RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 TRBV7-3A0A075B6L6 115 aa3.98□□□□□ -1.77
NEK3-211ENST00000629912 TRBV25-1A0A075B6N4 114 aa3.98□□□□□ -1.77
NEK3-211ENST00000629912 TRGV1A0A0A0MS02 117 aa3.98□□□□□ -1.77
NEK3-211ENST00000629912 C11orf86A6NJI1 115 aa3.98□□□□□ -1.77
NEK3-211ENST00000629912 WIPF1O43516 503 aa3.98□□□□□ -1.77
NEK3-211ENST00000629912 COTL1Q14019 142 aa3.98□□□□□ -1.77
NEK3-211ENST00000629912 TAL2Q16559 108 aa3.98□□□□□ -1.77
NEK3-211ENST00000629912 Q6ZTI0 123 aa3.98□□□□□ -1.77
NEK3-211ENST00000629912 MAPKAPK5-AS1Q8N8E1 139 aa3.98□□□□□ -1.77
NEK3-211ENST00000629912 KIR2DL5BQ8NHK3 375 aa3.98□□□□□ -1.77
NEK3-211ENST00000629912 FAM104AQ969W3 186 aa3.98□□□□□ -1.77
NEK3-211ENST00000629912 ZNF479Q96JC4 524 aa3.98□□□□□ -1.77
NEK3-211ENST00000629912 CHCHD7Q9BUK0 85 aa3.98□□□□□ -1.77
NEK3-211ENST00000629912 WFDC10AQ9H1F0 79 aa3.98□□□□□ -1.77
NEK3-211ENST00000629912 VCX2Q9H322 139 aa3.98□□□□□ -1.77
NEK3-211ENST00000629912 NOP10Q9NPE3 64 aaKnown RBP3.98□□□□□ -1.77
NEK3-211ENST00000629912 SPANXA1Q9NS26 97 aa3.98□□□□□ -1.77
NEK3-211ENST00000629912 TP73-AS1Q9UF72 201 aa3.98□□□□□ -1.77
NEK3-211ENST00000629912 Q9UF83 564 aa3.98□□□□□ -1.77
NEK3-211ENST00000629912 IGLV4-3A0A075B6K6 122 aa3.97□□□□□ -1.77
NEK3-211ENST00000629912 MYMXA0A1B0GTQ4 84 aa3.97□□□□□ -1.77
NEK3-211ENST00000629912 TRBV6-4A0A1B0GX49 114 aa3.97□□□□□ -1.77
NEK3-211ENST00000629912 H3BRM9 83 aa3.97□□□□□ -1.77
NEK3-211ENST00000629912 TAX1BP3O14907 124 aa3.97□□□□□ -1.77
NEK3-211ENST00000629912 ZNF25P17030 456 aaPredicted RBP3.97□□□□□ -1.77
NEK3-211ENST00000629912 HERVK_113P61574 105 aa3.97□□□□□ -1.77
NEK3-211ENST00000629912 MRPS36P82909 103 aaKnown RBP3.97□□□□□ -1.77
NEK3-211ENST00000629912 RPL36AP83881 106 aaKnown RBP3.97□□□□□ -1.77
NEK3-211ENST00000629912 DAZ4Q86SG3 579 aaKnown RBP3.97□□□□□ -1.77
NEK3-211ENST00000629912 LINC00612Q8N6U2 182 aa3.97□□□□□ -1.77
NEK3-211ENST00000629912 OR11H2Q8NH07 326 aa3.97□□□□□ -1.77
NEK3-211ENST00000629912 ZNRF2Q8NHG8 242 aa3.97□□□□□ -1.77
NEK3-211ENST00000629912 RPL36ALQ969Q0 106 aaKnown RBP3.97□□□□□ -1.77
NEK3-211ENST00000629912 TM2D2Q9BX73 214 aa3.97□□□□□ -1.77
NEK3-211ENST00000629912 DAZ3Q9NR90 486 aaKnown RBP3.97□□□□□ -1.77
NEK3-211ENST00000629912 COX11Q9Y6N1 276 aa3.97□□□□□ -1.77
NEK3-211ENST00000629912 TRAV8-6A0A0B4J262 113 aa3.96□□□□□ -1.78
NEK3-211ENST00000629912 A6NDN8 102 aa3.96□□□□□ -1.78
NEK3-211ENST00000629912 K7EQD1 137 aa3.96□□□□□ -1.78
NEK3-211ENST00000629912 TCTAP57738 103 aa3.96□□□□□ -1.78
NEK3-211ENST00000629912 UBE2D3P61077 147 aa3.96□□□□□ -1.78
NEK3-211ENST00000629912 UBE2D2P62837 147 aa3.96□□□□□ -1.78
NEK3-211ENST00000629912 SMAGPQ0VAQ4 97 aa3.96□□□□□ -1.78
NEK3-211ENST00000629912 FHL2Q14192 279 aa3.96□□□□□ -1.78
NEK3-211ENST00000629912 SBSPONQ8IVN8 264 aa3.96□□□□□ -1.78
NEK3-211ENST00000629912 LINC00469Q8N7U9 141 aa3.96□□□□□ -1.78
NEK3-211ENST00000629912 SLC25A29Q8N8R3 303 aa3.96□□□□□ -1.78
NEK3-211ENST00000629912 SPATA3Q8NHX4 192 aa3.96□□□□□ -1.78
NEK3-211ENST00000629912 DEFB104AQ8WTQ1 72 aa3.96□□□□□ -1.78
NEK3-211ENST00000629912 OPRPNQ99935 248 aaPredicted RBP3.96□□□□□ -1.78
NEK3-211ENST00000629912 PRADC1Q9BSG0 188 aa3.96□□□□□ -1.78
NEK3-211ENST00000629912 GTSF1LQ9H1H1 148 aa3.96□□□□□ -1.78
NEK3-211ENST00000629912 UBE2D4Q9Y2X8 147 aa3.96□□□□□ -1.78
NEK3-211ENST00000629912 CSDC2Q9Y534 153 aaKnown RBP3.96□□□□□ -1.78
NEK3-211ENST00000629912 NIPBLQ6KC79 2804 aaeCLIP3.95□□□□□ -1.78
NEK3-211ENST00000629912 TRGV2A0A075B6R0 118 aa3.95□□□□□ -1.78
NEK3-211ENST00000629912 TINCRA0A1B0GVN0 87 aa3.95□□□□□ -1.78
NEK3-211ENST00000629912 TMEM223A0PJW6 202 aa3.95□□□□□ -1.78
NEK3-211ENST00000629912 GAGE12BA1L429 117 aa3.95□□□□□ -1.78
NEK3-211ENST00000629912 H7C423 109 aa3.95□□□□□ -1.78
NEK3-211ENST00000629912 LEPROTO15243 131 aa3.95□□□□□ -1.78
NEK3-211ENST00000629912 GAGE7O76087 117 aa3.95□□□□□ -1.78
NEK3-211ENST00000629912 GAGE12FP0CL80 117 aa3.95□□□□□ -1.78
NEK3-211ENST00000629912 GAGE12GP0CL81 117 aa3.95□□□□□ -1.78
NEK3-211ENST00000629912 GAGE12IP0CL82 117 aa3.95□□□□□ -1.78
NEK3-211ENST00000629912 APOC4P55056 127 aa3.95□□□□□ -1.78
NEK3-211ENST00000629912 TIRAPP58753 221 aa3.95□□□□□ -1.78
NEK3-211ENST00000629912 FAM19A3Q7Z5A8 133 aa3.95□□□□□ -1.78
NEK3-211ENST00000629912 CEND1Q8N111 149 aa3.95□□□□□ -1.78
NEK3-211ENST00000629912 PHLDA1Q8WV24 401 aaPredicted RBP3.95□□□□□ -1.78
NEK3-211ENST00000629912 CHAC1Q9BUX1 264 aa3.95□□□□□ -1.78
NEK3-211ENST00000629912 TTTY13Q9BZ97 58 aa3.95□□□□□ -1.78
NEK3-211ENST00000629912 X6R8D5 127 aa3.95□□□□□ -1.78
NEK3-211ENST00000629912 TEP1Q99973 2627 aaKnown RBP3.95□□□□□ -1.78
NEK3-211ENST00000629912 JMJD1CQ15652 2540 aa3.95□□□□□ -1.78
NEK3-211ENST00000629912 NOTCH3Q9UM47 2321 aa3.95□□□□□ -1.78
NEK3-211ENST00000629912 TRGV4A0A0C4DH28 118 aa3.94□□□□□ -1.78
NEK3-211ENST00000629912 IGHV3-38A0A0C4DH36 116 aa3.94□□□□□ -1.78
NEK3-211ENST00000629912 A0A0J9YXV3 536 aa3.94□□□□□ -1.78
NEK3-211ENST00000629912 C9orf118A6NHY6 69 aa3.94□□□□□ -1.78
NEK3-211ENST00000629912 LYRM9A8MSI8 78 aa3.94□□□□□ -1.78
NEK3-211ENST00000629912 SMIM13P0DJ93 91 aa3.94□□□□□ -1.78
NEK3-211ENST00000629912 ZNF22P17026 224 aaPredicted RBP3.94□□□□□ -1.78
NEK3-211ENST00000629912 UBE2V1Q13404 147 aa3.94□□□□□ -1.78
NEK3-211ENST00000629912 TMEM170BQ5T4T1 132 aa3.94□□□□□ -1.78
NEK3-211ENST00000629912 NTM-AS1Q6ZSK4 140 aa3.94□□□□□ -1.78
NEK3-211ENST00000629912 PLEKHB2Q96CS7 222 aa3.94□□□□□ -1.78
NEK3-211ENST00000629912 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.93□□□□□ -1.78
NEK3-211ENST00000629912 IGLV5-45A0A087WSX0 123 aa3.93□□□□□ -1.78
NEK3-211ENST00000629912 A0A1B0GWB2 263 aa3.93□□□□□ -1.78
NEK3-211ENST00000629912 IGKV2-29A2NJV5 120 aaPredicted RBP3.93□□□□□ -1.78
NEK3-211ENST00000629912 GAGE12JA6NER3 117 aa3.93□□□□□ -1.78
NEK3-211ENST00000629912 ZNF815PA8K554 130 aa3.93□□□□□ -1.78
NEK3-211ENST00000629912 J3QQQ9 107 aa3.93□□□□□ -1.78
NEK3-211ENST00000629912 LINC00694P0DN24 101 aa3.93□□□□□ -1.78
NEK3-211ENST00000629912 GCSHP23434 173 aa3.93□□□□□ -1.78
NEK3-211ENST00000629912 UBE2D1P51668 147 aa3.93□□□□□ -1.78
NEK3-211ENST00000629912 EMP1P54849 157 aa3.93□□□□□ -1.78
NEK3-211ENST00000629912 GAGE4Q13068 117 aa3.93□□□□□ -1.78
NEK3-211ENST00000629912 GAGE5Q13069 117 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms