RNA–Protein interactions for RNA: ENST00000524596.1

LIN7C-202, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN7C, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-202ENST00000524596 NEFMP07197 916 aa9.45□□□□□ -0.9
LIN7C-202ENST00000524596 TRIM26Q12899 539 aaPredicted RBP9.45□□□□□ -0.9
LIN7C-202ENST00000524596 ARID3AQ99856 593 aa9.45□□□□□ -0.9
LIN7C-202ENST00000524596 PATL2C9JE40 543 aaKnown RBP9.45□□□□□ -0.9
LIN7C-202ENST00000524596 CLSTN1O94985 981 aa9.44□□□□□ -0.9
LIN7C-202ENST00000524596 HSP90AA1P07900 732 aaKnown RBP9.43□□□□□ -0.9
LIN7C-202ENST00000524596 PLCB2Q00722 1185 aa9.43□□□□□ -0.9
LIN7C-202ENST00000524596 ZBTB7CA1YPR0 619 aa9.43□□□□□ -0.9
LIN7C-202ENST00000524596 TMEM132AQ24JP5 1023 aa9.42□□□□□ -0.9
LIN7C-202ENST00000524596 PLCD4Q9BRC7 762 aa9.41□□□□□ -0.9
LIN7C-202ENST00000524596 CNKSR2Q8WXI2 1034 aa9.4□□□□□ -0.9
LIN7C-202ENST00000524596 CFAP44Q96MT7 982 aa9.39□□□□□ -0.91
LIN7C-202ENST00000524596 AAMPQ13685 434 aa9.39□□□□□ -0.91
LIN7C-202ENST00000524596 NAP1L2Q9ULW6 460 aaPredicted RBP9.39□□□□□ -0.91
LIN7C-202ENST00000524596 NBR1Q14596 966 aa9.36□□□□□ -0.91
LIN7C-202ENST00000524596 BBXQ8WY36 941 aaPredicted RBP9.36□□□□□ -0.91
LIN7C-202ENST00000524596 IRX6P78412 446 aaPredicted RBP9.35□□□□□ -0.91
LIN7C-202ENST00000524596 LAS1LQ9Y4W2 734 aaKnown RBP9.35□□□□□ -0.91
LIN7C-202ENST00000524596 WWC1Q8IX03 1113 aa9.34□□□□□ -0.91
LIN7C-202ENST00000524596 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.33□□□□□ -0.92
LIN7C-202ENST00000524596 SLC4A1APQ9BWU0 796 aaKnown RBP9.32□□□□□ -0.92
LIN7C-202ENST00000524596 ANP32AP39687 249 aaKnown RBP9.31□□□□□ -0.92
LIN7C-202ENST00000524596 AEBP2Q6ZN18 517 aaPredicted RBP9.31□□□□□ -0.92
LIN7C-202ENST00000524596 SAMD1Q6SPF0 538 aaPredicted RBP9.31□□□□□ -0.92
LIN7C-202ENST00000524596 USP35Q9P2H5 1018 aa9.3□□□□□ -0.92
LIN7C-202ENST00000524596 PPM1GO15355 546 aaPredicted RBP9.3□□□□□ -0.92
LIN7C-202ENST00000524596 LOC105371045A0A1W2PR82 267 aa9.28□□□□□ -0.92
LIN7C-202ENST00000524596 RSPH4AQ5TD94 716 aa9.28□□□□□ -0.92
LIN7C-202ENST00000524596 OS9Q13438 667 aaPredicted RBP9.28□□□□□ -0.92
LIN7C-202ENST00000524596 DNTTIP2Q5QJE6 756 aaKnown RBP9.28□□□□□ -0.92
LIN7C-202ENST00000524596 ZNF592Q92610 1267 aa9.27□□□□□ -0.93
LIN7C-202ENST00000524596 TSHZ2Q9NRE2 1034 aa9.26□□□□□ -0.93
LIN7C-202ENST00000524596 CLGNO14967 610 aa9.26□□□□□ -0.93
LIN7C-202ENST00000524596 RRP9O43818 475 aaKnown RBP9.26□□□□□ -0.93
LIN7C-202ENST00000524596 UBTFP17480 764 aaKnown RBP9.25□□□□□ -0.93
LIN7C-202ENST00000524596 TICAM2Q86XR7 235 aa9.25□□□□□ -0.93
LIN7C-202ENST00000524596 FAM193AP78312 1265 aa9.25□□□□□ -0.93
LIN7C-202ENST00000524596 IPO4Q8TEX9 1081 aaKnown RBP9.24□□□□□ -0.93
LIN7C-202ENST00000524596 FTSJ3Q8IY81 847 aaKnown RBP9.24□□□□□ -0.93
LIN7C-202ENST00000524596 CNPY4Q8N129 248 aa9.22□□□□□ -0.93
LIN7C-202ENST00000524596 CHMP4BQ9H444 224 aaKnown RBP9.22□□□□□ -0.93
LIN7C-202ENST00000524596 CALRP27797 417 aaKnown RBP9.21□□□□□ -0.94
LIN7C-202ENST00000524596 PRDM10Q9NQV6 1147 aa9.21□□□□□ -0.94
LIN7C-202ENST00000524596 ZBTB47Q9UFB7 747 aaPredicted RBP9.2□□□□□ -0.94
LIN7C-202ENST00000524596 SETQ01105 290 aaPredicted RBP9.19□□□□□ -0.94
LIN7C-202ENST00000524596 CC2D1BQ5T0F9 858 aaKnown RBP9.19□□□□□ -0.94
LIN7C-202ENST00000524596 AXDND1Q5T1B0 1012 aaPredicted RBP9.19□□□□□ -0.94
LIN7C-202ENST00000524596 PNNQ9H307 717 aaKnown RBP9.18□□□□□ -0.94
LIN7C-202ENST00000524596 IRX3P78415 501 aaPredicted RBP9.18□□□□□ -0.94
LIN7C-202ENST00000524596 TAF3Q5VWG9 929 aa9.18□□□□□ -0.94
LIN7C-202ENST00000524596 RBM19Q9Y4C8 960 aaKnown RBP9.17□□□□□ -0.94
LIN7C-202ENST00000524596 ZFP91Q96JP5 570 aaPredicted RBP9.15□□□□□ -0.94
LIN7C-202ENST00000524596 TEX2Q8IWB9 1127 aa9.15□□□□□ -0.95
LIN7C-202ENST00000524596 GPATCH11Q8N954 259 aa9.14□□□□□ -0.95
LIN7C-202ENST00000524596 TNNT3P45378 269 aaPredicted RBP9.14□□□□□ -0.95
LIN7C-202ENST00000524596 NOP58Q9Y2X3 529 aaKnown RBP9.14□□□□□ -0.95
LIN7C-202ENST00000524596 ZNF622Q969S3 477 aaKnown RBP eCLIP9.13□□□□□ -0.95
LIN7C-202ENST00000524596 MCCP23508 829 aa9.12□□□□□ -0.95
LIN7C-202ENST00000524596 SUPT16HQ9Y5B9 1047 aaKnown RBP9.1□□□□□ -0.95
LIN7C-202ENST00000524596 SSR1P43307 286 aaKnown RBP9.1□□□□□ -0.95
LIN7C-202ENST00000524596 PUS7Q96PZ0 661 aaKnown RBP9.09□□□□□ -0.95
LIN7C-202ENST00000524596 MAP7D2Q96T17 732 aa9.09□□□□□ -0.95
LIN7C-202ENST00000524596 ANAPC15P60006 121 aa9.08□□□□□ -0.96
LIN7C-202ENST00000524596 IL27Q8NEV9 243 aa9.08□□□□□ -0.96
LIN7C-202ENST00000524596 NPM1P06748 294 aaKnown RBP eCLIP9.07□□□□□ -0.96
LIN7C-202ENST00000524596 RBM25P49756 843 aaKnown RBP9.07□□□□□ -0.96
LIN7C-202ENST00000524596 NISCHQ9Y2I1 1504 aa9.06□□□□□ -0.96
LIN7C-202ENST00000524596 ANP32CO43423 234 aa9.05□□□□□ -0.96
LIN7C-202ENST00000524596 FANCIQ9NVI1 1328 aa9.05□□□□□ -0.96
LIN7C-202ENST00000524596 FKBP8Q14318 412 aa9.04□□□□□ -0.96
LIN7C-202ENST00000524596 RAD21O60216 631 aa9.03□□□□□ -0.96
LIN7C-202ENST00000524596 PLCD3Q8N3E9 789 aa9.03□□□□□ -0.96
LIN7C-202ENST00000524596 ATP1B4Q9UN42 357 aaPredicted RBP9.03□□□□□ -0.96
LIN7C-202ENST00000524596 PHF14O94880 888 aa9.03□□□□□ -0.96
LIN7C-202ENST00000524596 FAM9BQ8IZU0 186 aa9.03□□□□□ -0.96
LIN7C-202ENST00000524596 HDAC5Q9UQL6 1122 aa9.03□□□□□ -0.96
LIN7C-202ENST00000524596 CWC22Q9HCG8 908 aaKnown RBP9.02□□□□□ -0.97
LIN7C-202ENST00000524596 SECISBP2LQ93073 1101 aaKnown RBP9.01□□□□□ -0.97
LIN7C-202ENST00000524596 FAM43AQ8N2R8 423 aa9.01□□□□□ -0.97
LIN7C-202ENST00000524596 MTERF4Q7Z6M4 381 aaKnown RBP9.01□□□□□ -0.97
LIN7C-202ENST00000524596 FAM50AQ14320 339 aaKnown RBP9□□□□□ -0.97
LIN7C-202ENST00000524596 CASC1Q6TDU7 716 aa9□□□□□ -0.97
LIN7C-202ENST00000524596 CALD1Q05682 793 aaKnown RBP9□□□□□ -0.97
LIN7C-202ENST00000524596 HMGB1P1B2RPK0 211 aaPredicted RBP8.99□□□□□ -0.97
LIN7C-202ENST00000524596 L1TD1Q5T7N2 865 aaKnown RBP8.99□□□□□ -0.97
LIN7C-202ENST00000524596 IGSF3O75054 1194 aa8.99□□□□□ -0.97
LIN7C-202ENST00000524596 BRPF3Q9ULD4 1205 aa8.99□□□□□ -0.97
LIN7C-202ENST00000524596 DNAJC2Q99543 621 aaKnown RBP8.97□□□□□ -0.97
LIN7C-202ENST00000524596 MAPK8IP2Q13387 824 aaPredicted RBP8.95□□□□□ -0.98
LIN7C-202ENST00000524596 PAIP2Q9BPZ3 127 aaKnown RBP8.95□□□□□ -0.98
LIN7C-202ENST00000524596 KCTD17Q8N5Z5 321 aa8.95□□□□□ -0.98
LIN7C-202ENST00000524596 PDCL3Q9H2J4 239 aa8.95□□□□□ -0.98
LIN7C-202ENST00000524596 TPM2P07951 284 aa8.94□□□□□ -0.98
LIN7C-202ENST00000524596 CERS3Q8IU89 383 aa8.94□□□□□ -0.98
LIN7C-202ENST00000524596 GOLGA6L3A6NEY3 463 aa8.93□□□□□ -0.98
LIN7C-202ENST00000524596 AEBP1Q8IUX7 1158 aa8.93□□□□□ -0.98
LIN7C-202ENST00000524596 ARID4AP29374 1257 aaPredicted RBP8.92□□□□□ -0.98
LIN7C-202ENST00000524596 RBM28Q9NW13 759 aaKnown RBP8.92□□□□□ -0.98
LIN7C-202ENST00000524596 TMX4Q9H1E5 349 aaPredicted RBP8.92□□□□□ -0.98
LIN7C-202ENST00000524596 RGS3P49796 1198 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 375.5 ms