RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 GAGE12IP0CL82 117 aa3.33□□□□□ -1.88
SCN1A-210ENST00000635776 IGHV3-30-3P0DP02 117 aa3.33□□□□□ -1.88
SCN1A-210ENST00000635776 PHLDA1Q8WV24 401 aaPredicted RBP3.33□□□□□ -1.88
SCN1A-210ENST00000635776 ATP5G1P05496 136 aa3.33□□□□□ -1.88
SCN1A-210ENST00000635776 SCGB1A1P11684 91 aa3.33□□□□□ -1.88
SCN1A-210ENST00000635776 RPL35AP18077 110 aaKnown RBP3.33□□□□□ -1.88
SCN1A-210ENST00000635776 NOP10Q9NPE3 64 aaKnown RBP3.33□□□□□ -1.88
SCN1A-210ENST00000635776 PPDPFQ9H3Y8 114 aa3.33□□□□□ -1.88
SCN1A-210ENST00000635776 UBE2D4Q9Y2X8 147 aa3.33□□□□□ -1.88
SCN1A-210ENST00000635776 GAS8-AS1O95177 125 aa3.32□□□□□ -1.88
SCN1A-210ENST00000635776 DNAL4O96015 105 aa3.32□□□□□ -1.88
SCN1A-210ENST00000635776 CRPP02741 224 aa3.32□□□□□ -1.88
SCN1A-210ENST00000635776 SPANXCQ9NY87 97 aa3.32□□□□□ -1.88
SCN1A-210ENST00000635776 NAV2Q8IVL1 2488 aa3.32□□□□□ -1.88
SCN1A-210ENST00000635776 UBE2D3P61077 147 aa3.32□□□□□ -1.88
SCN1A-210ENST00000635776 UBE2D2P62837 147 aa3.32□□□□□ -1.88
SCN1A-210ENST00000635776 P0DMU3 169 aa3.32□□□□□ -1.88
SCN1A-210ENST00000635776 FAM231AP0DMU4 169 aa3.32□□□□□ -1.88
SCN1A-210ENST00000635776 FAM231CP0DMU5 169 aa3.32□□□□□ -1.88
SCN1A-210ENST00000635776 DAD1P61803 113 aa3.32□□□□□ -1.88
SCN1A-210ENST00000635776 TRAV13-1A0A0B4J241 112 aa3.32□□□□□ -1.88
SCN1A-210ENST00000635776 MIAQ16674 131 aa3.32□□□□□ -1.88
SCN1A-210ENST00000635776 CARD19Q96LW7 228 aa3.32□□□□□ -1.88
SCN1A-210ENST00000635776 SIGMAR1Q99720 223 aa3.32□□□□□ -1.88
SCN1A-210ENST00000635776 IGLV4-69A0A075B6H9 119 aa3.32□□□□□ -1.88
SCN1A-210ENST00000635776 MIFP14174 115 aa3.32□□□□□ -1.88
SCN1A-210ENST00000635776 MRPL23Q16540 153 aaKnown RBP3.32□□□□□ -1.88
SCN1A-210ENST00000635776 C11orf72Q8NBR9 251 aa3.32□□□□□ -1.88
SCN1A-210ENST00000635776 SONP18583 2426 aaKnown RBP3.32□□□□□ -1.88
SCN1A-210ENST00000635776 H3BT86 120 aa3.32□□□□□ -1.88
SCN1A-210ENST00000635776 NDUFA1O15239 70 aa3.32□□□□□ -1.88
SCN1A-210ENST00000635776 SPART-AS1P0CW21 52 aa3.32□□□□□ -1.88
SCN1A-210ENST00000635776 UBE2D1P51668 147 aa3.32□□□□□ -1.88
SCN1A-210ENST00000635776 EMP1P54849 157 aa3.32□□□□□ -1.88
SCN1A-210ENST00000635776 PROK1P58294 105 aa3.32□□□□□ -1.88
SCN1A-210ENST00000635776 C6orf226Q5I0X4 101 aa3.32□□□□□ -1.88
SCN1A-210ENST00000635776 LINC01561Q8N1V8 128 aa3.32□□□□□ -1.88
SCN1A-210ENST00000635776 SELENOKQ9Y6D0 94 aa3.32□□□□□ -1.88
SCN1A-210ENST00000635776 FAM222AQ5U5X8 452 aa3.31□□□□□ -1.88
SCN1A-210ENST00000635776 PAX4O43316 350 aa3.31□□□□□ -1.88
SCN1A-210ENST00000635776 H0YGX0 51 aa3.31□□□□□ -1.88
SCN1A-210ENST00000635776 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.31□□□□□ -1.88
SCN1A-210ENST00000635776 IGKV2-29A2NJV5 120 aaPredicted RBP3.31□□□□□ -1.88
SCN1A-210ENST00000635776 A4D1N5 150 aa3.31□□□□□ -1.88
SCN1A-210ENST00000635776 M0QXV9 152 aa3.31□□□□□ -1.88
SCN1A-210ENST00000635776 INAFM2P0DMQ5 153 aa3.31□□□□□ -1.88
SCN1A-210ENST00000635776 MAPKAPK5-AS1Q8N8E1 139 aa3.31□□□□□ -1.88
SCN1A-210ENST00000635776 SPRY2O43597 315 aa3.31□□□□□ -1.88
SCN1A-210ENST00000635776 H3BQ85 93 aa3.31□□□□□ -1.88
SCN1A-210ENST00000635776 DEFB130BP0DP73 79 aa3.31□□□□□ -1.88
SCN1A-210ENST00000635776 DEFB130AP0DP74 79 aa3.31□□□□□ -1.88
SCN1A-210ENST00000635776 C1orf158Q8N1D5 194 aa3.31□□□□□ -1.88
SCN1A-210ENST00000635776 TTTY13Q9BZ97 58 aa3.31□□□□□ -1.88
SCN1A-210ENST00000635776 MALP21145 153 aa3.31□□□□□ -1.88
SCN1A-210ENST00000635776 Q6ZTI0 123 aa3.31□□□□□ -1.88
SCN1A-210ENST00000635776 TEN1Q86WV5 123 aa3.31□□□□□ -1.88
SCN1A-210ENST00000635776 MUSTN1Q8IVN3 82 aa3.31□□□□□ -1.88
SCN1A-210ENST00000635776 TRBV30A0A0K0K1B3 111 aa3.31□□□□□ -1.88
SCN1A-210ENST00000635776 IGHV3-30P01768 117 aa3.31□□□□□ -1.88
SCN1A-210ENST00000635776 ACYP1P07311 99 aa3.31□□□□□ -1.88
SCN1A-210ENST00000635776 IGHV3-30-5P0DP03 117 aa3.31□□□□□ -1.88
SCN1A-210ENST00000635776 CKS1BP61024 79 aa3.3□□□□□ -1.88
SCN1A-210ENST00000635776 CHCHD7Q9BUK0 85 aa3.3□□□□□ -1.88
SCN1A-210ENST00000635776 H7C2G1 150 aa3.3□□□□□ -1.88
SCN1A-210ENST00000635776 Q9H8V8 135 aa3.3□□□□□ -1.88
SCN1A-210ENST00000635776 IGLV5-45A0A087WSX0 123 aa3.3□□□□□ -1.88
SCN1A-210ENST00000635776 IGHV3-38A0A0C4DH36 116 aa3.3□□□□□ -1.88
SCN1A-210ENST00000635776 TOMM7Q9P0U1 55 aa3.3□□□□□ -1.88
SCN1A-210ENST00000635776 IGHV3-64A0A075B6Q5 118 aa3.3□□□□□ -1.88
SCN1A-210ENST00000635776 LINC00158P58513 81 aa3.3□□□□□ -1.88
SCN1A-210ENST00000635776 FAM19A3Q7Z5A8 133 aa3.3□□□□□ -1.88
SCN1A-210ENST00000635776 COX7B2Q8TF08 81 aa3.3□□□□□ -1.88
SCN1A-210ENST00000635776 Q6ZQT7 251 aa3.3□□□□□ -1.88
SCN1A-210ENST00000635776 TRBV6-8A0A0A6YYG3 113 aa3.3□□□□□ -1.88
SCN1A-210ENST00000635776 SLC25A20O43772 301 aa3.3□□□□□ -1.88
SCN1A-210ENST00000635776 Q6ZUT4 128 aa3.3□□□□□ -1.88
SCN1A-210ENST00000635776 K7ERJ3 54 aa3.3□□□□□ -1.88
SCN1A-210ENST00000635776 ZNF575Q86XF7 245 aa3.3□□□□□ -1.88
SCN1A-210ENST00000635776 IBA57-AS1B1ANH7 110 aa3.29□□□□□ -1.88
SCN1A-210ENST00000635776 SPINK8P0C7L1 97 aa3.29□□□□□ -1.88
SCN1A-210ENST00000635776 C2orf82Q6UX34 121 aa3.29□□□□□ -1.88
SCN1A-210ENST00000635776 NAA38Q9BRA0 125 aaKnown RBP3.29□□□□□ -1.88
SCN1A-210ENST00000635776 ICOSQ9Y6W8 199 aa3.29□□□□□ -1.88
SCN1A-210ENST00000635776 ETDBQ3ZM63 59 aa3.29□□□□□ -1.88
SCN1A-210ENST00000635776 TSPAN13O95857 204 aa3.29□□□□□ -1.88
SCN1A-210ENST00000635776 EDN2P20800 178 aa3.29□□□□□ -1.88
SCN1A-210ENST00000635776 C18orf65Q6ZTR6 163 aa3.29□□□□□ -1.88
SCN1A-210ENST00000635776 LINC00482Q8N8I6 264 aa3.29□□□□□ -1.88
SCN1A-210ENST00000635776 CDC42SE2Q9NRR3 84 aa3.29□□□□□ -1.88
SCN1A-210ENST00000635776 GAGE6Q13070 117 aa3.29□□□□□ -1.88
SCN1A-210ENST00000635776 S100A7L2Q5SY68 101 aa3.29□□□□□ -1.88
SCN1A-210ENST00000635776 PKD1L2Q7Z442 2459 aa3.29□□□□□ -1.88
SCN1A-210ENST00000635776 G3V4G9 280 aa3.29□□□□□ -1.88
SCN1A-210ENST00000635776 LINC01620Q4KN68 170 aa3.29□□□□□ -1.88
SCN1A-210ENST00000635776 CSPG4Q6UVK1 2322 aa3.29□□□□□ -1.88
SCN1A-210ENST00000635776 TRBV10-2A0A0K0K1G8 114 aa3.29□□□□□ -1.88
SCN1A-210ENST00000635776 IL17DQ8TAD2 202 aa3.29□□□□□ -1.88
SCN1A-210ENST00000635776 LY6G6DO95868 133 aa3.28□□□□□ -1.88
SCN1A-210ENST00000635776 TTC32Q5I0X7 151 aa3.28□□□□□ -1.88
SCN1A-210ENST00000635776 A0A1B0GUV1 79 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms