RNA–Protein interactions for RNA: ENST00000635857.1

LIN28B-202, Transcript of lin-28 homolog B, humanhuman

TSL 5

Gene LIN28B, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-202ENST00000635857 RAB4AP20338 218 aa11.37□□□□□ -0.59
LIN28B-202ENST00000635857 KRTAP10-2P60368 255 aa11.37□□□□□ -0.59
LIN28B-202ENST00000635857 RBX1P62877 108 aa11.37□□□□□ -0.59
LIN28B-202ENST00000635857 HBBP68871 147 aa11.37□□□□□ -0.59
LIN28B-202ENST00000635857 MRPL54Q6P161 138 aaKnown RBP11.37□□□□□ -0.59
LIN28B-202ENST00000635857 TRBV6-5A0A0K0K1A5 114 aa11.36□□□□□ -0.59
LIN28B-202ENST00000635857 I3L3M4 83 aa11.36□□□□□ -0.59
LIN28B-202ENST00000635857 MIAQ16674 131 aa11.36□□□□□ -0.59
LIN28B-202ENST00000635857 DEFB104AQ8WTQ1 72 aa11.36□□□□□ -0.59
LIN28B-202ENST00000635857 PKHD1P08F94 4074 aa11.35□□□□□ -0.59
LIN28B-202ENST00000635857 AMMECR1LQ6DCA0 310 aa11.35□□□□□ -0.59
LIN28B-202ENST00000635857 RNF185Q96GF1 192 aa11.35□□□□□ -0.59
LIN28B-202ENST00000635857 LRCOL1A6NCL2 159 aa11.34□□□□□ -0.59
LIN28B-202ENST00000635857 FAM104BQ5XKR9 115 aa11.34□□□□□ -0.59
LIN28B-202ENST00000635857 ATP5L2Q7Z4Y8 100 aa11.34□□□□□ -0.59
LIN28B-202ENST00000635857 COMMD7Q86VX2 200 aa11.34□□□□□ -0.59
LIN28B-202ENST00000635857 NTN5Q8WTR8 489 aaPredicted RBP11.34□□□□□ -0.59
LIN28B-202ENST00000635857 IGLV5-52A0A0A0MRZ9 124 aa11.33□□□□□ -0.6
LIN28B-202ENST00000635857 A0A1B0GUV1 79 aa11.33□□□□□ -0.6
LIN28B-202ENST00000635857 CKS2P33552 79 aa11.33□□□□□ -0.6
LIN28B-202ENST00000635857 CLPSL2Q6UWE3 100 aa11.33□□□□□ -0.6
LIN28B-202ENST00000635857 LINC00269Q8N2A0 174 aa11.33□□□□□ -0.6
LIN28B-202ENST00000635857 Q8N814 137 aa11.33□□□□□ -0.6
LIN28B-202ENST00000635857 TMEM70Q9BUB7 260 aa11.33□□□□□ -0.6
LIN28B-202ENST00000635857 TMEM218A2RU14 115 aa11.32□□□□□ -0.6
LIN28B-202ENST00000635857 LINC00862A6NCI5 91 aa11.32□□□□□ -0.6
LIN28B-202ENST00000635857 SMKR1H3BMG3 65 aa11.32□□□□□ -0.6
LIN28B-202ENST00000635857 H7C423 109 aa11.32□□□□□ -0.6
LIN28B-202ENST00000635857 REG3AQ06141 175 aa11.32□□□□□ -0.6
LIN28B-202ENST00000635857 ENHOQ6UWT2 76 aa11.32□□□□□ -0.6
LIN28B-202ENST00000635857 BTF3L4Q96K17 158 aa11.32□□□□□ -0.6
LIN28B-202ENST00000635857 DNAH11Q96DT5 4516 aa11.32□□□□□ -0.6
LIN28B-202ENST00000635857 LECT2O14960 151 aa11.31□□□□□ -0.6
LIN28B-202ENST00000635857 HLA-DQA1P01909 254 aa11.31□□□□□ -0.6
LIN28B-202ENST00000635857 FCER1GP30273 86 aa11.31□□□□□ -0.6
LIN28B-202ENST00000635857 RPS10P46783 165 aaKnown RBP11.31□□□□□ -0.6
LIN28B-202ENST00000635857 MRPL51Q4U2R6 128 aaKnown RBP11.31□□□□□ -0.6
LIN28B-202ENST00000635857 RNASEKQ6P5S7 137 aaKnown RBP11.31□□□□□ -0.6
LIN28B-202ENST00000635857 BAALCQ8WXS3 180 aa11.31□□□□□ -0.6
LIN28B-202ENST00000635857 KIR2DL4Q99706 377 aa11.31□□□□□ -0.6
LIN28B-202ENST00000635857 VCYO14598 125 aa11.3□□□□□ -0.6
LIN28B-202ENST00000635857 GAS8-AS1O95177 125 aa11.3□□□□□ -0.6
LIN28B-202ENST00000635857 SUMO2P61956 95 aaKnown RBP11.3□□□□□ -0.6
LIN28B-202ENST00000635857 C14orf177Q52M58 125 aa11.3□□□□□ -0.6
LIN28B-202ENST00000635857 TMEM101Q96IK0 257 aa11.3□□□□□ -0.6
LIN28B-202ENST00000635857 PRR34Q9NV39 138 aa11.3□□□□□ -0.6
LIN28B-202ENST00000635857 TMEM242Q9NWH2 141 aa11.3□□□□□ -0.6
LIN28B-202ENST00000635857 DYNC1H1Q14204 4646 aaKnown RBP11.29□□□□□ -0.6
LIN28B-202ENST00000635857 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.29□□□□□ -0.6
LIN28B-202ENST00000635857 TRAV8-4A0A0B4J246 113 aa11.29□□□□□ -0.6
LIN28B-202ENST00000635857 TRBV27A0A0K0K1C4 114 aa11.29□□□□□ -0.6
LIN28B-202ENST00000635857 A0A1B0GXF2 115 aa11.29□□□□□ -0.6
LIN28B-202ENST00000635857 IGKV2-29A2NJV5 120 aaPredicted RBP11.29□□□□□ -0.6
LIN28B-202ENST00000635857 CDK2AP2O75956 126 aa11.29□□□□□ -0.6
LIN28B-202ENST00000635857 PPBPP02775 128 aa11.29□□□□□ -0.6
LIN28B-202ENST00000635857 SMAGPQ0VAQ4 97 aa11.29□□□□□ -0.6
LIN28B-202ENST00000635857 C20orf203Q8NBC4 194 aa11.29□□□□□ -0.6
LIN28B-202ENST00000635857 SEC11CQ9BY50 192 aa11.29□□□□□ -0.6
LIN28B-202ENST00000635857 IGLV4-60A0A075B6I1 120 aa11.28□□□□□ -0.6
LIN28B-202ENST00000635857 ZNF25P17030 456 aaPredicted RBP11.28□□□□□ -0.6
LIN28B-202ENST00000635857 GCSHP23434 173 aa11.28□□□□□ -0.6
LIN28B-202ENST00000635857 FUSP35637 526 aaKnown RBP eCLIP11.28□□□□□ -0.6
LIN28B-202ENST00000635857 POLR2KP53803 58 aaKnown RBP11.28□□□□□ -0.6
LIN28B-202ENST00000635857 KIAA1109Q2LD37 5005 aa11.27□□□□□ -0.6
LIN28B-202ENST00000635857 C7orf77A4D0Y5 90 aa11.27□□□□□ -0.61
LIN28B-202ENST00000635857 D6R8Y8 96 aa11.27□□□□□ -0.61
LIN28B-202ENST00000635857 TCAPO15273 167 aa11.27□□□□□ -0.61
LIN28B-202ENST00000635857 TSHBP01222 138 aa11.27□□□□□ -0.61
LIN28B-202ENST00000635857 FGF6P10767 208 aa11.27□□□□□ -0.61
LIN28B-202ENST00000635857 ADCYAP1P18509 176 aa11.27□□□□□ -0.61
LIN28B-202ENST00000635857 NRACQ8N912 160 aa11.27□□□□□ -0.61
LIN28B-202ENST00000635857 C20orf78Q9BR46 151 aa11.27□□□□□ -0.61
LIN28B-202ENST00000635857 CTDSP1Q9GZU7 261 aa11.27□□□□□ -0.61
LIN28B-202ENST00000635857 IGLV10-54A0A075B6I4 117 aa11.26□□□□□ -0.61
LIN28B-202ENST00000635857 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.26□□□□□ -0.61
LIN28B-202ENST00000635857 WFDC2Q14508 124 aa11.26□□□□□ -0.61
LIN28B-202ENST00000635857 ORMDL3Q8N138 153 aa11.26□□□□□ -0.61
LIN28B-202ENST00000635857 MAPKAPK5-AS1Q8N8E1 139 aa11.26□□□□□ -0.61
LIN28B-202ENST00000635857 TMEM18Q96B42 140 aa11.26□□□□□ -0.61
LIN28B-202ENST00000635857 IGKV3OR2-268A0A0C4DH90 116 aa11.25□□□□□ -0.61
LIN28B-202ENST00000635857 TNFRSF6BO95407 300 aa11.25□□□□□ -0.61
LIN28B-202ENST00000635857 S100PP25815 95 aa11.25□□□□□ -0.61
LIN28B-202ENST00000635857 DGAT2L7PQ6IED9 249 aa11.25□□□□□ -0.61
LIN28B-202ENST00000635857 OR5A1Q8NGJ0 315 aa11.25□□□□□ -0.61
LIN28B-202ENST00000635857 IMMP2LQ96T52 175 aa11.25□□□□□ -0.61
LIN28B-202ENST00000635857 TRBV24-1A0A075B6N3 115 aa11.24□□□□□ -0.61
LIN28B-202ENST00000635857 PHOX2AO14813 284 aa11.24□□□□□ -0.61
LIN28B-202ENST00000635857 ESDP10768 282 aa11.23□□□□□ -0.61
LIN28B-202ENST00000635857 TMEM136Q6ZRR5 245 aa11.23□□□□□ -0.61
LIN28B-202ENST00000635857 PRELID3AQ96N28 172 aa11.23□□□□□ -0.61
LIN28B-202ENST00000635857 SMIM2Q9BVW6 85 aa11.23□□□□□ -0.61
LIN28B-202ENST00000635857 USP17L23D6RBM5 183 aa11.22□□□□□ -0.61
LIN28B-202ENST00000635857 RPL32P62910 135 aaKnown RBP11.22□□□□□ -0.61
LIN28B-202ENST00000635857 TRAV9-1A0A075B6T8 112 aa11.21□□□□□ -0.61
LIN28B-202ENST00000635857 NPYP01303 97 aa11.21□□□□□ -0.61
LIN28B-202ENST00000635857 NDUFA5Q16718 116 aa11.21□□□□□ -0.61
LIN28B-202ENST00000635857 MRPL52Q86TS9 123 aaKnown RBP11.21□□□□□ -0.61
LIN28B-202ENST00000635857 LAMTOR2Q9Y2Q5 125 aa11.21□□□□□ -0.61
LIN28B-202ENST00000635857 HERC2O95714 4834 aa11.2□□□□□ -0.62
LIN28B-202ENST00000635857 RAB5AP20339 215 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 173.3 ms