RNA–Protein interactions for RNA: ENSMUST00000068992.7

Pcdh9-201, Transcript of Protocadherin 9, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Pcdh9, Length 3,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9-201ENSMUST00000068992 Ncoa2Q61026 1462 aa12.39□□□□□ -0.43
Pcdh9-201ENSMUST00000068992 Grin2bQ01097 1482 aa12.37□□□□□ -0.43
Pcdh9-201ENSMUST00000068992 Tubgcp6G5E8P0 1769 aa12.37□□□□□ -0.43
Pcdh9-201ENSMUST00000068992 Camsap2Q8C1B1 1461 aa12.36□□□□□ -0.43
Pcdh9-201ENSMUST00000068992 Baz1bQ9Z277 1479 aa12.36□□□□□ -0.43
Pcdh9-201ENSMUST00000068992 Kif21aQ9QXL2 1672 aa12.36□□□□□ -0.43
Pcdh9-201ENSMUST00000068992 Urb2E9Q7L1 1524 aaKnown RBP12.35□□□□□ -0.43
Pcdh9-201ENSMUST00000068992 Arhgef12Q8R4H2 1543 aaKnown RBP12.35□□□□□ -0.43
Pcdh9-201ENSMUST00000068992 UacaQ8CGB3 1411 aa12.33□□□□□ -0.44
Pcdh9-201ENSMUST00000068992 Znf710Q3U288 666 aa12.31□□□□□ -0.44
Pcdh9-201ENSMUST00000068992 Gm1043A0A140LJC2 1431 aa12.3□□□□□ -0.44
Pcdh9-201ENSMUST00000068992 Gcc2Q8CHG3 1679 aa12.3□□□□□ -0.44
Pcdh9-201ENSMUST00000068992 SynmQ70IV5 1561 aa12.29□□□□□ -0.44
Pcdh9-201ENSMUST00000068992 Samd9lQ69Z37 1561 aa12.27□□□□□ -0.44
Pcdh9-201ENSMUST00000068992 Dhx29Q6PGC1 1365 aaKnown RBP12.26□□□□□ -0.45
Pcdh9-201ENSMUST00000068992 Hnrnpul2Q00PI9 745 aaKnown RBP12.25□□□□□ -0.45
Pcdh9-201ENSMUST00000068992 Ppargc1bQ8VHJ7 1014 aa12.25□□□□□ -0.45
Pcdh9-201ENSMUST00000068992 Zcchc11B2RX14 1644 aaKnown RBP12.25□□□□□ -0.45
Pcdh9-201ENSMUST00000068992 Abca5Q8K448 1642 aa12.24□□□□□ -0.45
Pcdh9-201ENSMUST00000068992 Lmtk2Q3TYD6 1471 aa12.24□□□□□ -0.45
Pcdh9-201ENSMUST00000068992 Gm38655A0A286YDK6 273 aa12.23□□□□□ -0.45
Pcdh9-201ENSMUST00000068992 Naip2Q9QUK4 1447 aa12.22□□□□□ -0.45
Pcdh9-201ENSMUST00000068992 Clip1Q922J3 1391 aa12.22□□□□□ -0.45
Pcdh9-201ENSMUST00000068992 Naip5Q9R016 1403 aa12.21□□□□□ -0.45
Pcdh9-201ENSMUST00000068992 SafbD3YXK2 937 aaKnown RBP12.2□□□□□ -0.46
Pcdh9-201ENSMUST00000068992 SphkapQ6NSW3 1687 aa12.19□□□□□ -0.46
Pcdh9-201ENSMUST00000068992 Gm7298A0A0N4SVU1 1476 aa12.18□□□□□ -0.46
Pcdh9-201ENSMUST00000068992 Efcab5A0JP43 1406 aa12.17□□□□□ -0.46
Pcdh9-201ENSMUST00000068992 Kif14L0N7N1 1674 aaKnown RBP12.17□□□□□ -0.46
Pcdh9-201ENSMUST00000068992 A2mQ6GQT1 1474 aa12.17□□□□□ -0.46
Pcdh9-201ENSMUST00000068992 UbtfP25976 765 aaKnown RBP12.17□□□□□ -0.46
Pcdh9-201ENSMUST00000068992 Kdm6bQ5NCY0 1641 aa12.17□□□□□ -0.46
Pcdh9-201ENSMUST00000068992 Nop58Q6DFW4 536 aaKnown RBP12.16□□□□□ -0.46
Pcdh9-201ENSMUST00000068992 Eea1Q8BL66 1411 aa12.16□□□□□ -0.46
Pcdh9-201ENSMUST00000068992 Lamc1P02468 1607 aaKnown RBP12.16□□□□□ -0.46
Pcdh9-201ENSMUST00000068992 TonslQ6NZL6 1363 aa12.14□□□□□ -0.47
Pcdh9-201ENSMUST00000068992 Cdc42bpaQ3UU96 1719 aa12.14□□□□□ -0.47
Pcdh9-201ENSMUST00000068992 Supt6hQ62383 1726 aaKnown RBP12.14□□□□□ -0.47
Pcdh9-201ENSMUST00000068992 Ankrd36D3Z4K0 1415 aa12.13□□□□□ -0.47
Pcdh9-201ENSMUST00000068992 BlmO88700 1416 aa12.13□□□□□ -0.47
Pcdh9-201ENSMUST00000068992 Plekhg3Q4VAC9 1341 aa12.12□□□□□ -0.47
Pcdh9-201ENSMUST00000068992 Cdk11bP24788 784 aaKnown RBP12.11□□□□□ -0.47
Pcdh9-201ENSMUST00000068992 Mbd5B1AYB6 1498 aa12.11□□□□□ -0.47
Pcdh9-201ENSMUST00000068992 Fhad1A6PWD2 1420 aa12.11□□□□□ -0.47
Pcdh9-201ENSMUST00000068992 Vps8Q0P5W1 1427 aa12.11□□□□□ -0.47
Pcdh9-201ENSMUST00000068992 Adamts12Q811B3 1600 aa12.07□□□□□ -0.48
Pcdh9-201ENSMUST00000068992 Abca16E9PWJ7 1678 aa12.06□□□□□ -0.48
Pcdh9-201ENSMUST00000068992 Las1lA2BE28 776 aaKnown RBP12.06□□□□□ -0.48
Pcdh9-201ENSMUST00000068992 Pds5bQ4VA53 1446 aaKnown RBP12.05□□□□□ -0.48
Pcdh9-201ENSMUST00000068992 Fam135aQ6NS59 1506 aa12.04□□□□□ -0.48
Pcdh9-201ENSMUST00000068992 Fam71e1A1L3C1 212 aa12.04□□□□□ -0.48
Pcdh9-201ENSMUST00000068992 Iqgap1Q9JKF1 1657 aaKnown RBP12.03□□□□□ -0.48
Pcdh9-201ENSMUST00000068992 Magi3Q9EQJ9 1476 aa12.02□□□□□ -0.49
Pcdh9-201ENSMUST00000068992 Pla2r1Q62028 1487 aa12.02□□□□□ -0.49
Pcdh9-201ENSMUST00000068992 BC005561E9Q5E2 1589 aa12.01□□□□□ -0.49
Pcdh9-201ENSMUST00000068992 Trpm2Q91YD4 1506 aa12□□□□□ -0.49
Pcdh9-201ENSMUST00000068992 Mapk8ip2Q9ERE9 830 aa11.99□□□□□ -0.49
Pcdh9-201ENSMUST00000068992 Setd5Q5XJV7 1441 aa11.99□□□□□ -0.49
Pcdh9-201ENSMUST00000068992 Map3k4O08648 1597 aa11.98□□□□□ -0.49
Pcdh9-201ENSMUST00000068992 Mug1P28665 1476 aa11.98□□□□□ -0.49
Pcdh9-201ENSMUST00000068992 Egfem1Q8C088 590 aa11.98□□□□□ -0.49
Pcdh9-201ENSMUST00000068992 AlkP97793 1621 aa11.98□□□□□ -0.49
Pcdh9-201ENSMUST00000068992 Ncoa1P70365 1447 aa11.96□□□□□ -0.49
Pcdh9-201ENSMUST00000068992 PogzQ8BZH4 1409 aaKnown RBP11.96□□□□□ -0.49
Pcdh9-201ENSMUST00000068992 Ifnlr1Q8CGK5 535 aa11.96□□□□□ -0.5
Pcdh9-201ENSMUST00000068992 Arhgef40Q3UPH7 1517 aa11.95□□□□□ -0.5
Pcdh9-201ENSMUST00000068992 Duox2A2AQ99 1517 aa11.95□□□□□ -0.5
Pcdh9-201ENSMUST00000068992 Ap3b1Q9Z1T1 1105 aa11.95□□□□□ -0.5
Pcdh9-201ENSMUST00000068992 WizO88286 1684 aaKnown RBP11.95□□□□□ -0.5
Pcdh9-201ENSMUST00000068992 Washc2Q6PGL7 1334 aa11.94□□□□□ -0.5
Pcdh9-201ENSMUST00000068992 Nolc1E9Q5C9 702 aaKnown RBP11.94□□□□□ -0.5
Pcdh9-201ENSMUST00000068992 Tarbp1E9Q368 1579 aa11.94□□□□□ -0.5
Pcdh9-201ENSMUST00000068992 Liat1Q810M6 228 aa11.94□□□□□ -0.5
Pcdh9-201ENSMUST00000068992 Eid3Q3V124 375 aa11.93□□□□□ -0.5
Pcdh9-201ENSMUST00000068992 EprsQ8CGC7 1512 aaKnown RBP11.92□□□□□ -0.5
Pcdh9-201ENSMUST00000068992 Kiaa1551Q5DTW7 1521 aa11.91□□□□□ -0.5
Pcdh9-201ENSMUST00000068992 Abcc2Q8VI47 1543 aa11.91□□□□□ -0.5
Pcdh9-201ENSMUST00000068992 Smg6P61406 1418 aaKnown RBP11.91□□□□□ -0.5
Pcdh9-201ENSMUST00000068992 Arhgef11Q68FM7 1552 aa11.91□□□□□ -0.5
Pcdh9-201ENSMUST00000068992 NexmifQ5DTT1 1515 aa11.9□□□□□ -0.5
Pcdh9-201ENSMUST00000068992 CntlnA2AM05 1397 aa11.9□□□□□ -0.5
Pcdh9-201ENSMUST00000068992 Mroh2aD3Z750 1679 aa11.9□□□□□ -0.5
Pcdh9-201ENSMUST00000068992 Lrriq1Q0P5X1 1673 aa11.9□□□□□ -0.5
Pcdh9-201ENSMUST00000068992 Asxl1P59598 1514 aa11.9□□□□□ -0.51
Pcdh9-201ENSMUST00000068992 Prdm2A2A7B5 1709 aaKnown RBP11.89□□□□□ -0.51
Pcdh9-201ENSMUST00000068992 CenpbP27790 599 aa11.89□□□□□ -0.51
Pcdh9-201ENSMUST00000068992 Polr1aO35134 1717 aaKnown RBP11.88□□□□□ -0.51
Pcdh9-201ENSMUST00000068992 Wdr66E9Q743 1299 aa11.88□□□□□ -0.51
Pcdh9-201ENSMUST00000068992 Esf1Q3V1V3 845 aaKnown RBP11.88□□□□□ -0.51
Pcdh9-201ENSMUST00000068992 Rprd2Q6NXI6 1469 aaKnown RBP11.88□□□□□ -0.51
Pcdh9-201ENSMUST00000068992 Ak9G3UYQ4 1894 aa11.88□□□□□ -0.51
Pcdh9-201ENSMUST00000068992 Carmil1Q6EDY6 1374 aa11.87□□□□□ -0.51
Pcdh9-201ENSMUST00000068992 Rfx7F8VPJ6 1459 aa11.87□□□□□ -0.51
Pcdh9-201ENSMUST00000068992 Kdm3bQ6ZPY7 1562 aa11.87□□□□□ -0.51
Pcdh9-201ENSMUST00000068992 Adcy10Q8C0T9 1614 aa11.87□□□□□ -0.51
Pcdh9-201ENSMUST00000068992 Setd1aE9PYH6 1716 aa11.86□□□□□ -0.51
Pcdh9-201ENSMUST00000068992 Kif15Q6P9L6 1387 aa11.85□□□□□ -0.51
Pcdh9-201ENSMUST00000068992 Hspa5P20029 655 aaKnown RBP11.85□□□□□ -0.51
Pcdh9-201ENSMUST00000068992 Fyco1Q8VDC1 1437 aa11.85□□□□□ -0.51
Pcdh9-201ENSMUST00000068992 Myom3A2ABU4 1439 aa11.85□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 49.5 ms