RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 TIMM21Q9BVV7 248 aa11.73□□□□□ -0.53
LDB3-208ENST00000623007 VCX2Q9H322 139 aa11.73□□□□□ -0.53
LDB3-208ENST00000623007 RPL39P62891 51 aaKnown RBP11.72□□□□□ -0.53
LDB3-208ENST00000623007 NACAE9PAV3 2078 aa11.72□□□□□ -0.53
LDB3-208ENST00000623007 C2CD3Q4AC94 2353 aa11.72□□□□□ -0.53
LDB3-208ENST00000623007 E9PLD3 99 aa11.71□□□□□ -0.53
LDB3-208ENST00000623007 OR11H2Q8NH07 326 aa11.71□□□□□ -0.53
LDB3-208ENST00000623007 ZNF479Q96JC4 524 aa11.71□□□□□ -0.53
LDB3-208ENST00000623007 HSD52Q0P140 79 aa11.71□□□□□ -0.54
LDB3-208ENST00000623007 BATFQ16520 125 aa11.71□□□□□ -0.54
LDB3-208ENST00000623007 Q6ZSN1 163 aa11.71□□□□□ -0.54
LDB3-208ENST00000623007 NFE4Q86UQ8 179 aa11.71□□□□□ -0.54
LDB3-208ENST00000623007 PRADC1Q9BSG0 188 aa11.71□□□□□ -0.54
LDB3-208ENST00000623007 GTSF1LQ9H1H1 148 aa11.71□□□□□ -0.54
LDB3-208ENST00000623007 C11orf86A6NJI1 115 aa11.7□□□□□ -0.54
LDB3-208ENST00000623007 LYRM9A8MSI8 78 aa11.7□□□□□ -0.54
LDB3-208ENST00000623007 SEC11AP67812 179 aa11.7□□□□□ -0.54
LDB3-208ENST00000623007 LINC00612Q8N6U2 182 aa11.7□□□□□ -0.54
LDB3-208ENST00000623007 GAGE12BA1L429 117 aa11.69□□□□□ -0.54
LDB3-208ENST00000623007 H7C423 109 aa11.69□□□□□ -0.54
LDB3-208ENST00000623007 GAGE7O76087 117 aa11.69□□□□□ -0.54
LDB3-208ENST00000623007 GAGE12FP0CL80 117 aa11.69□□□□□ -0.54
LDB3-208ENST00000623007 GAGE12GP0CL81 117 aa11.69□□□□□ -0.54
LDB3-208ENST00000623007 GAGE12IP0CL82 117 aa11.69□□□□□ -0.54
LDB3-208ENST00000623007 ZNRF2Q8NHG8 242 aa11.69□□□□□ -0.54
LDB3-208ENST00000623007 IGLV4-3A0A075B6K6 122 aa11.68□□□□□ -0.54
LDB3-208ENST00000623007 TRGV4A0A0C4DH28 118 aa11.68□□□□□ -0.54
LDB3-208ENST00000623007 HINT1P49773 126 aaPredicted RBP11.68□□□□□ -0.54
LDB3-208ENST00000623007 MRPS36P82909 103 aaKnown RBP11.68□□□□□ -0.54
LDB3-208ENST00000623007 C2orf91Q6ZV80 131 aa11.68□□□□□ -0.54
LDB3-208ENST00000623007 C3orf56Q8N813 242 aa11.68□□□□□ -0.54
LDB3-208ENST00000623007 CHCHD7Q9BUK0 85 aa11.68□□□□□ -0.54
LDB3-208ENST00000623007 CSDC2Q9Y534 153 aaKnown RBP11.68□□□□□ -0.54
LDB3-208ENST00000623007 UBE2D3P61077 147 aa11.68□□□□□ -0.54
LDB3-208ENST00000623007 UBE2D2P62837 147 aa11.68□□□□□ -0.54
LDB3-208ENST00000623007 TAL2Q16559 108 aa11.68□□□□□ -0.54
LDB3-208ENST00000623007 MPV17L2Q567V2 206 aa11.68□□□□□ -0.54
LDB3-208ENST00000623007 SLC25A29Q8N8R3 303 aa11.68□□□□□ -0.54
LDB3-208ENST00000623007 AMELXQ99217 191 aa11.68□□□□□ -0.54
LDB3-208ENST00000623007 CUBNO60494 3623 aa11.67□□□□□ -0.54
LDB3-208ENST00000623007 IGLV4-69A0A075B6H9 119 aa11.67□□□□□ -0.54
LDB3-208ENST00000623007 BVES-AS1Q5T3Y7 98 aa11.67□□□□□ -0.54
LDB3-208ENST00000623007 A6NDN8 102 aa11.66□□□□□ -0.54
LDB3-208ENST00000623007 MIFP14174 115 aa11.66□□□□□ -0.54
LDB3-208ENST00000623007 PCP2Q8IVA1 136 aa11.66□□□□□ -0.54
LDB3-208ENST00000623007 UBE2D4Q9Y2X8 147 aa11.66□□□□□ -0.54
LDB3-208ENST00000623007 A0A1B0GV90 55 aa11.65□□□□□ -0.54
LDB3-208ENST00000623007 KRTAP24-1Q3LI83 254 aa11.65□□□□□ -0.54
LDB3-208ENST00000623007 DGAT2L7PQ6IED9 249 aa11.65□□□□□ -0.54
LDB3-208ENST00000623007 X6R8D5 127 aa11.65□□□□□ -0.54
LDB3-208ENST00000623007 IGKV2D-26A0A0A0MRZ7 120 aa11.65□□□□□ -0.55
LDB3-208ENST00000623007 TEX48A0A1B0GUV7 120 aa11.65□□□□□ -0.55
LDB3-208ENST00000623007 TRAV8-6A0A0B4J262 113 aa11.64□□□□□ -0.55
LDB3-208ENST00000623007 MYMXA0A1B0GTQ4 84 aa11.64□□□□□ -0.55
LDB3-208ENST00000623007 CHAC1Q9BUX1 264 aa11.64□□□□□ -0.55
LDB3-208ENST00000623007 SETD2Q9BYW2 2564 aaPredicted RBP11.64□□□□□ -0.55
LDB3-208ENST00000623007 TRBV25-1A0A075B6N4 114 aa11.63□□□□□ -0.55
LDB3-208ENST00000623007 A8MZ25 164 aa11.63□□□□□ -0.55
LDB3-208ENST00000623007 TMEM170BQ5T4T1 132 aa11.63□□□□□ -0.55
LDB3-208ENST00000623007 PHLDA1Q8WV24 401 aaPredicted RBP11.63□□□□□ -0.55
LDB3-208ENST00000623007 FHL2Q14192 279 aa11.62□□□□□ -0.55
LDB3-208ENST00000623007 ORAOV1Q8WV07 137 aa11.62□□□□□ -0.55
LDB3-208ENST00000623007 TINCRA0A1B0GVN0 87 aa11.62□□□□□ -0.55
LDB3-208ENST00000623007 ZNF25P17030 456 aaPredicted RBP11.62□□□□□ -0.55
LDB3-208ENST00000623007 PLEKHB2Q96CS7 222 aa11.62□□□□□ -0.55
LDB3-208ENST00000623007 GAGE12JA6NER3 117 aa11.61□□□□□ -0.55
LDB3-208ENST00000623007 UBE2L6O14933 153 aa11.61□□□□□ -0.55
LDB3-208ENST00000623007 GAGE1Q13065 139 aa11.61□□□□□ -0.55
LDB3-208ENST00000623007 GAGE4Q13068 117 aa11.61□□□□□ -0.55
LDB3-208ENST00000623007 GAGE5Q13069 117 aa11.61□□□□□ -0.55
LDB3-208ENST00000623007 GAGE13Q4V321 117 aa11.61□□□□□ -0.55
LDB3-208ENST00000623007 TMEM243Q9BU79 118 aa11.61□□□□□ -0.55
LDB3-208ENST00000623007 IGHV3-38A0A0C4DH36 116 aa11.6□□□□□ -0.55
LDB3-208ENST00000623007 EGFEM1PQ0D2K5 195 aa11.6□□□□□ -0.55
LDB3-208ENST00000623007 SPATA3Q8NHX4 192 aa11.6□□□□□ -0.55
LDB3-208ENST00000623007 RNF183Q96D59 192 aa11.6□□□□□ -0.55
LDB3-208ENST00000623007 TMEM101Q96IK0 257 aa11.6□□□□□ -0.55
LDB3-208ENST00000623007 PRO0255Q9UI72 69 aa11.6□□□□□ -0.55
LDB3-208ENST00000623007 LEPROTO15243 131 aa11.59□□□□□ -0.55
LDB3-208ENST00000623007 IGHV4-30-4P0DP06 118 aa11.59□□□□□ -0.55
LDB3-208ENST00000623007 EMP1P54849 157 aa11.59□□□□□ -0.55
LDB3-208ENST00000623007 DEFB104AQ8WTQ1 72 aa11.59□□□□□ -0.55
LDB3-208ENST00000623007 Q9UF83 564 aa11.59□□□□□ -0.55
LDB3-208ENST00000623007 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.59□□□□□ -0.55
LDB3-208ENST00000623007 TMEM223A0PJW6 202 aa11.59□□□□□ -0.55
LDB3-208ENST00000623007 IGKV2-29A2NJV5 120 aaPredicted RBP11.59□□□□□ -0.55
LDB3-208ENST00000623007 TCTAP57738 103 aa11.59□□□□□ -0.55
LDB3-208ENST00000623007 TIRAPP58753 221 aa11.59□□□□□ -0.55
LDB3-208ENST00000623007 DEFB135Q30KP9 77 aa11.59□□□□□ -0.55
LDB3-208ENST00000623007 ZNF815PA8K554 130 aa11.58□□□□□ -0.56
LDB3-208ENST00000623007 H3BRM9 83 aa11.58□□□□□ -0.56
LDB3-208ENST00000623007 LINC00694P0DN24 101 aa11.58□□□□□ -0.56
LDB3-208ENST00000623007 DEFB130BP0DP73 79 aa11.58□□□□□ -0.56
LDB3-208ENST00000623007 DEFB130AP0DP74 79 aa11.58□□□□□ -0.56
LDB3-208ENST00000623007 LGALS3P17931 250 aaKnown RBP11.58□□□□□ -0.56
LDB3-208ENST00000623007 AMMECR1LQ6DCA0 310 aa11.58□□□□□ -0.56
LDB3-208ENST00000623007 FAM19A3Q7Z5A8 133 aa11.58□□□□□ -0.56
LDB3-208ENST00000623007 SBSPONQ8IVN8 264 aa11.58□□□□□ -0.56
LDB3-208ENST00000623007 OR5A1Q8NGJ0 315 aa11.58□□□□□ -0.56
LDB3-208ENST00000623007 TM2D2Q9BX73 214 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms