RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 HIGD1AQ9Y241 93 aa-0.9□□□□□ -2.55
SRP54-214ENST00000630962 LINC00312Q9Y6C7 94 aa-0.9□□□□□ -2.55
SRP54-214ENST00000630962 SYNJ1O43426 1573 aa-0.91□□□□□ -2.55
SRP54-214ENST00000630962 TRBV20-1A0A075B6N2 111 aa-0.91□□□□□ -2.56
SRP54-214ENST00000630962 CTXND1A0A1B0GTU2 59 aa-0.91□□□□□ -2.56
SRP54-214ENST00000630962 H0YJX3 145 aa-0.91□□□□□ -2.56
SRP54-214ENST00000630962 SPINK4O60575 86 aa-0.91□□□□□ -2.56
SRP54-214ENST00000630962 NCS1P62166 190 aa-0.91□□□□□ -2.56
SRP54-214ENST00000630962 TFAMQ00059 246 aaKnown RBP-0.91□□□□□ -2.56
SRP54-214ENST00000630962 S100A7L2Q5SY68 101 aa-0.91□□□□□ -2.56
SRP54-214ENST00000630962 SMIM4Q8WVI0 70 aa-0.91□□□□□ -2.56
SRP54-214ENST00000630962 SKA2Q8WVK7 121 aaPredicted RBP-0.91□□□□□ -2.56
SRP54-214ENST00000630962 LRRC37A3O60309 1634 aa-0.92□□□□□ -2.56
SRP54-214ENST00000630962 PAPPAQ13219 1627 aa-0.92□□□□□ -2.56
SRP54-214ENST00000630962 PPP1R17O96001 155 aa-0.92□□□□□ -2.56
SRP54-214ENST00000630962 MT4P47944 62 aa-0.92□□□□□ -2.56
SRP54-214ENST00000630962 CCL18P55774 89 aa-0.92□□□□□ -2.56
SRP54-214ENST00000630962 RPS28P62857 69 aaKnown RBP-0.92□□□□□ -2.56
SRP54-214ENST00000630962 KRTAP6-2Q3LI66 62 aa-0.92□□□□□ -2.56
SRP54-214ENST00000630962 SDF2Q99470 211 aa-0.92□□□□□ -2.56
SRP54-214ENST00000630962 R4GMQ9 66 aa-0.92□□□□□ -2.56
SRP54-214ENST00000630962 IQSEC2Q5JU85 1478 aa-0.92□□□□□ -2.56
SRP54-214ENST00000630962 PCNX1Q96RV3 2341 aa-0.93□□□□□ -2.56
SRP54-214ENST00000630962 MYH13Q9UKX3 1938 aa-0.93□□□□□ -2.56
SRP54-214ENST00000630962 M0R135 149 aa-0.93□□□□□ -2.56
SRP54-214ENST00000630962 TNFP01375 233 aa-0.93□□□□□ -2.56
SRP54-214ENST00000630962 IL5P05113 134 aa-0.93□□□□□ -2.56
SRP54-214ENST00000630962 SCTP09683 121 aa-0.93□□□□□ -2.56
SRP54-214ENST00000630962 SPRR2AP35326 72 aa-0.93□□□□□ -2.56
SRP54-214ENST00000630962 ZNF818PQ6ZRF7 136 aa-0.93□□□□□ -2.56
SRP54-214ENST00000630962 SAR1AQ9NR31 198 aa-0.93□□□□□ -2.56
SRP54-214ENST00000630962 V9GYQ6 96 aa-0.93□□□□□ -2.56
SRP54-214ENST00000630962 HIVEP1P15822 2718 aa-0.93□□□□□ -2.56
SRP54-214ENST00000630962 DNAJC13O75165 2243 aa-0.93□□□□□ -2.56
SRP54-214ENST00000630962 PBRM1Q86U86 1689 aa-0.94□□□□□ -2.56
SRP54-214ENST00000630962 ARHGEF10O15013 1369 aa-0.94□□□□□ -2.56
SRP54-214ENST00000630962 A0A1B0GX51 115 aa-0.94□□□□□ -2.56
SRP54-214ENST00000630962 TSTD3H0UI37 97 aa-0.94□□□□□ -2.56
SRP54-214ENST00000630962 SNCGO76070 127 aa-0.94□□□□□ -2.56
SRP54-214ENST00000630962 FABP1P07148 127 aa-0.94□□□□□ -2.56
SRP54-214ENST00000630962 PIPP12273 146 aaPredicted RBP-0.94□□□□□ -2.56
SRP54-214ENST00000630962 KLK9Q2XQG4 91 aa-0.94□□□□□ -2.56
SRP54-214ENST00000630962 TMEM170BQ5T4T1 132 aa-0.94□□□□□ -2.56
SRP54-214ENST00000630962 Q6JHZ5 121 aa-0.94□□□□□ -2.56
SRP54-214ENST00000630962 PSMG3Q9BT73 122 aaPredicted RBP-0.94□□□□□ -2.56
SRP54-214ENST00000630962 SMPXQ9UHP9 88 aa-0.94□□□□□ -2.56
SRP54-214ENST00000630962 MYH8P13535 1937 aa-0.94□□□□□ -2.56
SRP54-214ENST00000630962 LRRC37A2A6NM11 1700 aa-0.95□□□□□ -2.56
SRP54-214ENST00000630962 PRDM2Q13029 1718 aa-0.95□□□□□ -2.56
SRP54-214ENST00000630962 DAPK1P53355 1430 aa-0.95□□□□□ -2.56
SRP54-214ENST00000630962 CASKIN1Q8WXD9 1431 aa-0.95□□□□□ -2.56
SRP54-214ENST00000630962 FAM236AA0A1B0GUQ0 79 aa-0.95□□□□□ -2.56
SRP54-214ENST00000630962 FAM236BA0A1B0GV22 79 aa-0.95□□□□□ -2.56
SRP54-214ENST00000630962 CBLN1P23435 193 aa-0.95□□□□□ -2.56
SRP54-214ENST00000630962 MMGT1Q8N4V1 131 aa-0.95□□□□□ -2.56
SRP54-214ENST00000630962 SEC11CQ9BY50 192 aa-0.95□□□□□ -2.56
SRP54-214ENST00000630962 CENPHQ9H3R5 247 aa-0.95□□□□□ -2.56
SRP54-214ENST00000630962 HSPB11Q9Y547 144 aa-0.95□□□□□ -2.56
SRP54-214ENST00000630962 ZNF236Q9UL36 1845 aa-0.95□□□□□ -2.56
SRP54-214ENST00000630962 MRC1P22897 1456 aa-0.95□□□□□ -2.56
SRP54-214ENST00000630962 BICRAQ9NZM4 1560 aa-0.96□□□□□ -2.56
SRP54-214ENST00000630962 SPRR2EP22531 72 aa-0.96□□□□□ -2.56
SRP54-214ENST00000630962 CCDC153Q494R4 210 aa-0.96□□□□□ -2.56
SRP54-214ENST00000630962 DEFB105AQ8NG35 78 aa-0.96□□□□□ -2.56
SRP54-214ENST00000630962 SPTSSAQ969W0 71 aa-0.96□□□□□ -2.56
SRP54-214ENST00000630962 GINS2Q9Y248 185 aa-0.96□□□□□ -2.56
SRP54-214ENST00000630962 V9GYH0 126 aa-0.96□□□□□ -2.56
SRP54-214ENST00000630962 EPG5Q9HCE0 2579 aa-0.96□□□□□ -2.56
SRP54-214ENST00000630962 HTTP42858 3142 aa-0.96□□□□□ -2.56
SRP54-214ENST00000630962 STARD9Q9P2P6 4700 aa-0.97□□□□□ -2.56
SRP54-214ENST00000630962 NWD2Q9ULI1 1742 aa-0.97□□□□□ -2.56
SRP54-214ENST00000630962 RRAS2P62070 204 aaPredicted RBP-0.97□□□□□ -2.56
SRP54-214ENST00000630962 CCL8P80075 99 aa-0.97□□□□□ -2.56
SRP54-214ENST00000630962 Q6ZUT4 128 aa-0.97□□□□□ -2.56
SRP54-214ENST00000630962 MRPL40Q9NQ50 206 aaKnown RBP-0.97□□□□□ -2.56
SRP54-214ENST00000630962 GOLGA4Q13439 2230 aaKnown RBP-0.97□□□□□ -2.57
SRP54-214ENST00000630962 HIST1H1AQ02539 215 aaPredicted RBP-0.98□□□□□ -2.57
SRP54-214ENST00000630962 COX17Q14061 63 aa-0.98□□□□□ -2.57
SRP54-214ENST00000630962 C10orf128Q5T292 105 aa-0.98□□□□□ -2.57
SRP54-214ENST00000630962 SMIM15Q7Z3B0 74 aa-0.98□□□□□ -2.57
SRP54-214ENST00000630962 AQP10Q96PS8 301 aa-0.98□□□□□ -2.57
SRP54-214ENST00000630962 DDA1Q9BW61 102 aa-0.98□□□□□ -2.57
SRP54-214ENST00000630962 KDM5AP29375 1690 aaKnown RBP-0.98□□□□□ -2.57
SRP54-214ENST00000630962 UBR4Q5T4S7 5183 aa-0.98□□□□□ -2.57
SRP54-214ENST00000630962 CDK5RAP2Q96SN8 1893 aa-0.99□□□□□ -2.57
SRP54-214ENST00000630962 DNAH6Q9C0G6 4158 aa-0.99□□□□□ -2.57
SRP54-214ENST00000630962 TACC2O95359 2948 aa-0.99□□□□□ -2.57
SRP54-214ENST00000630962 NBPF19A0A087WUL8 3843 aa-0.99□□□□□ -2.57
SRP54-214ENST00000630962 PITX3O75364 302 aa-0.99□□□□□ -2.57
SRP54-214ENST00000630962 NDUFB6O95139 128 aa-0.99□□□□□ -2.57
SRP54-214ENST00000630962 DBIP07108 87 aaKnown RBP-0.99□□□□□ -2.57
SRP54-214ENST00000630962 IGLC6P0CF74 106 aa-0.99□□□□□ -2.57
SRP54-214ENST00000630962 TMEM2Q9UHN6 1383 aa-0.99□□□□□ -2.57
SRP54-214ENST00000630962 USP9YO00507 2555 aaPredicted RBP-1□□□□□ -2.57
SRP54-214ENST00000630962 DEFB135Q30KP9 77 aa-1□□□□□ -2.57
SRP54-214ENST00000630962 DEFB123Q8N688 67 aa-1□□□□□ -2.57
SRP54-214ENST00000630962 SPANXCQ9NY87 97 aa-1□□□□□ -2.57
SRP54-214ENST00000630962 PXDNQ92626 1479 aa-1□□□□□ -2.57
SRP54-214ENST00000630962 MYH6P13533 1939 aa-1.01□□□□□ -2.57
SRP54-214ENST00000630962 TRAV13-2A0A0B4J235 113 aa-1.01□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms