RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 CANXP27824 592 aaKnown RBP7.17□□□□□ -1.26
R3HDM1-204ENST00000410054 SHROOM4Q9ULL8 1493 aa7.16□□□□□ -1.26
R3HDM1-204ENST00000410054 SCAF1Q9H7N4 1312 aaKnown RBP7.16□□□□□ -1.26
R3HDM1-204ENST00000410054 TRIM26Q12899 539 aaPredicted RBP7.16□□□□□ -1.26
R3HDM1-204ENST00000410054 PLCD4Q9BRC7 762 aa7.15□□□□□ -1.27
R3HDM1-204ENST00000410054 PCGF6Q9BYE7 350 aa7.15□□□□□ -1.27
R3HDM1-204ENST00000410054 TMEM132AQ24JP5 1023 aa7.14□□□□□ -1.27
R3HDM1-204ENST00000410054 NEFMP07197 916 aa7.13□□□□□ -1.27
R3HDM1-204ENST00000410054 BCCIPQ9P287 314 aaKnown RBP eCLIP7.13□□□□□ -1.27
R3HDM1-204ENST00000410054 CLSTN1O94985 981 aa7.12□□□□□ -1.27
R3HDM1-204ENST00000410054 IRX6P78412 446 aaPredicted RBP7.12□□□□□ -1.27
R3HDM1-204ENST00000410054 OS9Q13438 667 aaPredicted RBP7.12□□□□□ -1.27
R3HDM1-204ENST00000410054 RBM25P49756 843 aaKnown RBP7.09□□□□□ -1.27
R3HDM1-204ENST00000410054 WWC1Q8IX03 1113 aa7.07□□□□□ -1.28
R3HDM1-204ENST00000410054 AEBP1Q8IUX7 1158 aa7.07□□□□□ -1.28
R3HDM1-204ENST00000410054 HSP90AA1P07900 732 aaKnown RBP7.07□□□□□ -1.28
R3HDM1-204ENST00000410054 UBTFP17480 764 aaKnown RBP7.05□□□□□ -1.28
R3HDM1-204ENST00000410054 HSP90AA2PQ14568 343 aaPredicted RBP7.05□□□□□ -1.28
R3HDM1-204ENST00000410054 DNTTIP2Q5QJE6 756 aaKnown RBP7.04□□□□□ -1.28
R3HDM1-204ENST00000410054 RSPH6AQ9H0K4 717 aa7.04□□□□□ -1.28
R3HDM1-204ENST00000410054 PPP1R1BQ9UD71 204 aaPredicted RBP7.04□□□□□ -1.28
R3HDM1-204ENST00000410054 TNNT3P45378 269 aaPredicted RBP7.03□□□□□ -1.28
R3HDM1-204ENST00000410054 ZNF592Q92610 1267 aa7.03□□□□□ -1.28
R3HDM1-204ENST00000410054 RAD21O60216 631 aa7.03□□□□□ -1.28
R3HDM1-204ENST00000410054 FGD1P98174 961 aa7.02□□□□□ -1.28
R3HDM1-204ENST00000410054 LMOD2Q6P5Q4 547 aa7.02□□□□□ -1.29
R3HDM1-204ENST00000410054 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.01□□□□□ -1.29
R3HDM1-204ENST00000410054 RBM10P98175 930 aaKnown RBP7□□□□□ -1.29
R3HDM1-204ENST00000410054 ANP32AP39687 249 aaKnown RBP7□□□□□ -1.29
R3HDM1-204ENST00000410054 ANP32CO43423 234 aa7□□□□□ -1.29
R3HDM1-204ENST00000410054 STK11IPQ8N1F8 1099 aa6.99□□□□□ -1.29
R3HDM1-204ENST00000410054 BBXQ8WY36 941 aaPredicted RBP6.98□□□□□ -1.29
R3HDM1-204ENST00000410054 HMGB1P1B2RPK0 211 aaPredicted RBP6.97□□□□□ -1.29
R3HDM1-204ENST00000410054 PRDM10Q9NQV6 1147 aa6.97□□□□□ -1.29
R3HDM1-204ENST00000410054 NAP1L2Q9ULW6 460 aaPredicted RBP6.97□□□□□ -1.29
R3HDM1-204ENST00000410054 SALL2Q9Y467 1007 aaPredicted RBP6.97□□□□□ -1.29
R3HDM1-204ENST00000410054 FAM193AP78312 1265 aa6.96□□□□□ -1.29
R3HDM1-204ENST00000410054 TMX4Q9H1E5 349 aaPredicted RBP6.96□□□□□ -1.3
R3HDM1-204ENST00000410054 FAM9BQ8IZU0 186 aa6.96□□□□□ -1.3
R3HDM1-204ENST00000410054 PPARGC1BQ86YN6 1023 aaKnown RBP6.95□□□□□ -1.3
R3HDM1-204ENST00000410054 CNKSR2Q8WXI2 1034 aa6.95□□□□□ -1.3
R3HDM1-204ENST00000410054 KCTD17Q8N5Z5 321 aa6.95□□□□□ -1.3
R3HDM1-204ENST00000410054 ZMYND15Q9H091 742 aa6.95□□□□□ -1.3
R3HDM1-204ENST00000410054 MEX3CQ5U5Q3 659 aaKnown RBP6.94□□□□□ -1.3
R3HDM1-204ENST00000410054 NEFHP12036 1026 aa6.94□□□□□ -1.3
R3HDM1-204ENST00000410054 CC2D1BQ5T0F9 858 aaKnown RBP6.94□□□□□ -1.3
R3HDM1-204ENST00000410054 GPATCH11Q8N954 259 aa6.94□□□□□ -1.3
R3HDM1-204ENST00000410054 CLGNO14967 610 aa6.93□□□□□ -1.3
R3HDM1-204ENST00000410054 TICAM2Q86XR7 235 aa6.92□□□□□ -1.3
R3HDM1-204ENST00000410054 AEBP2Q6ZN18 517 aaPredicted RBP6.92□□□□□ -1.3
R3HDM1-204ENST00000410054 FAM50AQ14320 339 aaKnown RBP6.91□□□□□ -1.3
R3HDM1-204ENST00000410054 SSR1P43307 286 aaKnown RBP6.91□□□□□ -1.3
R3HDM1-204ENST00000410054 CNPY4Q8N129 248 aa6.9□□□□□ -1.3
R3HDM1-204ENST00000410054 NOL8Q76FK4 1167 aaKnown RBP6.9□□□□□ -1.3
R3HDM1-204ENST00000410054 NEUROD2Q15784 382 aa6.9□□□□□ -1.31
R3HDM1-204ENST00000410054 TAF3Q5VWG9 929 aa6.89□□□□□ -1.31
R3HDM1-204ENST00000410054 SETQ01105 290 aaPredicted RBP6.89□□□□□ -1.31
R3HDM1-204ENST00000410054 LOC105371045A0A1W2PR82 267 aa6.87□□□□□ -1.31
R3HDM1-204ENST00000410054 SAMD1Q6SPF0 538 aaPredicted RBP6.87□□□□□ -1.31
R3HDM1-204ENST00000410054 CWC22Q9HCG8 908 aaKnown RBP6.87□□□□□ -1.31
R3HDM1-204ENST00000410054 ANAPC15P60006 121 aa6.87□□□□□ -1.31
R3HDM1-204ENST00000410054 IRX3P78415 501 aaPredicted RBP6.87□□□□□ -1.31
R3HDM1-204ENST00000410054 FBXW7Q969H0 707 aa6.87□□□□□ -1.31
R3HDM1-204ENST00000410054 TMCO4Q5TGY1 634 aa6.86□□□□□ -1.31
R3HDM1-204ENST00000410054 NEUROD1Q13562 356 aa6.85□□□□□ -1.31
R3HDM1-204ENST00000410054 AXDND1Q5T1B0 1012 aaPredicted RBP6.85□□□□□ -1.31
R3HDM1-204ENST00000410054 CHMP4BQ9H444 224 aaKnown RBP6.85□□□□□ -1.31
R3HDM1-204ENST00000410054 ZBTB47Q9UFB7 747 aaPredicted RBP6.85□□□□□ -1.31
R3HDM1-204ENST00000410054 RRP9O43818 475 aaKnown RBP6.84□□□□□ -1.31
R3HDM1-204ENST00000410054 L1TD1Q5T7N2 865 aaKnown RBP6.84□□□□□ -1.31
R3HDM1-204ENST00000410054 FTSJ3Q8IY81 847 aaKnown RBP6.84□□□□□ -1.31
R3HDM1-204ENST00000410054 E9PSI1 815 aa6.84□□□□□ -1.31
R3HDM1-204ENST00000410054 PNNQ9H307 717 aaKnown RBP6.84□□□□□ -1.31
R3HDM1-204ENST00000410054 DIEXFQ68CQ4 756 aaKnown RBP6.83□□□□□ -1.32
R3HDM1-204ENST00000410054 GOLGA6L22H0YM25 854 aa6.83□□□□□ -1.32
R3HDM1-204ENST00000410054 AAMPQ13685 434 aa6.83□□□□□ -1.32
R3HDM1-204ENST00000410054 ZFP91Q96JP5 570 aaPredicted RBP6.83□□□□□ -1.32
R3HDM1-204ENST00000410054 GOLGA6L6A8MZA4 724 aa6.82□□□□□ -1.32
R3HDM1-204ENST00000410054 PAIP2Q9BPZ3 127 aaKnown RBP6.82□□□□□ -1.32
R3HDM1-204ENST00000410054 WDR70Q9NW82 654 aa6.82□□□□□ -1.32
R3HDM1-204ENST00000410054 ZNF622Q969S3 477 aaKnown RBP eCLIP6.8□□□□□ -1.322e-6■■□□□ 13.9
R3HDM1-204ENST00000410054 FBLN2P98095 1184 aa6.8□□□□□ -1.32
R3HDM1-204ENST00000410054 GORABQ5T7V8 394 aa6.8□□□□□ -1.32
R3HDM1-204ENST00000410054 ARID4AP29374 1257 aaPredicted RBP6.79□□□□□ -1.32
R3HDM1-204ENST00000410054 WDR78Q5VTH9 848 aa6.79□□□□□ -1.32
R3HDM1-204ENST00000410054 CASC1Q6TDU7 716 aa6.79□□□□□ -1.32
R3HDM1-204ENST00000410054 MCCP23508 829 aa6.79□□□□□ -1.32
R3HDM1-204ENST00000410054 IPO4Q8TEX9 1081 aaKnown RBP6.79□□□□□ -1.32
R3HDM1-204ENST00000410054 GOLGA6L1Q8N7Z2 621 aa6.78□□□□□ -1.32
R3HDM1-204ENST00000410054 FOXD4L5Q5VV16 416 aaPredicted RBP6.77□□□□□ -1.33
R3HDM1-204ENST00000410054 PLCD3Q8N3E9 789 aa6.77□□□□□ -1.33
R3HDM1-204ENST00000410054 FOXD4L4Q8WXT5 416 aaPredicted RBP6.77□□□□□ -1.33
R3HDM1-204ENST00000410054 PUS7Q96PZ0 661 aaKnown RBP6.77□□□□□ -1.33
R3HDM1-204ENST00000410054 APBB1O00213 710 aa6.77□□□□□ -1.33
R3HDM1-204ENST00000410054 NPM1P06748 294 aaKnown RBP eCLIP6.77□□□□□ -1.33
R3HDM1-204ENST00000410054 MAPK8IP2Q13387 824 aaPredicted RBP6.77□□□□□ -1.33
R3HDM1-204ENST00000410054 ARID3CA6NKF2 412 aa6.75□□□□□ -1.33
R3HDM1-204ENST00000410054 RSPH4AQ5TD94 716 aa6.74□□□□□ -1.33
R3HDM1-204ENST00000410054 CHMP3Q9Y3E7 222 aa6.74□□□□□ -1.33
R3HDM1-204ENST00000410054 SPRYD3Q8NCJ5 442 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms