RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 COL5A1-AS1Q5SY13 56 aa14.1□□□□□ -0.15
TREX1-205ENST00000625293 Q6ZTI0 123 aa14.1□□□□□ -0.15
TREX1-205ENST00000625293 MPV17L2Q567V2 206 aa14.09□□□□□ -0.15
TREX1-205ENST00000625293 OR4C5Q8NGB2 326 aa14.09□□□□□ -0.15
TREX1-205ENST00000625293 MGAM2Q2M2H8 2515 aa14.08□□□□□ -0.16
TREX1-205ENST00000625293 TRAV4A0A0B4J268 109 aa14.08□□□□□ -0.16
TREX1-205ENST00000625293 SIVA1O15304 175 aa14.08□□□□□ -0.16
TREX1-205ENST00000625293 PMVKQ15126 192 aa14.08□□□□□ -0.16
TREX1-205ENST00000625293 ZNF479Q96JC4 524 aa14.08□□□□□ -0.16
TREX1-205ENST00000625293 FBN3Q75N90 2809 aa14.07□□□□□ -0.16
TREX1-205ENST00000625293 IGLV4-69A0A075B6H9 119 aa14.07□□□□□ -0.16
TREX1-205ENST00000625293 OVOL2Q9BRP0 275 aa14.07□□□□□ -0.16
TREX1-205ENST00000625293 CST9LQ9H4G1 147 aa14.07□□□□□ -0.16
TREX1-205ENST00000625293 NOP10Q9NPE3 64 aaKnown RBP14.07□□□□□ -0.16
TREX1-205ENST00000625293 BVES-AS1Q5T3Y7 98 aa14.06□□□□□ -0.16
TREX1-205ENST00000625293 RRN3P1Q2M238 152 aa14.06□□□□□ -0.16
TREX1-205ENST00000625293 WFDC9Q8NEX5 89 aa14.05□□□□□ -0.16
TREX1-205ENST00000625293 CHCHD7Q9BUK0 85 aa14.04□□□□□ -0.16
TREX1-205ENST00000625293 PYGO1Q9Y3Y4 419 aa14.04□□□□□ -0.16
TREX1-205ENST00000625293 TTTY13Q9BZ97 58 aa14.04□□□□□ -0.16
TREX1-205ENST00000625293 OPRPNQ99935 248 aaPredicted RBP14.03□□□□□ -0.16
TREX1-205ENST00000625293 IGLV4-3A0A075B6K6 122 aa14.02□□□□□ -0.16
TREX1-205ENST00000625293 TRBV10-1A0A0K0K1A3 114 aa14.02□□□□□ -0.16
TREX1-205ENST00000625293 C11orf86A6NJI1 115 aa14.02□□□□□ -0.16
TREX1-205ENST00000625293 FAM104AQ969W3 186 aa14.02□□□□□ -0.16
TREX1-205ENST00000625293 K7EQD1 137 aa14.01□□□□□ -0.17
TREX1-205ENST00000625293 PAPPA-AS1Q5QFB9 102 aa14.01□□□□□ -0.17
TREX1-205ENST00000625293 WIPF1O43516 503 aa14.01□□□□□ -0.17
TREX1-205ENST00000625293 HIGD1BQ9P298 99 aa14.01□□□□□ -0.17
TREX1-205ENST00000625293 E9PLD3 99 aa14□□□□□ -0.17
TREX1-205ENST00000625293 NPSP0C0P6 89 aa14□□□□□ -0.17
TREX1-205ENST00000625293 MAPKAPK5-AS1Q8N8E1 139 aa14□□□□□ -0.17
TREX1-205ENST00000625293 TRBV7-3A0A075B6L6 115 aa13.99□□□□□ -0.17
TREX1-205ENST00000625293 IGHV3-38A0A0C4DH36 116 aa13.99□□□□□ -0.17
TREX1-205ENST00000625293 GAGE12BA1L429 117 aa13.99□□□□□ -0.17
TREX1-205ENST00000625293 CIDEAO60543 219 aa13.99□□□□□ -0.17
TREX1-205ENST00000625293 GAGE7O76087 117 aa13.99□□□□□ -0.17
TREX1-205ENST00000625293 GAGE12FP0CL80 117 aa13.99□□□□□ -0.17
TREX1-205ENST00000625293 GAGE12GP0CL81 117 aa13.99□□□□□ -0.17
TREX1-205ENST00000625293 GAGE12IP0CL82 117 aa13.99□□□□□ -0.17
TREX1-205ENST00000625293 TMEM97Q5BJF2 176 aa13.99□□□□□ -0.17
TREX1-205ENST00000625293 ZNRF2Q8NHG8 242 aa13.99□□□□□ -0.17
TREX1-205ENST00000625293 PHLDA1Q8WV24 401 aaPredicted RBP13.99□□□□□ -0.17
TREX1-205ENST00000625293 HSD52Q0P140 79 aa13.99□□□□□ -0.17
TREX1-205ENST00000625293 COTL1Q14019 142 aa13.99□□□□□ -0.17
TREX1-205ENST00000625293 NFE4Q86UQ8 179 aa13.99□□□□□ -0.17
TREX1-205ENST00000625293 SLC25A29Q8N8R3 303 aa13.99□□□□□ -0.17
TREX1-205ENST00000625293 CRYBA4P53673 196 aa13.98□□□□□ -0.17
TREX1-205ENST00000625293 EMP1P54849 157 aa13.98□□□□□ -0.17
TREX1-205ENST00000625293 AMELXQ99217 191 aa13.98□□□□□ -0.17
TREX1-205ENST00000625293 X6R8D5 127 aa13.98□□□□□ -0.17
TREX1-205ENST00000625293 TRBV25-1A0A075B6N4 114 aa13.97□□□□□ -0.17
TREX1-205ENST00000625293 SPANXA1Q9NS26 97 aa13.97□□□□□ -0.17
TREX1-205ENST00000625293 UBE2D4Q9Y2X8 147 aa13.97□□□□□ -0.17
TREX1-205ENST00000625293 TRGV2A0A075B6R0 118 aa13.96□□□□□ -0.17
TREX1-205ENST00000625293 TRAV8-6A0A0B4J262 113 aa13.96□□□□□ -0.17
TREX1-205ENST00000625293 RPL36AP83881 106 aaKnown RBP13.96□□□□□ -0.17
TREX1-205ENST00000625293 LINC00612Q8N6U2 182 aa13.96□□□□□ -0.17
TREX1-205ENST00000625293 OR11H2Q8NH07 326 aa13.96□□□□□ -0.17
TREX1-205ENST00000625293 RPL36ALQ969Q0 106 aaKnown RBP13.96□□□□□ -0.17
TREX1-205ENST00000625293 UBE2D3P61077 147 aa13.96□□□□□ -0.18
TREX1-205ENST00000625293 UBE2D2P62837 147 aa13.96□□□□□ -0.18
TREX1-205ENST00000625293 KIR2DL5BQ8NHK3 375 aa13.96□□□□□ -0.18
TREX1-205ENST00000625293 PRADC1Q9BSG0 188 aa13.96□□□□□ -0.18
TREX1-205ENST00000625293 NOTCH3Q9UM47 2321 aa13.95□□□□□ -0.18
TREX1-205ENST00000625293 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.95□□□□□ -0.18
TREX1-205ENST00000625293 IGKV2-29A2NJV5 120 aaPredicted RBP13.95□□□□□ -0.18
TREX1-205ENST00000625293 VCX2Q9H322 139 aa13.95□□□□□ -0.18
TREX1-205ENST00000625293 TRBV6-4A0A1B0GX49 114 aa13.94□□□□□ -0.18
TREX1-205ENST00000625293 SMIM9A6NGZ8 99 aa13.94□□□□□ -0.18
TREX1-205ENST00000625293 CEMP1Q6PRD7 247 aaPredicted RBP13.94□□□□□ -0.18
TREX1-205ENST00000625293 DAZ4Q86SG3 579 aaKnown RBP13.94□□□□□ -0.18
TREX1-205ENST00000625293 CHAC1Q9BUX1 264 aa13.94□□□□□ -0.18
TREX1-205ENST00000625293 DAZ3Q9NR90 486 aaKnown RBP13.94□□□□□ -0.18
TREX1-205ENST00000625293 ZMAT5Q9UDW3 170 aaKnown RBP13.94□□□□□ -0.18
TREX1-205ENST00000625293 NOTCH1P46531 2555 aa13.94□□□□□ -0.18
TREX1-205ENST00000625293 SEC11AP67812 179 aa13.94□□□□□ -0.18
TREX1-205ENST00000625293 MYMXA0A1B0GTQ4 84 aa13.93□□□□□ -0.18
TREX1-205ENST00000625293 MEGF8Q7Z7M0 2845 aa13.92□□□□□ -0.18
TREX1-205ENST00000625293 TAX1BP3O14907 124 aa13.92□□□□□ -0.18
TREX1-205ENST00000625293 ZNF25P17030 456 aaPredicted RBP13.92□□□□□ -0.18
TREX1-205ENST00000625293 FHL2Q14192 279 aa13.92□□□□□ -0.18
TREX1-205ENST00000625293 ORAOV1Q8WV07 137 aa13.92□□□□□ -0.18
TREX1-205ENST00000625293 TIMM21Q9BVV7 248 aa13.92□□□□□ -0.18
TREX1-205ENST00000625293 GAGE12JA6NER3 117 aa13.91□□□□□ -0.18
TREX1-205ENST00000625293 HERVK_113P61574 105 aa13.91□□□□□ -0.18
TREX1-205ENST00000625293 GAGE1Q13065 139 aa13.91□□□□□ -0.18
TREX1-205ENST00000625293 GAGE4Q13068 117 aa13.91□□□□□ -0.18
TREX1-205ENST00000625293 GAGE5Q13069 117 aa13.91□□□□□ -0.18
TREX1-205ENST00000625293 GAGE13Q4V321 117 aa13.91□□□□□ -0.18
TREX1-205ENST00000625293 NTM-AS1Q6ZSK4 140 aa13.91□□□□□ -0.18
TREX1-205ENST00000625293 Q6ZVH6 145 aa13.91□□□□□ -0.18
TREX1-205ENST00000625293 COX11Q9Y6N1 276 aa13.91□□□□□ -0.18
TREX1-205ENST00000625293 ZNF22P17026 224 aaPredicted RBP13.91□□□□□ -0.18
TREX1-205ENST00000625293 A0A0J9YXV3 536 aa13.9□□□□□ -0.18
TREX1-205ENST00000625293 APOC4P55056 127 aa13.9□□□□□ -0.18
TREX1-205ENST00000625293 MRPS36P82909 103 aaKnown RBP13.9□□□□□ -0.18
TREX1-205ENST00000625293 TMEM170BQ5T4T1 132 aa13.9□□□□□ -0.18
TREX1-205ENST00000625293 SBSPONQ8IVN8 264 aa13.9□□□□□ -0.18
TREX1-205ENST00000625293 TMEM223A0PJW6 202 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms