RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 ANAPC16Q96DE5 110 aa17.75■□□□□ 0.43
VEGFA-231ENST00000640499 RYR1P21817 5038 aa17.74■□□□□ 0.43
VEGFA-231ENST00000640499 A0A1B0GW15 77 aa17.74■□□□□ 0.43
VEGFA-231ENST00000640499 F8W036 122 aa17.74■□□□□ 0.43
VEGFA-231ENST00000640499 COTL1Q14019 142 aa17.74■□□□□ 0.43
VEGFA-231ENST00000640499 UBE2WQ96B02 151 aa17.74■□□□□ 0.43
VEGFA-231ENST00000640499 TMEM243Q9BU79 118 aa17.74■□□□□ 0.43
VEGFA-231ENST00000640499 POLR2KP53803 58 aaKnown RBP17.73■□□□□ 0.43
VEGFA-231ENST00000640499 TMEM70Q9BUB7 260 aa17.73■□□□□ 0.43
VEGFA-231ENST00000640499 HBBP68871 147 aa17.72■□□□□ 0.43
VEGFA-231ENST00000640499 WFDC2Q14508 124 aa17.72■□□□□ 0.43
VEGFA-231ENST00000640499 ELOBQ15370 118 aa17.72■□□□□ 0.43
VEGFA-231ENST00000640499 SEC11CQ9BY50 192 aa17.72■□□□□ 0.43
VEGFA-231ENST00000640499 PSCAO43653 123 aa17.71■□□□□ 0.43
VEGFA-231ENST00000640499 AMTP48728 403 aa17.71■□□□□ 0.43
VEGFA-231ENST00000640499 ST20Q9HBF5 79 aa17.71■□□□□ 0.43
VEGFA-231ENST00000640499 C16orf90A8MZG2 172 aa17.7■□□□□ 0.42
VEGFA-231ENST00000640499 ANGP03950 147 aaKnown RBP17.7■□□□□ 0.42
VEGFA-231ENST00000640499 PKIAP61925 76 aa17.7■□□□□ 0.42
VEGFA-231ENST00000640499 C10orf91Q5T1B1 145 aa17.7■□□□□ 0.42
VEGFA-231ENST00000640499 C20orf203Q8NBC4 194 aa17.7■□□□□ 0.42
VEGFA-231ENST00000640499 PRR34Q9NV39 138 aa17.7■□□□□ 0.42
VEGFA-231ENST00000640499 APOBP04114 4563 aaKnown RBP17.7■□□□□ 0.42
VEGFA-231ENST00000640499 IGLV4-60A0A075B6I1 120 aa17.69■□□□□ 0.42
VEGFA-231ENST00000640499 I3L3M4 83 aa17.69■□□□□ 0.42
VEGFA-231ENST00000640499 TSHBP01222 138 aa17.69■□□□□ 0.42
VEGFA-231ENST00000640499 TM2D2Q9BX73 214 aa17.69■□□□□ 0.42
VEGFA-231ENST00000640499 A0A1B0GUV1 79 aa17.68■□□□□ 0.42
VEGFA-231ENST00000640499 ATP5L2Q7Z4Y8 100 aa17.68■□□□□ 0.42
VEGFA-231ENST00000640499 TRBV27A0A0K0K1C4 114 aa17.67■□□□□ 0.42
VEGFA-231ENST00000640499 PMCHP20382 165 aa17.67■□□□□ 0.42
VEGFA-231ENST00000640499 LINC00269Q8N2A0 174 aa17.67■□□□□ 0.42
VEGFA-231ENST00000640499 IGKV2D-24A0A075B6R9 120 aa17.66■□□□□ 0.42
VEGFA-231ENST00000640499 S100A8P05109 93 aa17.66■□□□□ 0.42
VEGFA-231ENST00000640499 TMEM242Q9NWH2 141 aa17.66■□□□□ 0.42
VEGFA-231ENST00000640499 ESDP10768 282 aa17.65■□□□□ 0.42
VEGFA-231ENST00000640499 Q0VG73 95 aa17.65■□□□□ 0.42
VEGFA-231ENST00000640499 PGPEP1Q9NXJ5 209 aa17.65■□□□□ 0.42
VEGFA-231ENST00000640499 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.64■□□□□ 0.41
VEGFA-231ENST00000640499 IGKV2-29A2NJV5 120 aaPredicted RBP17.64■□□□□ 0.41
VEGFA-231ENST00000640499 EREGO14944 169 aa17.64■□□□□ 0.41
VEGFA-231ENST00000640499 SUMO2P61956 95 aaKnown RBP17.64■□□□□ 0.41
VEGFA-231ENST00000640499 KRTAP26-1Q6PEX3 210 aa17.64■□□□□ 0.41
VEGFA-231ENST00000640499 CLPSL2Q6UWE3 100 aa17.64■□□□□ 0.41
VEGFA-231ENST00000640499 TRBV24-1A0A075B6N3 115 aa17.63■□□□□ 0.41
VEGFA-231ENST00000640499 APCSP02743 223 aa17.63■□□□□ 0.41
VEGFA-231ENST00000640499 BAALCQ8WXS3 180 aa17.63■□□□□ 0.41
VEGFA-231ENST00000640499 CARHSP1Q9Y2V2 147 aaKnown RBP17.63■□□□□ 0.41
VEGFA-231ENST00000640499 HSPG2P98160 4391 aa17.62■□□□□ 0.41
VEGFA-231ENST00000640499 D6R8Y8 96 aa17.62■□□□□ 0.41
VEGFA-231ENST00000640499 PPP1R17O96001 155 aa17.62■□□□□ 0.41
VEGFA-231ENST00000640499 CKS2P33552 79 aa17.62■□□□□ 0.41
VEGFA-231ENST00000640499 Q8N814 137 aa17.62■□□□□ 0.41
VEGFA-231ENST00000640499 RMI2Q96E14 147 aa17.62■□□□□ 0.41
VEGFA-231ENST00000640499 IMMP2LQ96T52 175 aa17.62■□□□□ 0.41
VEGFA-231ENST00000640499 COX11Q9Y6N1 276 aa17.62■□□□□ 0.41
VEGFA-231ENST00000640499 VCYO14598 125 aa17.61■□□□□ 0.41
VEGFA-231ENST00000640499 UBE2L6O14933 153 aa17.61■□□□□ 0.41
VEGFA-231ENST00000640499 LECT2O14960 151 aa17.61■□□□□ 0.41
VEGFA-231ENST00000640499 CRPP02741 224 aa17.61■□□□□ 0.41
VEGFA-231ENST00000640499 CTDSP1Q9GZU7 261 aa17.61■□□□□ 0.41
VEGFA-231ENST00000640499 TNFRSF6BO95407 300 aa17.6■□□□□ 0.41
VEGFA-231ENST00000640499 REG3AQ06141 175 aa17.6■□□□□ 0.41
VEGFA-231ENST00000640499 MIAQ16674 131 aa17.6■□□□□ 0.41
VEGFA-231ENST00000640499 BTF3L4Q96K17 158 aa17.6■□□□□ 0.41
VEGFA-231ENST00000640499 NPYP01303 97 aa17.59■□□□□ 0.41
VEGFA-231ENST00000640499 C1orf43Q9BWL3 253 aa17.59■□□□□ 0.41
VEGFA-231ENST00000640499 C7orf77A4D0Y5 90 aa17.58■□□□□ 0.4
VEGFA-231ENST00000640499 H7C423 109 aa17.58■□□□□ 0.4
VEGFA-231ENST00000640499 FGF6P10767 208 aa17.58■□□□□ 0.4
VEGFA-231ENST00000640499 C20orf78Q9BR46 151 aa17.58■□□□□ 0.4
VEGFA-231ENST00000640499 CDPF1Q6NVV7 123 aa17.57■□□□□ 0.4
VEGFA-231ENST00000640499 DNAH8Q96JB1 4490 aa17.57■□□□□ 0.4
VEGFA-231ENST00000640499 RPL32P62910 135 aaKnown RBP17.56■□□□□ 0.4
VEGFA-231ENST00000640499 CLRN3Q8NCR9 226 aa17.56■□□□□ 0.4
VEGFA-231ENST00000640499 PPBPP02775 128 aa17.55■□□□□ 0.4
VEGFA-231ENST00000640499 TMEM136Q6ZRR5 245 aa17.55■□□□□ 0.4
VEGFA-231ENST00000640499 KRTAP10-1P60331 282 aa17.54■□□□□ 0.4
VEGFA-231ENST00000640499 ORMDL3Q8N138 153 aa17.54■□□□□ 0.4
VEGFA-231ENST00000640499 IGLV10-54A0A075B6I4 117 aa17.53■□□□□ 0.4
VEGFA-231ENST00000640499 PHOX2AO14813 284 aa17.53■□□□□ 0.4
VEGFA-231ENST00000640499 RNASEKQ6P5S7 137 aaKnown RBP17.53■□□□□ 0.4
VEGFA-231ENST00000640499 AMMECR1LQ6DCA0 310 aa17.52■□□□□ 0.4
VEGFA-231ENST00000640499 PRELID3AQ96N28 172 aa17.52■□□□□ 0.4
VEGFA-231ENST00000640499 SMIM2Q9BVW6 85 aa17.52■□□□□ 0.4
VEGFA-231ENST00000640499 KRTAP17-1Q9BYP8 105 aa17.52■□□□□ 0.4
VEGFA-231ENST00000640499 MRPL52Q86TS9 123 aaKnown RBP17.51■□□□□ 0.39
VEGFA-231ENST00000640499 NTN5Q8WTR8 489 aaPredicted RBP17.51■□□□□ 0.39
VEGFA-231ENST00000640499 KIR2DL4Q99706 377 aa17.51■□□□□ 0.39
VEGFA-231ENST00000640499 FCER1GP30273 86 aa17.5■□□□□ 0.39
VEGFA-231ENST00000640499 TRAV9-1A0A075B6T8 112 aa17.49■□□□□ 0.39
VEGFA-231ENST00000640499 IGLV5-52A0A0A0MRZ9 124 aa17.49■□□□□ 0.39
VEGFA-231ENST00000640499 TRAV8-4A0A0B4J246 113 aa17.49■□□□□ 0.39
VEGFA-231ENST00000640499 ZNF25P17030 456 aaPredicted RBP17.49■□□□□ 0.39
VEGFA-231ENST00000640499 RHEBQ15382 184 aa17.49■□□□□ 0.39
VEGFA-231ENST00000640499 PRSS47A8MTI9 375 aa17.48■□□□□ 0.39
VEGFA-231ENST00000640499 CDK2AP2O75956 126 aa17.48■□□□□ 0.39
VEGFA-231ENST00000640499 HLA-DQA1P01909 254 aa17.48■□□□□ 0.39
VEGFA-231ENST00000640499 RPS10P5Q9NQ39 176 aa17.48■□□□□ 0.39
VEGFA-231ENST00000640499 IGLV2-33A0A075B6J2 118 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms