RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 DNAH17Q9UFH2 4485 aa4.26□□□□□ -1.73
TCF4-249ENST00000625716 LRCOL1A6NCL2 159 aa4.26□□□□□ -1.73
TCF4-249ENST00000625716 ZNF727A8MUV8 499 aa4.26□□□□□ -1.73
TCF4-249ENST00000625716 A8MWL6 223 aa4.26□□□□□ -1.73
TCF4-249ENST00000625716 M0QY20 66 aa4.26□□□□□ -1.73
TCF4-249ENST00000625716 ANGP03950 147 aaKnown RBP4.26□□□□□ -1.73
TCF4-249ENST00000625716 FUSP35637 526 aaKnown RBP eCLIP4.26□□□□□ -1.73
TCF4-249ENST00000625716 CTRLP40313 264 aa4.26□□□□□ -1.73
TCF4-249ENST00000625716 RAB14P61106 215 aa4.26□□□□□ -1.73
TCF4-249ENST00000625716 RASL11AQ6T310 242 aa4.26□□□□□ -1.73
TCF4-249ENST00000625716 Q8N814 137 aa4.26□□□□□ -1.73
TCF4-249ENST00000625716 C15orf54Q8N8G6 183 aa4.26□□□□□ -1.73
TCF4-249ENST00000625716 C1orf43Q9BWL3 253 aa4.26□□□□□ -1.73
TCF4-249ENST00000625716 NIT2Q9NQR4 276 aa4.26□□□□□ -1.73
TCF4-249ENST00000625716 IGHV1-24A0A0C4DH33 117 aa4.25□□□□□ -1.73
TCF4-249ENST00000625716 UBE2L6O14933 153 aa4.25□□□□□ -1.73
TCF4-249ENST00000625716 GAGE6Q13070 117 aa4.25□□□□□ -1.73
TCF4-249ENST00000625716 PEA15Q15121 130 aa4.25□□□□□ -1.73
TCF4-249ENST00000625716 FAM74A3Q4VXF1 159 aa4.25□□□□□ -1.73
TCF4-249ENST00000625716 LCE1AQ5T7P2 110 aa4.25□□□□□ -1.73
TCF4-249ENST00000625716 FAM231DQ6ZW35 169 aa4.25□□□□□ -1.73
TCF4-249ENST00000625716 Q8N976 141 aa4.25□□□□□ -1.73
TCF4-249ENST00000625716 PGLYRP4Q96LB8 373 aa4.25□□□□□ -1.73
TCF4-249ENST00000625716 SMDT1Q9H4I9 107 aa4.25□□□□□ -1.73
TCF4-249ENST00000625716 LECT2O14960 151 aa4.24□□□□□ -1.73
TCF4-249ENST00000625716 SRP19P09132 144 aaKnown RBP4.24□□□□□ -1.73
TCF4-249ENST00000625716 COTL1Q14019 142 aa4.24□□□□□ -1.73
TCF4-249ENST00000625716 TMEM241Q24JQ0 296 aa4.24□□□□□ -1.73
TCF4-249ENST00000625716 MPV17L2Q567V2 206 aa4.24□□□□□ -1.73
TCF4-249ENST00000625716 ATRAIDQ6UW56 229 aa4.24□□□□□ -1.73
TCF4-249ENST00000625716 LINC01551Q86U37 167 aa4.24□□□□□ -1.73
TCF4-249ENST00000625716 GTSF1Q8WW33 167 aa4.24□□□□□ -1.73
TCF4-249ENST00000625716 BAALCQ8WXS3 180 aa4.24□□□□□ -1.73
TCF4-249ENST00000625716 FRZBQ92765 325 aa4.24□□□□□ -1.73
TCF4-249ENST00000625716 TMEM243Q9BU79 118 aa4.24□□□□□ -1.73
TCF4-249ENST00000625716 CNFNQ9BYD5 112 aa4.24□□□□□ -1.73
TCF4-249ENST00000625716 OSTCQ9NRP0 149 aa4.24□□□□□ -1.73
TCF4-249ENST00000625716 PKD1P98161 4303 aa4.24□□□□□ -1.73
TCF4-249ENST00000625716 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.23□□□□□ -1.73
TCF4-249ENST00000625716 TRAV26-2A0A0B4J265 109 aa4.23□□□□□ -1.73
TCF4-249ENST00000625716 A0A1B0GUT8 65 aa4.23□□□□□ -1.73
TCF4-249ENST00000625716 FAM231BA6NCW3 169 aa4.23□□□□□ -1.73
TCF4-249ENST00000625716 AMTP48728 403 aa4.23□□□□□ -1.73
TCF4-249ENST00000625716 KRTAP10-1P60331 282 aa4.23□□□□□ -1.73
TCF4-249ENST00000625716 RBX1P62877 108 aa4.23□□□□□ -1.73
TCF4-249ENST00000625716 ADIRFQ15847 76 aa4.23□□□□□ -1.73
TCF4-249ENST00000625716 MIAQ16674 131 aa4.23□□□□□ -1.73
TCF4-249ENST00000625716 IQCJQ1A5X6 159 aa4.23□□□□□ -1.73
TCF4-249ENST00000625716 C14orf177Q52M58 125 aa4.23□□□□□ -1.73
TCF4-249ENST00000625716 NTM-AS1Q6ZSK4 140 aa4.23□□□□□ -1.73
TCF4-249ENST00000625716 TSKUQ8WUA8 353 aa4.23□□□□□ -1.73
TCF4-249ENST00000625716 GFRA4Q9GZZ7 299 aa4.23□□□□□ -1.73
TCF4-249ENST00000625716 NAT8Q9UHE5 227 aa4.23□□□□□ -1.73
TCF4-249ENST00000625716 PKHD1P08F94 4074 aa4.22□□□□□ -1.73
TCF4-249ENST00000625716 HIGD1CA8MV81 97 aa4.22□□□□□ -1.73
TCF4-249ENST00000625716 KRTAP29-1A8MX34 341 aaPredicted RBP4.22□□□□□ -1.73
TCF4-249ENST00000625716 HLA-DQA1P01909 254 aa4.22□□□□□ -1.73
TCF4-249ENST00000625716 PMCHP20382 165 aa4.22□□□□□ -1.73
TCF4-249ENST00000625716 FOXA3P55318 350 aaPredicted RBP4.22□□□□□ -1.73
TCF4-249ENST00000625716 REG3AQ06141 175 aa4.22□□□□□ -1.73
TCF4-249ENST00000625716 RIGQ13278 110 aa4.22□□□□□ -1.73
TCF4-249ENST00000625716 CLLU1Q5K131 121 aa4.22□□□□□ -1.73
TCF4-249ENST00000625716 AMMECR1LQ6DCA0 310 aa4.22□□□□□ -1.73
TCF4-249ENST00000625716 ENHOQ6UWT2 76 aa4.22□□□□□ -1.73
TCF4-249ENST00000625716 LINC00269Q8N2A0 174 aa4.22□□□□□ -1.73
TCF4-249ENST00000625716 GATD1Q8NB37 220 aa4.22□□□□□ -1.73
TCF4-249ENST00000625716 DEFB104AQ8WTQ1 72 aa4.22□□□□□ -1.73
TCF4-249ENST00000625716 NAT8BQ9UHF3 227 aa4.22□□□□□ -1.73
TCF4-249ENST00000625716 A0A1B0GUV1 79 aa4.21□□□□□ -1.74
TCF4-249ENST00000625716 SDHAF1A6NFY7 115 aa4.21□□□□□ -1.74
TCF4-249ENST00000625716 EPM2AB3EWF7 344 aa4.21□□□□□ -1.74
TCF4-249ENST00000625716 I3L3M4 83 aa4.21□□□□□ -1.74
TCF4-249ENST00000625716 NCR2O95944 276 aa4.21□□□□□ -1.74
TCF4-249ENST00000625716 APCSP02743 223 aa4.21□□□□□ -1.74
TCF4-249ENST00000625716 RPL23P62829 140 aaKnown RBP4.21□□□□□ -1.74
TCF4-249ENST00000625716 WFDC2Q14508 124 aa4.21□□□□□ -1.74
TCF4-249ENST00000625716 CLPSL2Q6UWE3 100 aa4.21□□□□□ -1.74
TCF4-249ENST00000625716 ISOC2Q96AB3 205 aa4.21□□□□□ -1.74
TCF4-249ENST00000625716 RPL39LQ96EH5 51 aaKnown RBP4.21□□□□□ -1.74
TCF4-249ENST00000625716 TMEM70Q9BUB7 260 aa4.21□□□□□ -1.74
TCF4-249ENST00000625716 TMEM191AQ9H0A3 160 aa4.21□□□□□ -1.74
TCF4-249ENST00000625716 ST20Q9HBF5 79 aa4.21□□□□□ -1.74
TCF4-249ENST00000625716 DNAH11Q96DT5 4516 aa4.2□□□□□ -1.74
TCF4-249ENST00000625716 IGLV10-54A0A075B6I4 117 aa4.2□□□□□ -1.74
TCF4-249ENST00000625716 TRAV8-4A0A0B4J246 113 aa4.2□□□□□ -1.74
TCF4-249ENST00000625716 H7C423 109 aa4.2□□□□□ -1.74
TCF4-249ENST00000625716 PPP1R17O96001 155 aa4.2□□□□□ -1.74
TCF4-249ENST00000625716 XGP55808 180 aa4.2□□□□□ -1.74
TCF4-249ENST00000625716 RNASEKQ6P5S7 137 aaKnown RBP4.2□□□□□ -1.74
TCF4-249ENST00000625716 NUP35Q8NFH5 326 aa4.2□□□□□ -1.74
TCF4-249ENST00000625716 MRAP2Q96G30 205 aa4.2□□□□□ -1.74
TCF4-249ENST00000625716 TMEM101Q96IK0 257 aa4.2□□□□□ -1.74
TCF4-249ENST00000625716 BTF3L4Q96K17 158 aa4.2□□□□□ -1.74
TCF4-249ENST00000625716 PRR34Q9NV39 138 aa4.2□□□□□ -1.74
TCF4-249ENST00000625716 V9GYV3 84 aa4.2□□□□□ -1.74
TCF4-249ENST00000625716 HERC2O95714 4834 aa4.19□□□□□ -1.74
TCF4-249ENST00000625716 IGLV4-60A0A075B6I1 120 aa4.19□□□□□ -1.74
TCF4-249ENST00000625716 IGKV3OR2-268A0A0C4DH90 116 aa4.19□□□□□ -1.74
TCF4-249ENST00000625716 TRBV6-5A0A0K0K1A5 114 aa4.19□□□□□ -1.74
TCF4-249ENST00000625716 A0A1B0GW15 77 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms