RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 DNTTIP2Q5QJE6 756 aaKnown RBP10.4□□□□□ -0.74
HTT-201ENST00000355072 NOP58Q9Y2X3 529 aaKnown RBP10.39□□□□□ -0.75
HTT-201ENST00000355072 BCANQ96GW7 911 aa10.39□□□□□ -0.75
HTT-201ENST00000355072 PTMAP06454 111 aaKnown RBP10.39□□□□□ -0.75
HTT-201ENST00000355072 PHF14O94880 888 aa10.38□□□□□ -0.75
HTT-201ENST00000355072 PPARGC1BQ86YN6 1023 aaKnown RBP10.38□□□□□ -0.75
HTT-201ENST00000355072 GOLGA6L3A6NEY3 463 aa10.37□□□□□ -0.75
HTT-201ENST00000355072 NBR1Q14596 966 aa10.36□□□□□ -0.75
HTT-201ENST00000355072 WDR43Q15061 677 aaKnown RBP eCLIP10.36□□□□□ -0.75
HTT-201ENST00000355072 PHLDB1Q86UU1 1377 aa10.36□□□□□ -0.75
HTT-201ENST00000355072 CEP164Q9UPV0 1460 aa10.35□□□□□ -0.75
HTT-201ENST00000355072 SETQ01105 290 aaPredicted RBP10.34□□□□□ -0.75
HTT-201ENST00000355072 RB1CC1Q8TDY2 1594 aa10.34□□□□□ -0.75
HTT-201ENST00000355072 NAP1L5Q96NT1 182 aaPredicted RBP10.34□□□□□ -0.75
HTT-201ENST00000355072 FHAD1B1AJZ9 1412 aa10.34□□□□□ -0.75
HTT-201ENST00000355072 BCL11AQ9H165 835 aa10.33□□□□□ -0.76
HTT-201ENST00000355072 GOLGA6L1Q8N7Z2 621 aa10.33□□□□□ -0.76
HTT-201ENST00000355072 CEP162Q5TB80 1403 aa10.33□□□□□ -0.76
HTT-201ENST00000355072 HTATSF1O43719 755 aaKnown RBP10.32□□□□□ -0.76
HTT-201ENST00000355072 NPM2Q86SE8 214 aaKnown RBP10.32□□□□□ -0.76
HTT-201ENST00000355072 LOC105371045A0A1W2PR82 267 aa10.32□□□□□ -0.76
HTT-201ENST00000355072 CLIP1P30622 1438 aa10.31□□□□□ -0.76
HTT-201ENST00000355072 CCDC34Q96HJ3 373 aa10.31□□□□□ -0.76
HTT-201ENST00000355072 CHMP4AQ9BY43 222 aa10.31□□□□□ -0.76
HTT-201ENST00000355072 PPP4R2Q9NY27 417 aa10.31□□□□□ -0.76
HTT-201ENST00000355072 CNGB1Q14028 1251 aaPredicted RBP10.3□□□□□ -0.76
HTT-201ENST00000355072 KIAA2012Q0VF49 1180 aa10.3□□□□□ -0.76
HTT-201ENST00000355072 TNNT3P45378 269 aaPredicted RBP10.3□□□□□ -0.76
HTT-201ENST00000355072 NACADO15069 1562 aa10.29□□□□□ -0.76
HTT-201ENST00000355072 TAF3Q5VWG9 929 aa10.29□□□□□ -0.76
HTT-201ENST00000355072 SCAF1Q9H7N4 1312 aaKnown RBP10.29□□□□□ -0.76
HTT-201ENST00000355072 GBP4Q96PP9 640 aa10.28□□□□□ -0.76
HTT-201ENST00000355072 MRS2Q9HD23 443 aa10.28□□□□□ -0.76
HTT-201ENST00000355072 EIF4G2P78344 907 aaKnown RBP eCLIP10.28□□□□□ -0.762e-6■■■■■ 31.3
HTT-201ENST00000355072 MAP7D2Q96T17 732 aa10.28□□□□□ -0.76
HTT-201ENST00000355072 CSPP1Q1MSJ5 1256 aa10.28□□□□□ -0.76
HTT-201ENST00000355072 GOLGA6L4A6NEF3 574 aa10.26□□□□□ -0.77
HTT-201ENST00000355072 MCCP23508 829 aa10.26□□□□□ -0.77
HTT-201ENST00000355072 ROCK2O75116 1388 aaKnown RBP10.25□□□□□ -0.77
HTT-201ENST00000355072 CHMP4CQ96CF2 233 aa10.25□□□□□ -0.77
HTT-201ENST00000355072 HSCBQ8IWL3 235 aa10.25□□□□□ -0.77
HTT-201ENST00000355072 CCER2I3L3R5 266 aa10.25□□□□□ -0.77
HTT-201ENST00000355072 SCRIBQ14160 1630 aa10.24□□□□□ -0.77
HTT-201ENST00000355072 HSP90AA2PQ14568 343 aaPredicted RBP10.24□□□□□ -0.77
HTT-201ENST00000355072 CSRNP3Q8WYN3 585 aa10.24□□□□□ -0.77
HTT-201ENST00000355072 SKOR2Q2VWA4 1001 aaPredicted RBP10.24□□□□□ -0.77
HTT-201ENST00000355072 CFAP53Q96M91 514 aa10.23□□□□□ -0.77
HTT-201ENST00000355072 GPS2Q13227 327 aa10.23□□□□□ -0.77
HTT-201ENST00000355072 DDX11L8A8MPP1 907 aa10.22□□□□□ -0.77
HTT-201ENST00000355072 NOM1Q5C9Z4 860 aaKnown RBP10.22□□□□□ -0.77
HTT-201ENST00000355072 DHX8Q14562 1220 aaKnown RBP10.22□□□□□ -0.77
HTT-201ENST00000355072 FTSJ3Q8IY81 847 aaKnown RBP10.21□□□□□ -0.78
HTT-201ENST00000355072 KIF3AQ9Y496 699 aa10.21□□□□□ -0.78
HTT-201ENST00000355072 MTUS2Q5JR59 1369 aa10.21□□□□□ -0.78
HTT-201ENST00000355072 ABCC9O60706 1549 aa10.21□□□□□ -0.78
HTT-201ENST00000355072 AAMPQ13685 434 aa10.2□□□□□ -0.78
HTT-201ENST00000355072 TEX35Q5T0J7 233 aa10.2□□□□□ -0.78
HTT-201ENST00000355072 EIF3AQ14152 1382 aaKnown RBP10.19□□□□□ -0.78
HTT-201ENST00000355072 TPM4P67936 248 aa10.19□□□□□ -0.78
HTT-201ENST00000355072 ATP6V1DQ9Y5K8 247 aa10.19□□□□□ -0.78
HTT-201ENST00000355072 ANO8Q9HCE9 1232 aaPredicted RBP10.19□□□□□ -0.78
HTT-201ENST00000355072 TCERG1O14776 1098 aaKnown RBP10.17□□□□□ -0.78
HTT-201ENST00000355072 TNIKQ9UKE5 1360 aa10.17□□□□□ -0.78
HTT-201ENST00000355072 HDAC5Q9UQL6 1122 aa10.17□□□□□ -0.78
HTT-201ENST00000355072 KNSTRNQ9Y448 316 aa10.16□□□□□ -0.78
HTT-201ENST00000355072 ISY1Q9ULR0 285 aaKnown RBP10.16□□□□□ -0.78
HTT-201ENST00000355072 CALD1Q05682 793 aaKnown RBP10.15□□□□□ -0.78
HTT-201ENST00000355072 CCDC70Q6NSX1 233 aa10.15□□□□□ -0.78
HTT-201ENST00000355072 DEKP35659 375 aaKnown RBP10.15□□□□□ -0.79
HTT-201ENST00000355072 NGEFQ8N5V2 710 aa10.14□□□□□ -0.79
HTT-201ENST00000355072 CWC15Q9P013 229 aaKnown RBP10.14□□□□□ -0.79
HTT-201ENST00000355072 CCDC66A2RUB6 948 aa10.14□□□□□ -0.79
HTT-201ENST00000355072 FAM9BQ8IZU0 186 aa10.13□□□□□ -0.79
HTT-201ENST00000355072 SUPT16HQ9Y5B9 1047 aaKnown RBP10.13□□□□□ -0.79
HTT-201ENST00000355072 KTN1Q86UP2 1357 aaKnown RBP10.13□□□□□ -0.79
HTT-201ENST00000355072 MYO15BQ96JP2 1530 aa10.12□□□□□ -0.79
HTT-201ENST00000355072 TSPYL1Q9H0U9 437 aa10.12□□□□□ -0.79
HTT-201ENST00000355072 NUDCQ9Y266 331 aa10.11□□□□□ -0.79
HTT-201ENST00000355072 HSP90AB1P08238 724 aaKnown RBP10.11□□□□□ -0.79
HTT-201ENST00000355072 MAPK8IP3Q9UPT6 1336 aa10.11□□□□□ -0.79
HTT-201ENST00000355072 KIF27Q86VH2 1401 aa10.11□□□□□ -0.79
HTT-201ENST00000355072 FANCIQ9NVI1 1328 aa10.1□□□□□ -0.79
HTT-201ENST00000355072 BAZ1BQ9UIG0 1483 aaKnown RBP10.1□□□□□ -0.79
HTT-201ENST00000355072 PDE3BQ13370 1112 aa10.1□□□□□ -0.79
HTT-201ENST00000355072 KIF16BQ96L93 1317 aa10.1□□□□□ -0.79
HTT-201ENST00000355072 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.1□□□□□ -0.79
HTT-201ENST00000355072 CAVIN1Q6NZI2 390 aaKnown RBP10.09□□□□□ -0.79
HTT-201ENST00000355072 ARHGAP35Q9NRY4 1499 aa10.09□□□□□ -0.79
HTT-201ENST00000355072 IPO9Q96P70 1041 aaKnown RBP10.09□□□□□ -0.79
HTT-201ENST00000355072 DDX10Q13206 875 aaKnown RBP10.09□□□□□ -0.79
HTT-201ENST00000355072 ACBD3Q9H3P7 528 aa10.09□□□□□ -0.79
HTT-201ENST00000355072 IPO8O15397 1037 aaKnown RBP10.08□□□□□ -0.8
HTT-201ENST00000355072 PKNOX2Q96KN3 472 aa10.08□□□□□ -0.8
HTT-201ENST00000355072 TPM3P06753 285 aa10.08□□□□□ -0.8
HTT-201ENST00000355072 HMMRO75330 724 aa10.07□□□□□ -0.8
HTT-201ENST00000355072 ESF1Q9H501 851 aaKnown RBP10.07□□□□□ -0.8
HTT-201ENST00000355072 CAGE1Q8TC20 777 aa10.07□□□□□ -0.8
HTT-201ENST00000355072 IL27Q8NEV9 243 aa10.07□□□□□ -0.8
HTT-201ENST00000355072 DRC7Q8IY82 874 aa10.06□□□□□ -0.8
HTT-201ENST00000355072 CDR1P51861 262 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms