RNA–Protein interactions for RNA: ENST00000627809.1

SPTAN1-213, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 3

Gene SPTAN1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-213ENST00000627809 RPL39LQ96EH5 51 aaKnown RBP5.48□□□□□ -1.53
SPTAN1-213ENST00000627809 UPK3BQ9BT76 320 aa5.48□□□□□ -1.53
SPTAN1-213ENST00000627809 Q9H8V8 135 aa5.48□□□□□ -1.53
SPTAN1-213ENST00000627809 IGHV3-38A0A0C4DH36 116 aa5.47□□□□□ -1.53
SPTAN1-213ENST00000627809 SDHAF1A6NFY7 115 aa5.47□□□□□ -1.53
SPTAN1-213ENST00000627809 D6R8Y8 96 aa5.47□□□□□ -1.53
SPTAN1-213ENST00000627809 PHOX2AO14813 284 aa5.47□□□□□ -1.53
SPTAN1-213ENST00000627809 TNFRSF6BO95407 300 aa5.47□□□□□ -1.53
SPTAN1-213ENST00000627809 NCR2O95944 276 aa5.47□□□□□ -1.53
SPTAN1-213ENST00000627809 APCSP02743 223 aa5.47□□□□□ -1.53
SPTAN1-213ENST00000627809 C1orf134Q5TEV5 83 aa5.47□□□□□ -1.53
SPTAN1-213ENST00000627809 CBLN2Q8IUK8 224 aa5.47□□□□□ -1.53
SPTAN1-213ENST00000627809 NRACQ8N912 160 aa5.47□□□□□ -1.53
SPTAN1-213ENST00000627809 PRELID3AQ96N28 172 aa5.47□□□□□ -1.53
SPTAN1-213ENST00000627809 YPEL4Q96NS1 127 aa5.47□□□□□ -1.53
SPTAN1-213ENST00000627809 C20orf78Q9BR46 151 aa5.47□□□□□ -1.53
SPTAN1-213ENST00000627809 LAMTOR2Q9Y2Q5 125 aa5.47□□□□□ -1.53
SPTAN1-213ENST00000627809 TRBV6-8A0A0A6YYG3 113 aa5.46□□□□□ -1.54
SPTAN1-213ENST00000627809 I3L3M4 83 aa5.46□□□□□ -1.54
SPTAN1-213ENST00000627809 VCYO14598 125 aa5.46□□□□□ -1.54
SPTAN1-213ENST00000627809 SIVA1O15304 175 aa5.46□□□□□ -1.54
SPTAN1-213ENST00000627809 GAS8-AS1O95177 125 aa5.46□□□□□ -1.54
SPTAN1-213ENST00000627809 PMCHP20382 165 aa5.46□□□□□ -1.54
SPTAN1-213ENST00000627809 RPS10P46783 165 aaKnown RBP5.46□□□□□ -1.54
SPTAN1-213ENST00000627809 POLR2KP53803 58 aaKnown RBP5.46□□□□□ -1.54
SPTAN1-213ENST00000627809 SUMO2P61956 95 aaKnown RBP5.46□□□□□ -1.54
SPTAN1-213ENST00000627809 RPL32P62910 135 aaKnown RBP5.46□□□□□ -1.54
SPTAN1-213ENST00000627809 COTL1Q14019 142 aa5.46□□□□□ -1.54
SPTAN1-213ENST00000627809 C6orf223Q8N319 242 aa5.46□□□□□ -1.54
SPTAN1-213ENST00000627809 TMEM70Q9BUB7 260 aa5.46□□□□□ -1.54
SPTAN1-213ENST00000627809 MRPL18Q9H0U6 180 aaKnown RBP5.46□□□□□ -1.54
SPTAN1-213ENST00000627809 TRAPPC1Q9Y5R8 145 aa5.46□□□□□ -1.54
SPTAN1-213ENST00000627809 TRBV25-1A0A075B6N4 114 aa5.45□□□□□ -1.54
SPTAN1-213ENST00000627809 IGHV1-24A0A0C4DH33 117 aa5.45□□□□□ -1.54
SPTAN1-213ENST00000627809 TRBV27A0A0K0K1C4 114 aa5.45□□□□□ -1.54
SPTAN1-213ENST00000627809 PRSS47A8MTI9 375 aa5.45□□□□□ -1.54
SPTAN1-213ENST00000627809 TCAPO15273 167 aa5.45□□□□□ -1.54
SPTAN1-213ENST00000627809 ATP6V1G1O75348 118 aa5.45□□□□□ -1.54
SPTAN1-213ENST00000627809 NPYP01303 97 aa5.45□□□□□ -1.54
SPTAN1-213ENST00000627809 PKIAP61925 76 aa5.45□□□□□ -1.54
SPTAN1-213ENST00000627809 HAMPP81172 84 aa5.45□□□□□ -1.54
SPTAN1-213ENST00000627809 FABP9Q0Z7S8 132 aa5.45□□□□□ -1.54
SPTAN1-213ENST00000627809 WFDC2Q14508 124 aa5.45□□□□□ -1.54
SPTAN1-213ENST00000627809 NTM-AS1Q6ZSK4 140 aa5.45□□□□□ -1.54
SPTAN1-213ENST00000627809 TRAV9-2A0A087WT02 112 aa5.44□□□□□ -1.54
SPTAN1-213ENST00000627809 K7EP13 123 aa5.44□□□□□ -1.54
SPTAN1-213ENST00000627809 IQCJQ1A5X6 159 aa5.44□□□□□ -1.54
SPTAN1-213ENST00000627809 KIAA1644Q3SXP7 199 aa5.44□□□□□ -1.54
SPTAN1-213ENST00000627809 LINC00336Q6ZUF6 198 aa5.44□□□□□ -1.54
SPTAN1-213ENST00000627809 KIR2DL4Q99706 377 aa5.44□□□□□ -1.54
SPTAN1-213ENST00000627809 TMEM243Q9BU79 118 aa5.44□□□□□ -1.54
SPTAN1-213ENST00000627809 MAP1LC3AQ9H492 121 aa5.44□□□□□ -1.54
SPTAN1-213ENST00000627809 COLCA2A8K830 154 aa5.43□□□□□ -1.54
SPTAN1-213ENST00000627809 TMEM262E9PQX1 116 aa5.43□□□□□ -1.54
SPTAN1-213ENST00000627809 SCO1O75880 301 aa5.43□□□□□ -1.54
SPTAN1-213ENST00000627809 FCER1GP30273 86 aa5.43□□□□□ -1.54
SPTAN1-213ENST00000627809 AMTP48728 403 aa5.43□□□□□ -1.54
SPTAN1-213ENST00000627809 TTC32Q5I0X7 151 aa5.43□□□□□ -1.54
SPTAN1-213ENST00000627809 LINC01556Q5JQF7 62 aa5.43□□□□□ -1.54
SPTAN1-213ENST00000627809 SPATA12Q7Z6I5 190 aa5.43□□□□□ -1.54
SPTAN1-213ENST00000627809 NIT1Q86X76 327 aa5.43□□□□□ -1.54
SPTAN1-213ENST00000627809 CHCHD5Q9BSY4 110 aa5.43□□□□□ -1.54
SPTAN1-213ENST00000627809 ALKBH7Q9BT30 221 aaPredicted RBP5.43□□□□□ -1.54
SPTAN1-213ENST00000627809 CHCHD7Q9BUK0 85 aa5.43□□□□□ -1.54
SPTAN1-213ENST00000627809 SMIM2Q9BVW6 85 aa5.43□□□□□ -1.54
SPTAN1-213ENST00000627809 HERC1Q15751 4861 aa5.43□□□□□ -1.54
SPTAN1-213ENST00000627809 A0A087WX48 190 aa5.42□□□□□ -1.54
SPTAN1-213ENST00000627809 LOC389332A0A1B0GUA5 103 aa5.42□□□□□ -1.54
SPTAN1-213ENST00000627809 H7C423 109 aa5.42□□□□□ -1.54
SPTAN1-213ENST00000627809 UBE2L6O14933 153 aa5.42□□□□□ -1.54
SPTAN1-213ENST00000627809 TSHBP01222 138 aa5.42□□□□□ -1.54
SPTAN1-213ENST00000627809 RAB5AP20339 215 aa5.42□□□□□ -1.54
SPTAN1-213ENST00000627809 C10orf126Q8N4M7 172 aa5.42□□□□□ -1.54
SPTAN1-213ENST00000627809 Q8N8P6 123 aa5.42□□□□□ -1.54
SPTAN1-213ENST00000627809 DEFB104AQ8WTQ1 72 aa5.42□□□□□ -1.54
SPTAN1-213ENST00000627809 NXT2Q9NPJ8 142 aaKnown RBP5.42□□□□□ -1.54
SPTAN1-213ENST00000627809 K7EMI3 77 aa5.41□□□□□ -1.54
SPTAN1-213ENST00000627809 IGHV3-30P01768 117 aa5.41□□□□□ -1.54
SPTAN1-213ENST00000627809 IGHV3-33P01772 117 aa5.41□□□□□ -1.54
SPTAN1-213ENST00000627809 IGHV3-30-3P0DP02 117 aa5.41□□□□□ -1.54
SPTAN1-213ENST00000627809 IGHV3-30-5P0DP03 117 aa5.41□□□□□ -1.54
SPTAN1-213ENST00000627809 ESDP10768 282 aa5.41□□□□□ -1.54
SPTAN1-213ENST00000627809 SMAGPQ0VAQ4 97 aa5.41□□□□□ -1.54
SPTAN1-213ENST00000627809 GAGE6Q13070 117 aa5.41□□□□□ -1.54
SPTAN1-213ENST00000627809 MAPKAPK5-AS1Q8N8E1 139 aa5.41□□□□□ -1.54
SPTAN1-213ENST00000627809 PRSS3P2Q8NHM4 247 aa5.41□□□□□ -1.54
SPTAN1-213ENST00000627809 TMEM18Q96B42 140 aa5.41□□□□□ -1.54
SPTAN1-213ENST00000627809 VPS13BQ7Z7G8 4022 aa5.4□□□□□ -1.54
SPTAN1-213ENST00000627809 A0A1B0GUV1 79 aa5.4□□□□□ -1.54
SPTAN1-213ENST00000627809 C16orf90A8MZG2 172 aa5.4□□□□□ -1.54
SPTAN1-213ENST00000627809 TRGC2P03986 189 aa5.4□□□□□ -1.54
SPTAN1-213ENST00000627809 BTF3P20290 206 aaKnown RBP5.4□□□□□ -1.54
SPTAN1-213ENST00000627809 IFI27P40305 119 aaPredicted RBP5.4□□□□□ -1.54
SPTAN1-213ENST00000627809 KRTAP10-1P60331 282 aa5.4□□□□□ -1.54
SPTAN1-213ENST00000627809 ORMDL2Q53FV1 153 aa5.4□□□□□ -1.54
SPTAN1-213ENST00000627809 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.39□□□□□ -1.55
SPTAN1-213ENST00000627809 IGKV2-29A2NJV5 120 aaPredicted RBP5.39□□□□□ -1.55
SPTAN1-213ENST00000627809 IBA57-AS1B1ANH7 110 aa5.39□□□□□ -1.55
SPTAN1-213ENST00000627809 ANGP03950 147 aaKnown RBP5.39□□□□□ -1.55
SPTAN1-213ENST00000627809 ZNF25P17030 456 aaPredicted RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms