ6NVF4 1074 aa28.44■■■□□ 2.14
Cldnd1-201ENSMUST00000023426 Znf653Q6YND2 615 aa28.44■■■□□ 2.14
Cldnd1-201ENSMUST00000023426 Luc7l2Q7TNC4 392 aaKnown RBP28.44■■■□□ 2.14
Cldnd1-201ENSMUST00000023426 Olfr119Q7TRJ5 321 aa28.44■■■□□ 2.14
Retrieved 100 of 22,080 RNA–protein pairs in 45.7 ms