RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 IGHV3-53P01767 116 aa15.55■□□□□ 0.08
CLN6-224ENST00000638076 NHP2Q9NX24 153 aaKnown RBP15.55■□□□□ 0.08
CLN6-224ENST00000638076 CMC4P56277 68 aaPredicted RBP15.54■□□□□ 0.08
CLN6-224ENST00000638076 WFDC10AQ9H1F0 79 aa15.54■□□□□ 0.08
CLN6-224ENST00000638076 K7ERJ3 54 aa15.54■□□□□ 0.08
CLN6-224ENST00000638076 IL17DQ8TAD2 202 aa15.54■□□□□ 0.08
CLN6-224ENST00000638076 TRBV7-3A0A075B6L6 115 aa15.53■□□□□ 0.08
CLN6-224ENST00000638076 COTL1Q14019 142 aa15.53■□□□□ 0.08
CLN6-224ENST00000638076 NFE4Q86UQ8 179 aa15.53■□□□□ 0.08
CLN6-224ENST00000638076 TRGV1A0A0A0MS02 117 aa15.52■□□□□ 0.08
CLN6-224ENST00000638076 LY6G6DO95868 133 aa15.52■□□□□ 0.08
CLN6-224ENST00000638076 VCX2Q9H322 139 aa15.52■□□□□ 0.08
CLN6-224ENST00000638076 GAGE10A6NGK3 116 aa15.52■□□□□ 0.07
CLN6-224ENST00000638076 SCGB1D4Q6XE38 83 aa15.52■□□□□ 0.07
CLN6-224ENST00000638076 HIVEP2P31629 2446 aa15.52■□□□□ 0.07
CLN6-224ENST00000638076 GCN1Q92616 2671 aaKnown RBP15.52■□□□□ 0.07
CLN6-224ENST00000638076 PLEKHB2Q96CS7 222 aa15.51■□□□□ 0.07
CLN6-224ENST00000638076 PYGO1Q9Y3Y4 419 aa15.51■□□□□ 0.07
CLN6-224ENST00000638076 GIG44P09565 113 aaPredicted RBP15.51■□□□□ 0.07
CLN6-224ENST00000638076 PHLDA1Q8WV24 401 aaPredicted RBP15.51■□□□□ 0.07
CLN6-224ENST00000638076 DNAJC30Q96LL9 226 aa15.51■□□□□ 0.07
CLN6-224ENST00000638076 CEMP1Q6PRD7 247 aaPredicted RBP15.5■□□□□ 0.07
CLN6-224ENST00000638076 C19orf73Q9NVV2 129 aa15.5■□□□□ 0.07
CLN6-224ENST00000638076 IGHV3-38A0A0C4DH36 116 aa15.5■□□□□ 0.07
CLN6-224ENST00000638076 TMEM263Q8WUH6 116 aaKnown RBP15.5■□□□□ 0.07
CLN6-224ENST00000638076 FAM110AQ9BQ89 295 aa15.5■□□□□ 0.07
CLN6-224ENST00000638076 CHCHD7Q9BUK0 85 aa15.5■□□□□ 0.07
CLN6-224ENST00000638076 A0A1W2PPM0 123 aa15.49■□□□□ 0.07
CLN6-224ENST00000638076 TSPEAR-AS2P59090 65 aa15.49■□□□□ 0.07
CLN6-224ENST00000638076 KRTAP10-3P60369 221 aa15.49■□□□□ 0.07
CLN6-224ENST00000638076 FAM104AQ969W3 186 aa15.49■□□□□ 0.07
CLN6-224ENST00000638076 RPL35AP18077 110 aaKnown RBP15.49■□□□□ 0.07
CLN6-224ENST00000638076 A0A0J9YXV3 536 aa15.48■□□□□ 0.07
CLN6-224ENST00000638076 SAMD5Q5TGI4 173 aa15.48■□□□□ 0.07
CLN6-224ENST00000638076 GTF2H5Q6ZYL4 71 aa15.48■□□□□ 0.07
CLN6-224ENST00000638076 Q6ZTI0 123 aa15.48■□□□□ 0.07
CLN6-224ENST00000638076 ZNF479Q96JC4 524 aa15.48■□□□□ 0.07
CLN6-224ENST00000638076 SETXQ7Z333 2677 aaKnown RBP15.47■□□□□ 0.07
CLN6-224ENST00000638076 AMELXQ99217 191 aa15.47■□□□□ 0.07
CLN6-224ENST00000638076 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.46■□□□□ 0.07
CLN6-224ENST00000638076 IGKV2-29A2NJV5 120 aaPredicted RBP15.46■□□□□ 0.07
CLN6-224ENST00000638076 K7EP34 96 aa15.46■□□□□ 0.07
CLN6-224ENST00000638076 ZNF22P17026 224 aaPredicted RBP15.46■□□□□ 0.07
CLN6-224ENST00000638076 HECTD1Q9ULT8 2610 aa15.46■□□□□ 0.07
CLN6-224ENST00000638076 TMEM223A0PJW6 202 aa15.46■□□□□ 0.07
CLN6-224ENST00000638076 C12orf74Q32Q52 190 aa15.46■□□□□ 0.07
CLN6-224ENST00000638076 J3QQQ9 107 aa15.45■□□□□ 0.06
CLN6-224ENST00000638076 RNASE13Q5GAN3 156 aaKnown RBP15.45■□□□□ 0.06
CLN6-224ENST00000638076 NDUFA11Q86Y39 141 aa15.45■□□□□ 0.06
CLN6-224ENST00000638076 UBE2D4Q9Y2X8 147 aa15.45■□□□□ 0.06
CLN6-224ENST00000638076 NOP10Q9NPE3 64 aaKnown RBP15.45■□□□□ 0.06
CLN6-224ENST00000638076 FABP2P12104 132 aa15.44■□□□□ 0.06
CLN6-224ENST00000638076 SRSF9Q13242 221 aaKnown RBP eCLIP15.44■□□□□ 0.06
CLN6-224ENST00000638076 SPCS1Q9Y6A9 102 aa15.44■□□□□ 0.06
CLN6-224ENST00000638076 A0A0J9YY99 117 aa15.44■□□□□ 0.06
CLN6-224ENST00000638076 GAGE12BA1L429 117 aa15.44■□□□□ 0.06
CLN6-224ENST00000638076 LGALS3P17931 250 aaKnown RBP15.44■□□□□ 0.06
CLN6-224ENST00000638076 CRYBA4P53673 196 aa15.44■□□□□ 0.06
CLN6-224ENST00000638076 SPANXA1Q9NS26 97 aa15.44■□□□□ 0.06
CLN6-224ENST00000638076 PF4P02776 101 aa15.43■□□□□ 0.06
CLN6-224ENST00000638076 JMJD1CQ15652 2540 aa15.43■□□□□ 0.06
CLN6-224ENST00000638076 IGHV3-64A0A075B6Q5 118 aa15.42■□□□□ 0.06
CLN6-224ENST00000638076 LEPROTO15243 131 aa15.42■□□□□ 0.06
CLN6-224ENST00000638076 TRAV4A0A0B4J268 109 aa15.42■□□□□ 0.06
CLN6-224ENST00000638076 MRPS36P82909 103 aaKnown RBP15.42■□□□□ 0.06
CLN6-224ENST00000638076 C16orf74Q96GX8 76 aa15.42■□□□□ 0.06
CLN6-224ENST00000638076 C1QTNF4Q9BXJ3 329 aa15.42■□□□□ 0.06
CLN6-224ENST00000638076 IGLL5B9A064 214 aa15.41■□□□□ 0.06
CLN6-224ENST00000638076 INAFM1C9JVW0 142 aa15.41■□□□□ 0.06
CLN6-224ENST00000638076 DAZ2Q13117 558 aaKnown RBP15.41■□□□□ 0.06
CLN6-224ENST00000638076 CSNK1G2-AS1Q8NCQ2 148 aa15.41■□□□□ 0.06
CLN6-224ENST00000638076 PLAC8L1A1L4L8 177 aa15.4■□□□□ 0.06
CLN6-224ENST00000638076 K7EQD1 137 aa15.4■□□□□ 0.06
CLN6-224ENST00000638076 OTOGQ6ZRI0 2925 aa15.4■□□□□ 0.06
CLN6-224ENST00000638076 A0A1B0GWB2 263 aa15.4■□□□□ 0.06
CLN6-224ENST00000638076 Q6ZUT4 128 aa15.39■□□□□ 0.05
CLN6-224ENST00000638076 LINC00482Q8N8I6 264 aa15.39■□□□□ 0.05
CLN6-224ENST00000638076 OR5A1Q8NGJ0 315 aa15.39■□□□□ 0.05
CLN6-224ENST00000638076 TRBV10-1A0A0K0K1A3 114 aa15.38■□□□□ 0.05
CLN6-224ENST00000638076 RPL36AP83881 106 aaKnown RBP15.38■□□□□ 0.05
CLN6-224ENST00000638076 SLC25A29Q8N8R3 303 aa15.38■□□□□ 0.05
CLN6-224ENST00000638076 RPL36ALQ969Q0 106 aaKnown RBP15.38■□□□□ 0.05
CLN6-224ENST00000638076 RNF151Q2KHN1 245 aa15.38■□□□□ 0.05
CLN6-224ENST00000638076 NOTCH3Q9UM47 2321 aa15.38■□□□□ 0.05
CLN6-224ENST00000638076 TMEM238LA0A1B0GVL6 79 aa15.37■□□□□ 0.05
CLN6-224ENST00000638076 A6NJY4 79 aa15.37■□□□□ 0.05
CLN6-224ENST00000638076 RRN3P1Q2M238 152 aa15.37■□□□□ 0.05
CLN6-224ENST00000638076 SPANXB1Q9NS25 103 aaPredicted RBP15.37■□□□□ 0.05
CLN6-224ENST00000638076 GAGE7O76087 117 aa15.37■□□□□ 0.05
CLN6-224ENST00000638076 GAGE12FP0CL80 117 aa15.37■□□□□ 0.05
CLN6-224ENST00000638076 GAGE12GP0CL81 117 aa15.37■□□□□ 0.05
CLN6-224ENST00000638076 GAGE12IP0CL82 117 aa15.37■□□□□ 0.05
CLN6-224ENST00000638076 NOTCH2Q04721 2471 aa15.37■□□□□ 0.05
CLN6-224ENST00000638076 TRGV2A0A075B6R0 118 aa15.35■□□□□ 0.05
CLN6-224ENST00000638076 TINCRA0A1B0GVN0 87 aa15.35■□□□□ 0.05
CLN6-224ENST00000638076 GAGE12JA6NER3 117 aa15.34■□□□□ 0.05
CLN6-224ENST00000638076 IGHV3-30P01768 117 aa15.34■□□□□ 0.05
CLN6-224ENST00000638076 IGHV3-30-5P0DP03 117 aa15.34■□□□□ 0.05
CLN6-224ENST00000638076 GAGE4Q13068 117 aa15.34■□□□□ 0.05
CLN6-224ENST00000638076 GAGE5Q13069 117 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms