RNA–Protein interactions for RNA: ENST00000633552.1

GPCPD1-207, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-207ENST00000633552 TTC9CQ8N5M4 171 aa0.41□□□□□ -2.34
GPCPD1-207ENST00000633552 PP6455Q8WZ26 134 aa0.41□□□□□ -2.34
GPCPD1-207ENST00000633552 PPP3R2Q96LZ3 170 aa0.41□□□□□ -2.34
GPCPD1-207ENST00000633552 CELSR2Q9HCU4 2923 aa0.41□□□□□ -2.34
GPCPD1-207ENST00000633552 CDK13Q14004 1512 aaKnown RBP0.41□□□□□ -2.34
GPCPD1-207ENST00000633552 PTPRQQ9UMZ3 2332 aa0.41□□□□□ -2.34
GPCPD1-207ENST00000633552 UNC79Q9P2D8 2635 aa0.4□□□□□ -2.34
GPCPD1-207ENST00000633552 CASKIN1Q8WXD9 1431 aa0.4□□□□□ -2.34
GPCPD1-207ENST00000633552 DOCK1Q14185 1865 aa0.4□□□□□ -2.35
GPCPD1-207ENST00000633552 AKAP6Q13023 2319 aa0.4□□□□□ -2.35
GPCPD1-207ENST00000633552 PROK2Q9HC23 129 aa0.4□□□□□ -2.35
GPCPD1-207ENST00000633552 DOPEY2Q9Y3R5 2298 aa0.4□□□□□ -2.35
GPCPD1-207ENST00000633552 ARAP2Q8WZ64 1704 aa0.39□□□□□ -2.35
GPCPD1-207ENST00000633552 NWD2Q9ULI1 1742 aa0.39□□□□□ -2.35
GPCPD1-207ENST00000633552 PATJQ8NI35 1801 aa0.39□□□□□ -2.35
GPCPD1-207ENST00000633552 MRPL54Q6P161 138 aaKnown RBP0.39□□□□□ -2.35
GPCPD1-207ENST00000633552 NPVFQ9HCQ7 196 aa0.39□□□□□ -2.35
GPCPD1-207ENST00000633552 R4GMQ9 66 aa0.39□□□□□ -2.35
GPCPD1-207ENST00000633552 MBD5Q9P267 1494 aa0.39□□□□□ -2.35
GPCPD1-207ENST00000633552 MDN1Q9NU22 5596 aa0.39□□□□□ -2.35
GPCPD1-207ENST00000633552 DOCK2Q92608 1830 aa0.38□□□□□ -2.35
GPCPD1-207ENST00000633552 MAST4O15021 2626 aa0.38□□□□□ -2.35
GPCPD1-207ENST00000633552 SSC5DA1L4H1 1573 aa0.38□□□□□ -2.35
GPCPD1-207ENST00000633552 OOSP1A8MZH6 123 aa0.38□□□□□ -2.35
GPCPD1-207ENST00000633552 COX6A2Q02221 97 aa0.38□□□□□ -2.35
GPCPD1-207ENST00000633552 SPAG11BQ08648 103 aa0.38□□□□□ -2.35
GPCPD1-207ENST00000633552 SPAG11AQ6PDA7 123 aa0.38□□□□□ -2.35
GPCPD1-207ENST00000633552 C8orf59Q8N0T1 100 aaPredicted RBP0.38□□□□□ -2.35
GPCPD1-207ENST00000633552 GNG8Q9UK08 70 aa0.38□□□□□ -2.35
GPCPD1-207ENST00000633552 KDM6BO15054 1643 aa0.38□□□□□ -2.35
GPCPD1-207ENST00000633552 ZMYM4Q5VZL5 1548 aa0.38□□□□□ -2.35
GPCPD1-207ENST00000633552 SPTBN1Q01082 2364 aaKnown RBP0.38□□□□□ -2.35
GPCPD1-207ENST00000633552 LINC00587B1AMM8 73 aa0.37□□□□□ -2.35
GPCPD1-207ENST00000633552 F6UZH7 168 aa0.37□□□□□ -2.35
GPCPD1-207ENST00000633552 M0R135 149 aa0.37□□□□□ -2.35
GPCPD1-207ENST00000633552 S100A1P23297 94 aa0.37□□□□□ -2.35
GPCPD1-207ENST00000633552 CCL18P55774 89 aa0.37□□□□□ -2.35
GPCPD1-207ENST00000633552 TPPP2P59282 170 aa0.37□□□□□ -2.35
GPCPD1-207ENST00000633552 C9orf153Q5TBE3 101 aa0.37□□□□□ -2.35
GPCPD1-207ENST00000633552 CFAP126Q5VTH2 177 aa0.37□□□□□ -2.35
GPCPD1-207ENST00000633552 UBE2DNLQ8IWF7 75 aa0.37□□□□□ -2.35
GPCPD1-207ENST00000633552 TSLPQ969D9 159 aa0.37□□□□□ -2.35
GPCPD1-207ENST00000633552 SPANXDQ9BXN6 97 aa0.37□□□□□ -2.35
GPCPD1-207ENST00000633552 PKDREJQ9NTG1 2253 aa0.36□□□□□ -2.35
GPCPD1-207ENST00000633552 DMBT1Q9UGM3 2413 aaPredicted RBP0.36□□□□□ -2.35
GPCPD1-207ENST00000633552 KTN1Q86UP2 1357 aaKnown RBP0.36□□□□□ -2.35
GPCPD1-207ENST00000633552 CTXND1A0A1B0GTU2 59 aa0.36□□□□□ -2.35
GPCPD1-207ENST00000633552 G3V318 75 aa0.36□□□□□ -2.35
GPCPD1-207ENST00000633552 CORTO00230 105 aa0.36□□□□□ -2.35
GPCPD1-207ENST00000633552 SSBP3-AS1Q7Z2R9 100 aa0.36□□□□□ -2.35
GPCPD1-207ENST00000633552 C2orf88Q9BSF0 95 aa0.36□□□□□ -2.35
GPCPD1-207ENST00000633552 V9GYH0 126 aa0.36□□□□□ -2.35
GPCPD1-207ENST00000633552 PPIP5K1Q6PFW1 1433 aa0.36□□□□□ -2.35
GPCPD1-207ENST00000633552 GOLGA3Q08378 1498 aa0.35□□□□□ -2.35
GPCPD1-207ENST00000633552 NCOR2Q9Y618 2525 aa0.35□□□□□ -2.35
GPCPD1-207ENST00000633552 ZNF815PA8K554 130 aa0.35□□□□□ -2.35
GPCPD1-207ENST00000633552 SSSCA1O60232 199 aa0.35□□□□□ -2.35
GPCPD1-207ENST00000633552 TNFP01375 233 aa0.35□□□□□ -2.35
GPCPD1-207ENST00000633552 Q5VV11 94 aa0.35□□□□□ -2.35
GPCPD1-207ENST00000633552 C5orf38Q86SI9 138 aa0.35□□□□□ -2.35
GPCPD1-207ENST00000633552 MYOZ3Q8TDC0 251 aa0.35□□□□□ -2.35
GPCPD1-207ENST00000633552 CYP4F30PQ9H0H9 118 aa0.35□□□□□ -2.35
GPCPD1-207ENST00000633552 LENEPQ9Y5L5 61 aa0.35□□□□□ -2.35
GPCPD1-207ENST00000633552 PSME4Q14997 1843 aa0.35□□□□□ -2.35
GPCPD1-207ENST00000633552 KMT2DO14686 5537 aa0.35□□□□□ -2.35
GPCPD1-207ENST00000633552 LRRC37A3O60309 1634 aa0.35□□□□□ -2.35
GPCPD1-207ENST00000633552 SIPA1L3O60292 1781 aaPredicted RBP0.34□□□□□ -2.35
GPCPD1-207ENST00000633552 TCHHQ07283 1943 aa0.34□□□□□ -2.35
GPCPD1-207ENST00000633552 USF3Q68DE3 2245 aa0.34□□□□□ -2.35
GPCPD1-207ENST00000633552 TRBV7-3A0A075B6L6 115 aa0.34□□□□□ -2.36
GPCPD1-207ENST00000633552 GNG4P50150 75 aa0.34□□□□□ -2.36
GPCPD1-207ENST00000633552 PPP3R1P63098 170 aa0.34□□□□□ -2.36
GPCPD1-207ENST00000633552 CPSF1Q10570 1443 aaKnown RBP0.34□□□□□ -2.36
GPCPD1-207ENST00000633552 PRDM2Q13029 1718 aa0.34□□□□□ -2.36
GPCPD1-207ENST00000633552 COMMD6Q7Z4G1 85 aa0.34□□□□□ -2.36
GPCPD1-207ENST00000633552 SVBPQ8N300 66 aa0.34□□□□□ -2.36
GPCPD1-207ENST00000633552 SMIM4Q8WVI0 70 aa0.34□□□□□ -2.36
GPCPD1-207ENST00000633552 TMEM203Q969S6 136 aa0.34□□□□□ -2.36
GPCPD1-207ENST00000633552 LINC00474Q9P2X8 69 aa0.34□□□□□ -2.36
GPCPD1-207ENST00000633552 IFT172Q9UG01 1749 aa0.34□□□□□ -2.36
GPCPD1-207ENST00000633552 IER3IP1Q9Y5U9 82 aa0.34□□□□□ -2.36
GPCPD1-207ENST00000633552 LAMC3Q9Y6N6 1575 aa0.34□□□□□ -2.36
GPCPD1-207ENST00000633552 CELSR1Q9NYQ6 3014 aa0.34□□□□□ -2.36
GPCPD1-207ENST00000633552 MRC1P22897 1456 aa0.34□□□□□ -2.36
GPCPD1-207ENST00000633552 MYO7BQ6PIF6 2116 aa0.34□□□□□ -2.36
GPCPD1-207ENST00000633552 NALCNQ8IZF0 1738 aa0.33□□□□□ -2.36
GPCPD1-207ENST00000633552 GVINP1Q7Z2Y8 2422 aa0.33□□□□□ -2.36
GPCPD1-207ENST00000633552 FAM24AA6NFZ4 105 aa0.33□□□□□ -2.36
GPCPD1-207ENST00000633552 PIN1P1O15428 100 aa0.33□□□□□ -2.36
GPCPD1-207ENST00000633552 HAMPP81172 84 aa0.33□□□□□ -2.36
GPCPD1-207ENST00000633552 MRPS10P82664 201 aaKnown RBP0.33□□□□□ -2.36
GPCPD1-207ENST00000633552 MGST2Q99735 147 aa0.33□□□□□ -2.36
GPCPD1-207ENST00000633552 DYNLRB1Q9NP97 96 aa0.33□□□□□ -2.36
GPCPD1-207ENST00000633552 PIEZO2Q9H5I5 2752 aa0.33□□□□□ -2.36
GPCPD1-207ENST00000633552 SMG6Q86US8 1419 aaKnown RBP0.32□□□□□ -2.36
GPCPD1-207ENST00000633552 ZNF236Q9UL36 1845 aa0.32□□□□□ -2.36
GPCPD1-207ENST00000633552 NCOR1O75376 2440 aa0.32□□□□□ -2.36
GPCPD1-207ENST00000633552 UBE2L5PA0A1B0GUS4 154 aa0.32□□□□□ -2.36
GPCPD1-207ENST00000633552 F8VRH5 84 aa0.32□□□□□ -2.36
GPCPD1-207ENST00000633552 UBE2L3P68036 154 aaKnown RBP0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms