RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 SPART-AS1P0CW21 52 aa6.93□□□□□ -1.3
PHGDH-215ENST00000641371 UBE2D3P61077 147 aa6.93□□□□□ -1.3
PHGDH-215ENST00000641371 UBE2D2P62837 147 aa6.93□□□□□ -1.3
PHGDH-215ENST00000641371 PMVKQ15126 192 aa6.93□□□□□ -1.3
PHGDH-215ENST00000641371 ZNRF2Q8NHG8 242 aa6.93□□□□□ -1.3
PHGDH-215ENST00000641371 BAALCQ8WXS3 180 aa6.93□□□□□ -1.3
PHGDH-215ENST00000641371 IGLC3P0DOY3 106 aa6.92□□□□□ -1.3
PHGDH-215ENST00000641371 DEFA6Q01524 100 aa6.92□□□□□ -1.3
PHGDH-215ENST00000641371 Q6ZSN1 163 aa6.92□□□□□ -1.3
PHGDH-215ENST00000641371 NEGR1Q7Z3B1 354 aa6.92□□□□□ -1.3
PHGDH-215ENST00000641371 SH2D6Q7Z4S9 175 aa6.92□□□□□ -1.3
PHGDH-215ENST00000641371 SLC25A29Q8N8R3 303 aa6.92□□□□□ -1.3
PHGDH-215ENST00000641371 Q8NAQ8 132 aa6.92□□□□□ -1.3
PHGDH-215ENST00000641371 PRO1933Q9H354 126 aa6.92□□□□□ -1.3
PHGDH-215ENST00000641371 DKK2Q9UBU2 259 aa6.92□□□□□ -1.3
PHGDH-215ENST00000641371 PRO0255Q9UI72 69 aa6.92□□□□□ -1.3
PHGDH-215ENST00000641371 CHTOPQ9Y3Y2 248 aaKnown RBP6.92□□□□□ -1.3
PHGDH-215ENST00000641371 VWFP04275 2813 aa6.92□□□□□ -1.3
PHGDH-215ENST00000641371 IGHV4-28A0A0C4DH34 117 aa6.91□□□□□ -1.3
PHGDH-215ENST00000641371 P0DMU3 169 aa6.91□□□□□ -1.3
PHGDH-215ENST00000641371 FAM231AP0DMU4 169 aa6.91□□□□□ -1.3
PHGDH-215ENST00000641371 FAM231CP0DMU5 169 aa6.91□□□□□ -1.3
PHGDH-215ENST00000641371 EMP1P54849 157 aa6.91□□□□□ -1.3
PHGDH-215ENST00000641371 KRTAP10-11P60412 298 aa6.91□□□□□ -1.3
PHGDH-215ENST00000641371 HERVK_113P61574 105 aa6.91□□□□□ -1.3
PHGDH-215ENST00000641371 DAD1P61803 113 aa6.91□□□□□ -1.3
PHGDH-215ENST00000641371 MRPS36P82909 103 aaKnown RBP6.91□□□□□ -1.3
PHGDH-215ENST00000641371 FHL2Q14192 279 aa6.91□□□□□ -1.3
PHGDH-215ENST00000641371 LBHQ53QV2 105 aaPredicted RBP6.91□□□□□ -1.3
PHGDH-215ENST00000641371 FAM222AQ5U5X8 452 aa6.91□□□□□ -1.3
PHGDH-215ENST00000641371 ATOH7Q8N100 152 aa6.91□□□□□ -1.3
PHGDH-215ENST00000641371 C11orf68Q9H3H3 251 aaKnown RBP6.91□□□□□ -1.3
PHGDH-215ENST00000641371 HHLA3Q9XRX5 114 aa6.91□□□□□ -1.3
PHGDH-215ENST00000641371 CSDC2Q9Y534 153 aaKnown RBP6.91□□□□□ -1.3
PHGDH-215ENST00000641371 TRBV25-1A0A075B6N4 114 aa6.9□□□□□ -1.3
PHGDH-215ENST00000641371 DLEU1O43261 78 aa6.9□□□□□ -1.3
PHGDH-215ENST00000641371 ATP5G1P05496 136 aa6.9□□□□□ -1.3
PHGDH-215ENST00000641371 DEFB130BP0DP73 79 aa6.9□□□□□ -1.3
PHGDH-215ENST00000641371 DEFB130AP0DP74 79 aa6.9□□□□□ -1.3
PHGDH-215ENST00000641371 SLC25A34Q6PIV7 304 aa6.9□□□□□ -1.3
PHGDH-215ENST00000641371 MDFIQ99750 246 aa6.9□□□□□ -1.3
PHGDH-215ENST00000641371 C2orf88Q9BSF0 95 aa6.9□□□□□ -1.3
PHGDH-215ENST00000641371 VCX2Q9H322 139 aa6.9□□□□□ -1.3
PHGDH-215ENST00000641371 MRPL35Q9NZE8 188 aaKnown RBP6.9□□□□□ -1.3
PHGDH-215ENST00000641371 TRRAPQ9Y4A5 3859 aa6.89□□□□□ -1.31
PHGDH-215ENST00000641371 TRAV26-1A0A087WT03 109 aa6.89□□□□□ -1.31
PHGDH-215ENST00000641371 GAGE12JA6NER3 117 aa6.89□□□□□ -1.31
PHGDH-215ENST00000641371 PRSS29PA6NIE9 313 aa6.89□□□□□ -1.31
PHGDH-215ENST00000641371 COX8AP10176 69 aa6.89□□□□□ -1.31
PHGDH-215ENST00000641371 ZNF25P17030 456 aaPredicted RBP6.89□□□□□ -1.31
PHGDH-215ENST00000641371 HNRNPA3P51991 378 aaKnown RBP6.89□□□□□ -1.31
PHGDH-215ENST00000641371 SEC11AP67812 179 aa6.89□□□□□ -1.31
PHGDH-215ENST00000641371 GAGE1Q13065 139 aa6.89□□□□□ -1.31
PHGDH-215ENST00000641371 GAGE4Q13068 117 aa6.89□□□□□ -1.31
PHGDH-215ENST00000641371 GAGE5Q13069 117 aa6.89□□□□□ -1.31
PHGDH-215ENST00000641371 GAGE13Q4V321 117 aa6.89□□□□□ -1.31
PHGDH-215ENST00000641371 DGAT2L7PQ6IED9 249 aa6.89□□□□□ -1.31
PHGDH-215ENST00000641371 TMEM243Q9BU79 118 aa6.89□□□□□ -1.31
PHGDH-215ENST00000641371 CHCHD7Q9BUK0 85 aa6.89□□□□□ -1.31
PHGDH-215ENST00000641371 CST9LQ9H4G1 147 aa6.89□□□□□ -1.31
PHGDH-215ENST00000641371 MRPS16Q9Y3D3 137 aaKnown RBP6.89□□□□□ -1.31
PHGDH-215ENST00000641371 CMYA5Q8N3K9 4069 aa6.89□□□□□ -1.31
PHGDH-215ENST00000641371 STAB1Q9NY15 2570 aa6.88□□□□□ -1.31
PHGDH-215ENST00000641371 ANK2Q01484 3957 aa6.88□□□□□ -1.31
PHGDH-215ENST00000641371 hDV102S1A0JD36 115 aa6.88□□□□□ -1.31
PHGDH-215ENST00000641371 G3V4G9 280 aa6.88□□□□□ -1.31
PHGDH-215ENST00000641371 UBE2L6O14933 153 aa6.88□□□□□ -1.31
PHGDH-215ENST00000641371 SIVA1O15304 175 aa6.88□□□□□ -1.31
PHGDH-215ENST00000641371 LINC00694P0DN24 101 aa6.88□□□□□ -1.31
PHGDH-215ENST00000641371 RPL39P62891 51 aaKnown RBP6.88□□□□□ -1.31
PHGDH-215ENST00000641371 KPRPQ5T749 579 aaPredicted RBP6.88□□□□□ -1.31
PHGDH-215ENST00000641371 NFE4Q86UQ8 179 aa6.88□□□□□ -1.31
PHGDH-215ENST00000641371 AMELXQ99217 191 aa6.88□□□□□ -1.31
PHGDH-215ENST00000641371 UBE2D4Q9Y2X8 147 aa6.88□□□□□ -1.31
PHGDH-215ENST00000641371 IGLV4-3A0A075B6K6 122 aa6.87□□□□□ -1.31
PHGDH-215ENST00000641371 LINC00587B1AMM8 73 aa6.87□□□□□ -1.31
PHGDH-215ENST00000641371 H3BNG1 76 aa6.87□□□□□ -1.31
PHGDH-215ENST00000641371 PAX4O43316 350 aa6.87□□□□□ -1.31
PHGDH-215ENST00000641371 ZC2HC1BQ5TFG8 222 aa6.87□□□□□ -1.31
PHGDH-215ENST00000641371 PHLDA1Q8WV24 401 aaPredicted RBP6.87□□□□□ -1.31
PHGDH-215ENST00000641371 TMEM101Q96IK0 257 aa6.87□□□□□ -1.31
PHGDH-215ENST00000641371 COL6A5A8TX70 2615 aa6.87□□□□□ -1.31
PHGDH-215ENST00000641371 DNAH3Q8TD57 4116 aa6.87□□□□□ -1.31
PHGDH-215ENST00000641371 FBN1P35555 2871 aaKnown RBP6.87□□□□□ -1.31
PHGDH-215ENST00000641371 C11orf86A6NJI1 115 aa6.86□□□□□ -1.31
PHGDH-215ENST00000641371 M0R143 59 aa6.86□□□□□ -1.31
PHGDH-215ENST00000641371 ATP6V0E2Q8NHE4 81 aa6.86□□□□□ -1.31
PHGDH-215ENST00000641371 SPATA25Q9BR10 227 aa6.86□□□□□ -1.31
PHGDH-215ENST00000641371 TRBV6-8A0A0A6YYG3 113 aa6.85□□□□□ -1.31
PHGDH-215ENST00000641371 IGHV3-38A0A0C4DH36 116 aa6.85□□□□□ -1.31
PHGDH-215ENST00000641371 E9PLD3 99 aa6.85□□□□□ -1.31
PHGDH-215ENST00000641371 GYPEP15421 78 aa6.85□□□□□ -1.31
PHGDH-215ENST00000641371 MRPL23Q16540 153 aaKnown RBP6.85□□□□□ -1.31
PHGDH-215ENST00000641371 MAJINQ3KP22 176 aa6.85□□□□□ -1.31
PHGDH-215ENST00000641371 AMMECR1LQ6DCA0 310 aa6.85□□□□□ -1.31
PHGDH-215ENST00000641371 SBSPONQ8IVN8 264 aa6.85□□□□□ -1.31
PHGDH-215ENST00000641371 BOD1L2Q8IYS8 172 aa6.85□□□□□ -1.31
PHGDH-215ENST00000641371 OR5A1Q8NGJ0 315 aa6.85□□□□□ -1.31
PHGDH-215ENST00000641371 C14orf144Q96I85 54 aa6.85□□□□□ -1.31
PHGDH-215ENST00000641371 NBEAL1Q6ZS30 2694 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms