RNA–Protein interactions for RNA: ENST00000538197.5

CPEB2-209, Transcript of cytoplasmic polyadenylation element binding protein 2, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CPEB2, Length 6,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB2-209ENST00000538197 FAM9BQ8IZU0 186 aa20.52■□□□□ 0.87
CPEB2-209ENST00000538197 LAS1LQ9Y4W2 734 aaKnown RBP20.51■□□□□ 0.87
CPEB2-209ENST00000538197 GOLGA2Q08379 1002 aa20.5■□□□□ 0.87
CPEB2-209ENST00000538197 SENP3-EIF4A1A0A087X0R7 540 aa20.49■□□□□ 0.87
CPEB2-209ENST00000538197 WDR43Q15061 677 aaKnown RBP eCLIP20.48■□□□□ 0.87
CPEB2-209ENST00000538197 MYH16Q9H6N6 1097 aa20.46■□□□□ 0.87
CPEB2-209ENST00000538197 GTF3C3Q9Y5Q9 886 aa20.45■□□□□ 0.86
CPEB2-209ENST00000538197 UPF2Q9HAU5 1272 aaKnown RBP20.43■□□□□ 0.86
CPEB2-209ENST00000538197 KRI1Q8N9T8 703 aaKnown RBP20.41■□□□□ 0.86
CPEB2-209ENST00000538197 NAP1L2Q9ULW6 460 aaPredicted RBP20.4■□□□□ 0.86
CPEB2-209ENST00000538197 KLHL34Q8N239 644 aa20.4■□□□□ 0.86
CPEB2-209ENST00000538197 ANP32AP39687 249 aaKnown RBP20.39■□□□□ 0.86
CPEB2-209ENST00000538197 ANO8Q9HCE9 1232 aaPredicted RBP20.39■□□□□ 0.85
CPEB2-209ENST00000538197 ZNF330Q9Y3S2 320 aaPredicted RBP20.39■□□□□ 0.85
CPEB2-209ENST00000538197 RGL3Q3MIN7 710 aa20.34■□□□□ 0.85
CPEB2-209ENST00000538197 EIF5BO60841 1220 aaKnown RBP20.29■□□□□ 0.84
CPEB2-209ENST00000538197 TSPY4P0CV99 314 aa20.29■□□□□ 0.84
CPEB2-209ENST00000538197 TSPY10P0CW01 314 aa20.29■□□□□ 0.84
CPEB2-209ENST00000538197 TNNT2P45379 298 aaPredicted RBP20.29■□□□□ 0.84
CPEB2-209ENST00000538197 MSH5O43196 834 aa20.27■□□□□ 0.83
CPEB2-209ENST00000538197 PAK3O75914 559 aaPredicted RBP20.25■□□□□ 0.83
CPEB2-209ENST00000538197 OS9Q13438 667 aaPredicted RBP20.25■□□□□ 0.83
CPEB2-209ENST00000538197 MEX3CQ5U5Q3 659 aaKnown RBP20.25■□□□□ 0.83
CPEB2-209ENST00000538197 ERCC6Q03468 1493 aa20.24■□□□□ 0.83
CPEB2-209ENST00000538197 POGKQ9P215 609 aa20.24■□□□□ 0.83
CPEB2-209ENST00000538197 G3V3G9 751 aa20.24■□□□□ 0.83
CPEB2-209ENST00000538197 DCAF8Q5TAQ9 597 aa20.24■□□□□ 0.83
CPEB2-209ENST00000538197 TMX4Q9H1E5 349 aaPredicted RBP20.24■□□□□ 0.83
CPEB2-209ENST00000538197 TONSLQ96HA7 1378 aa20.22■□□□□ 0.83
CPEB2-209ENST00000538197 PDE4CQ08493 712 aa20.21■□□□□ 0.83
CPEB2-209ENST00000538197 NBR1Q14596 966 aa20.21■□□□□ 0.83
CPEB2-209ENST00000538197 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.2■□□□□ 0.82
CPEB2-209ENST00000538197 NCLP19338 710 aaKnown RBP20.18■□□□□ 0.82
CPEB2-209ENST00000538197 ZRSR1Q15695 479 aaKnown RBP20.18■□□□□ 0.82
CPEB2-209ENST00000538197 NEUROD2Q15784 382 aa20.18■□□□□ 0.82
CPEB2-209ENST00000538197 HIRIP3Q9BW71 556 aaPredicted RBP20.18■□□□□ 0.82
CPEB2-209ENST00000538197 CSB-PGBD3P0DP91 1061 aa20.18■□□□□ 0.82
CPEB2-209ENST00000538197 SAFB2Q14151 953 aaKnown RBP eCLIP20.16■□□□□ 0.82
CPEB2-209ENST00000538197 HNRNPUQ00839 825 aaKnown RBP eCLIP20.15■□□□□ 0.82
CPEB2-209ENST00000538197 RRP7BPQ9NSQ0 103 aa20.12■□□□□ 0.81
CPEB2-209ENST00000538197 IRX6P78412 446 aaPredicted RBP20.11■□□□□ 0.81
CPEB2-209ENST00000538197 FBXO3Q9UK99 471 aa20.1■□□□□ 0.81
CPEB2-209ENST00000538197 DCAF8L1A6NGE4 600 aa20.1■□□□□ 0.81
CPEB2-209ENST00000538197 FGD1P98174 961 aa20.1■□□□□ 0.81
CPEB2-209ENST00000538197 DDX10Q13206 875 aaKnown RBP20.07■□□□□ 0.8
CPEB2-209ENST00000538197 SCRIBQ14160 1630 aa20.05■□□□□ 0.8
CPEB2-209ENST00000538197 FKBP8Q14318 412 aa20.04■□□□□ 0.8
CPEB2-209ENST00000538197 ZCCHC6Q5VYS8 1495 aaKnown RBP20.03■□□□□ 0.8
CPEB2-209ENST00000538197 KCNJ4P48050 445 aa20■□□□□ 0.79
CPEB2-209ENST00000538197 PLCB2Q00722 1185 aa20■□□□□ 0.79
CPEB2-209ENST00000538197 STK26Q9P289 416 aa20■□□□□ 0.79
CPEB2-209ENST00000538197 U2SURPO15042 1029 aaKnown RBP19.99■□□□□ 0.79
CPEB2-209ENST00000538197 CASC1Q6TDU7 716 aa19.97■□□□□ 0.79
CPEB2-209ENST00000538197 FTSJ3Q8IY81 847 aaKnown RBP19.97■□□□□ 0.79
CPEB2-209ENST00000538197 PLEKHD1A6NEE1 506 aa19.95■□□□□ 0.79
CPEB2-209ENST00000538197 CCDC136Q96JN2 1154 aa19.95■□□□□ 0.78
CPEB2-209ENST00000538197 CSRNP3Q8WYN3 585 aa19.95■□□□□ 0.78
CPEB2-209ENST00000538197 WWC1Q8IX03 1113 aa19.94■□□□□ 0.78
CPEB2-209ENST00000538197 VPS53Q5VIR6 699 aa19.93■□□□□ 0.78
CPEB2-209ENST00000538197 MAPK8IP3Q9UPT6 1336 aa19.93■□□□□ 0.78
CPEB2-209ENST00000538197 CFAP53Q96M91 514 aa19.93■□□□□ 0.78
CPEB2-209ENST00000538197 CHMP3Q9Y3E7 222 aa19.92■□□□□ 0.78
CPEB2-209ENST00000538197 CNKSR2Q8WXI2 1034 aa19.92■□□□□ 0.78
CPEB2-209ENST00000538197 MTUS2Q5JR59 1369 aa19.91■□□□□ 0.78
CPEB2-209ENST00000538197 EIF4G2P78344 907 aaKnown RBP eCLIP19.9■□□□□ 0.78
CPEB2-209ENST00000538197 PPP1R1BQ9UD71 204 aaPredicted RBP19.89■□□□□ 0.78
CPEB2-209ENST00000538197 FBXW7Q969H0 707 aa19.88■□□□□ 0.77
CPEB2-209ENST00000538197 SRPK2P78362 688 aaKnown RBP19.88■□□□□ 0.77
CPEB2-209ENST00000538197 MRS2Q9HD23 443 aa19.88■□□□□ 0.77
CPEB2-209ENST00000538197 PTMAP06454 111 aaKnown RBP19.88■□□□□ 0.77
CPEB2-209ENST00000538197 CWC22Q9HCG8 908 aaKnown RBP19.87■□□□□ 0.77
CPEB2-209ENST00000538197 RAD21O60216 631 aa19.85■□□□□ 0.77
CPEB2-209ENST00000538197 ERICH6BQ5W0A0 696 aa19.85■□□□□ 0.77
CPEB2-209ENST00000538197 GNL2Q13823 731 aaKnown RBP19.84■□□□□ 0.77
CPEB2-209ENST00000538197 GGT6Q6P531 493 aa19.84■□□□□ 0.77
CPEB2-209ENST00000538197 FRAT1Q92837 279 aaPredicted RBP19.83■□□□□ 0.77
CPEB2-209ENST00000538197 APBB1O00213 710 aa19.83■□□□□ 0.76
CPEB2-209ENST00000538197 CC2D1BQ5T0F9 858 aaKnown RBP19.83■□□□□ 0.76
CPEB2-209ENST00000538197 NUTM2FA1L443 756 aa19.83■□□□□ 0.76
CPEB2-209ENST00000538197 TRIM44Q96DX7 344 aaPredicted RBP19.82■□□□□ 0.76
CPEB2-209ENST00000538197 DCAF1Q9Y4B6 1507 aa19.82■□□□□ 0.76
CPEB2-209ENST00000538197 DNTTIP2Q5QJE6 756 aaKnown RBP19.81■□□□□ 0.76
CPEB2-209ENST00000538197 NUTM2DQ5VT03 806 aaPredicted RBP19.8■□□□□ 0.76
CPEB2-209ENST00000538197 GTF2E1P29083 439 aaPredicted RBP19.8■□□□□ 0.76
CPEB2-209ENST00000538197 KNSTRNQ9Y448 316 aa19.8■□□□□ 0.76
CPEB2-209ENST00000538197 EVA1CP58658 441 aa19.78■□□□□ 0.76
CPEB2-209ENST00000538197 TAF7LQ5H9L4 462 aa19.78■□□□□ 0.76
CPEB2-209ENST00000538197 FRAT2O75474 233 aaPredicted RBP19.77■□□□□ 0.76
CPEB2-209ENST00000538197 SAMD1Q6SPF0 538 aaPredicted RBP19.77■□□□□ 0.76
CPEB2-209ENST00000538197 RTF1Q92541 710 aaKnown RBP19.76■□□□□ 0.75
CPEB2-209ENST00000538197 CCDC180Q9P1Z9 1646 aa19.76■□□□□ 0.75
CPEB2-209ENST00000538197 LTV1Q96GA3 475 aaPredicted RBP19.75■□□□□ 0.75
CPEB2-209ENST00000538197 HDGFP51858 240 aaKnown RBP19.73■□□□□ 0.75
CPEB2-209ENST00000538197 ACIN1Q9UKV3 1341 aaKnown RBP19.71■□□□□ 0.75
CPEB2-209ENST00000538197 SYTL4Q96C24 671 aaPredicted RBP19.71■□□□□ 0.75
CPEB2-209ENST00000538197 EIF4G1Q04637 1599 aaKnown RBP19.7■□□□□ 0.74
CPEB2-209ENST00000538197 NUDCQ9Y266 331 aa19.7■□□□□ 0.74
CPEB2-209ENST00000538197 CFDP1Q9UEE9 299 aaPredicted RBP19.7■□□□□ 0.74
CPEB2-209ENST00000538197 GORABQ5T7V8 394 aa19.7■□□□□ 0.74
CPEB2-209ENST00000538197 CREBRFQ8IUR6 639 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms