RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 ZMAT4Q9H898 229 aa15.23■□□□□ 0.03
SPAST-204ENST00000621856 TRAV12-1A0A0B4J245 112 aa15.23■□□□□ 0.03
SPAST-204ENST00000621856 TRBV6-4A0A1B0GX49 114 aa15.23■□□□□ 0.03
SPAST-204ENST00000621856 GAGE12JA6NER3 117 aa15.23■□□□□ 0.03
SPAST-204ENST00000621856 IGIPA6NJ69 53 aa15.23■□□□□ 0.03
SPAST-204ENST00000621856 GAGE1Q13065 139 aa15.23■□□□□ 0.03
SPAST-204ENST00000621856 GAGE4Q13068 117 aa15.23■□□□□ 0.03
SPAST-204ENST00000621856 GAGE5Q13069 117 aa15.23■□□□□ 0.03
SPAST-204ENST00000621856 GAGE13Q4V321 117 aa15.23■□□□□ 0.03
SPAST-204ENST00000621856 SAMD5Q5TGI4 173 aa15.23■□□□□ 0.03
SPAST-204ENST00000621856 TIMM17AQ99595 171 aa15.23■□□□□ 0.03
SPAST-204ENST00000621856 FHL2Q14192 279 aa15.22■□□□□ 0.03
SPAST-204ENST00000621856 MIEN1Q9BRT3 115 aa15.22■□□□□ 0.03
SPAST-204ENST00000621856 DPM2O94777 84 aa15.21■□□□□ 0.03
SPAST-204ENST00000621856 Q8NAQ8 132 aa15.21■□□□□ 0.03
SPAST-204ENST00000621856 MRPL35Q9NZE8 188 aaKnown RBP15.21■□□□□ 0.03
SPAST-204ENST00000621856 IGKCP01834 107 aa15.2■□□□□ 0.02
SPAST-204ENST00000621856 IGLC3P0DOY3 106 aa15.2■□□□□ 0.02
SPAST-204ENST00000621856 C14orf144Q96I85 54 aa15.2■□□□□ 0.02
SPAST-204ENST00000621856 PRADC1Q9BSG0 188 aa15.2■□□□□ 0.02
SPAST-204ENST00000621856 CHTOPQ9Y3Y2 248 aaKnown RBP15.2■□□□□ 0.02
SPAST-204ENST00000621856 UBE2D3P61077 147 aa15.19■□□□□ 0.02
SPAST-204ENST00000621856 UBE2D2P62837 147 aa15.19■□□□□ 0.02
SPAST-204ENST00000621856 DAZ4Q86SG3 579 aaKnown RBP15.19■□□□□ 0.02
SPAST-204ENST00000621856 DAZ3Q9NR90 486 aaKnown RBP15.19■□□□□ 0.02
SPAST-204ENST00000621856 UQCR10Q9UDW1 63 aa15.19■□□□□ 0.02
SPAST-204ENST00000621856 CHCHD7Q9BUK0 85 aa15.18■□□□□ 0.02
SPAST-204ENST00000621856 LOC100131303A0A0U1RQF7 123 aa15.17■□□□□ 0.02
SPAST-204ENST00000621856 PRSS29PA6NIE9 313 aa15.17■□□□□ 0.02
SPAST-204ENST00000621856 F8VRH5 84 aa15.17■□□□□ 0.02
SPAST-204ENST00000621856 CMYA5Q8N3K9 4069 aa15.17■□□□□ 0.02
SPAST-204ENST00000621856 PMVKQ15126 192 aa15.17■□□□□ 0.02
SPAST-204ENST00000621856 STPG4Q8N801 248 aa15.17■□□□□ 0.02
SPAST-204ENST00000621856 MDFIQ99750 246 aa15.17■□□□□ 0.02
SPAST-204ENST00000621856 PLNP26678 52 aa15.16■□□□□ 0.02
SPAST-204ENST00000621856 DAD1P61803 113 aa15.16■□□□□ 0.02
SPAST-204ENST00000621856 DEFA6Q01524 100 aa15.16■□□□□ 0.02
SPAST-204ENST00000621856 HHLA3Q9XRX5 114 aa15.16■□□□□ 0.02
SPAST-204ENST00000621856 NBEAL2Q6ZNJ1 2754 aa15.15■□□□□ 0.02
SPAST-204ENST00000621856 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.15■□□□□ 0.02
SPAST-204ENST00000621856 IGKV2-29A2NJV5 120 aaPredicted RBP15.15■□□□□ 0.02
SPAST-204ENST00000621856 ANKRD39Q53RE8 183 aa15.15■□□□□ 0.02
SPAST-204ENST00000621856 RETNQ9HD89 108 aa15.15■□□□□ 0.02
SPAST-204ENST00000621856 PKD1L1Q8TDX9 2849 aa15.15■□□□□ 0.02
SPAST-204ENST00000621856 ZC2HC1BQ5TFG8 222 aa15.14■□□□□ 0.01
SPAST-204ENST00000621856 OPRPNQ99935 248 aaPredicted RBP15.14■□□□□ 0.01
SPAST-204ENST00000621856 CELA1Q9UNI1 258 aa15.14■□□□□ 0.01
SPAST-204ENST00000621856 SPART-AS1P0CW21 52 aa15.14■□□□□ 0.01
SPAST-204ENST00000621856 TCTAP57738 103 aa15.14■□□□□ 0.01
SPAST-204ENST00000621856 CST9LQ9H4G1 147 aa15.14■□□□□ 0.01
SPAST-204ENST00000621856 PYGO1Q9Y3Y4 419 aa15.14■□□□□ 0.01
SPAST-204ENST00000621856 IGLV4-3A0A075B6K6 122 aa15.12■□□□□ 0.01
SPAST-204ENST00000621856 CRYBA4P53673 196 aa15.12■□□□□ 0.01
SPAST-204ENST00000621856 PAPPA-AS1Q5QFB9 102 aa15.12■□□□□ 0.01
SPAST-204ENST00000621856 SPANXA1Q9NS26 97 aa15.12■□□□□ 0.01
SPAST-204ENST00000621856 PRO0255Q9UI72 69 aa15.12■□□□□ 0.01
SPAST-204ENST00000621856 HNRNPA3P51991 378 aaKnown RBP15.11■□□□□ 0.01
SPAST-204ENST00000621856 VCX2Q9H322 139 aa15.11■□□□□ 0.01
SPAST-204ENST00000621856 SLC25A34Q6PIV7 304 aa15.1■□□□□ 0.01
SPAST-204ENST00000621856 CEMP1Q6PRD7 247 aaPredicted RBP15.1■□□□□ 0.01
SPAST-204ENST00000621856 NTM-AS1Q6ZSK4 140 aa15.1■□□□□ 0.01
SPAST-204ENST00000621856 UBE2D4Q9Y2X8 147 aa15.1■□□□□ 0.01
SPAST-204ENST00000621856 ATP5G1P05496 136 aa15.09■□□□□ 0.01
SPAST-204ENST00000621856 GYPEP15421 78 aa15.09■□□□□ 0.01
SPAST-204ENST00000621856 PRB2P02812 416 aaPredicted RBP15.09■□□□□ 0.01
SPAST-204ENST00000621856 COX8AP10176 69 aa15.09■□□□□ 0.01
SPAST-204ENST00000621856 GTSF1LQ9H1H1 148 aa15.09■□□□□ 0.01
SPAST-204ENST00000621856 TEX48A0A1B0GUV7 120 aa15.08■□□□□ 0
SPAST-204ENST00000621856 PAX4O43316 350 aa15.08■□□□□ 0
SPAST-204ENST00000621856 NPSP0C0P6 89 aa15.08■□□□□ 0
SPAST-204ENST00000621856 LINC00694P0DN24 101 aa15.08■□□□□ 0
SPAST-204ENST00000621856 NMUP48645 174 aa15.08■□□□□ 0
SPAST-204ENST00000621856 IGLV4-69A0A075B6H9 119 aa15.07■□□□□ 0
SPAST-204ENST00000621856 DGAT2L7PQ6IED9 249 aa15.06■□□□□ 0
SPAST-204ENST00000621856 TMEM243Q9BU79 118 aa15.06■□□□□ 0
SPAST-204ENST00000621856 TP73-AS1Q9UF72 201 aa15.06■□□□□ 0
SPAST-204ENST00000621856 TIMM21Q9BVV7 248 aa15.06■□□□□ 0
SPAST-204ENST00000621856 TRBV25-1A0A075B6N4 114 aa15.05■□□□□ -0
SPAST-204ENST00000621856 C11orf86A6NJI1 115 aa15.05■□□□□ -0
SPAST-204ENST00000621856 UBE2L6O14933 153 aa15.05■□□□□ -0
SPAST-204ENST00000621856 HTN3P15516 51 aa15.05■□□□□ -0
SPAST-204ENST00000621856 CTAG1AP78358 180 aa15.05■□□□□ -0
SPAST-204ENST00000621856 RNASE13Q5GAN3 156 aaKnown RBP15.05■□□□□ -0
SPAST-204ENST00000621856 Q6ZUT4 128 aa15.05■□□□□ -0
SPAST-204ENST00000621856 ANK2Q01484 3957 aa15.05■□□□□ -0
SPAST-204ENST00000621856 F5H768 121 aa15.04■□□□□ -0
SPAST-204ENST00000621856 SMAGPQ0VAQ4 97 aa15.04■□□□□ -0
SPAST-204ENST00000621856 SBSPONQ8IVN8 264 aa15.04■□□□□ -0
SPAST-204ENST00000621856 ATP6V0E2Q8NHE4 81 aa15.04■□□□□ -0
SPAST-204ENST00000621856 FAM104AQ969W3 186 aa15.04■□□□□ -0
SPAST-204ENST00000621856 AMELXQ99217 191 aa15.04■□□□□ -0
SPAST-204ENST00000621856 A0A0J9YY99 117 aa15.03■□□□□ -0
SPAST-204ENST00000621856 FGF6P10767 208 aa15.03■□□□□ -0
SPAST-204ENST00000621856 TMEM97Q5BJF2 176 aa15.03■□□□□ -0
SPAST-204ENST00000621856 IGKV2D-26A0A0A0MRZ7 120 aa15.03■□□□□ -0
SPAST-204ENST00000621856 K7EIL1 84 aa15.02□□□□□ -0.01
SPAST-204ENST00000621856 MRPS36P82909 103 aaKnown RBP15.02□□□□□ -0.01
SPAST-204ENST00000621856 C2orf88Q9BSF0 95 aa15.02□□□□□ -0.01
SPAST-204ENST00000621856 CHAC1Q9BUX1 264 aa15.02□□□□□ -0.01
SPAST-204ENST00000621856 DNAH3Q8TD57 4116 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms