RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 PPP1R17O96001 155 aa7.73□□□□□ -1.17
VPS11-207ENST00000620429 ADORA2A-AS1P86434 159 aa7.73□□□□□ -1.17
VPS11-207ENST00000620429 PRAC2D3DTV9 90 aa7.73□□□□□ -1.17
VPS11-207ENST00000620429 BUB3O43684 328 aa7.73□□□□□ -1.17
VPS11-207ENST00000620429 RPL39LQ96EH5 51 aaKnown RBP7.73□□□□□ -1.17
VPS11-207ENST00000620429 TP53TG1Q9Y2A0 90 aa7.73□□□□□ -1.17
VPS11-207ENST00000620429 SERP1Q9Y6X1 66 aa7.73□□□□□ -1.17
VPS11-207ENST00000620429 INAFM2P0DMQ5 153 aa7.72□□□□□ -1.17
VPS11-207ENST00000620429 FHL2Q14192 279 aa7.72□□□□□ -1.17
VPS11-207ENST00000620429 C1orf195Q5TG92 126 aa7.72□□□□□ -1.17
VPS11-207ENST00000620429 IGHV3OR16-10A0A075B7F0 116 aa7.72□□□□□ -1.17
VPS11-207ENST00000620429 FAM236DA0A1B0GTK5 79 aa7.72□□□□□ -1.17
VPS11-207ENST00000620429 FAM236CP0DP71 79 aa7.72□□□□□ -1.17
VPS11-207ENST00000620429 DAZ2Q13117 558 aaKnown RBP7.72□□□□□ -1.17
VPS11-207ENST00000620429 Q6JHZ5 121 aa7.72□□□□□ -1.17
VPS11-207ENST00000620429 DAZ4Q86SG3 579 aaKnown RBP7.72□□□□□ -1.17
VPS11-207ENST00000620429 RNF182Q8N6D2 247 aa7.72□□□□□ -1.17
VPS11-207ENST00000620429 C16orf95Q9H693 158 aa7.72□□□□□ -1.17
VPS11-207ENST00000620429 DAZ1Q9NQZ3 744 aaKnown RBP7.72□□□□□ -1.17
VPS11-207ENST00000620429 DAZ3Q9NR90 486 aaKnown RBP7.72□□□□□ -1.17
VPS11-207ENST00000620429 DPM3Q9P2X0 92 aa7.72□□□□□ -1.17
VPS11-207ENST00000620429 HECTD1Q9ULT8 2610 aa7.72□□□□□ -1.17
VPS11-207ENST00000620429 TIRAPP58753 221 aa7.71□□□□□ -1.18
VPS11-207ENST00000620429 FAM222AQ5U5X8 452 aa7.71□□□□□ -1.18
VPS11-207ENST00000620429 TMEM61Q8N0U2 210 aa7.71□□□□□ -1.18
VPS11-207ENST00000620429 CTSGP08311 255 aa7.71□□□□□ -1.18
VPS11-207ENST00000620429 NPBQ8NG41 125 aa7.71□□□□□ -1.18
VPS11-207ENST00000620429 USP17L23D6RBM5 183 aa7.7□□□□□ -1.18
VPS11-207ENST00000620429 PRSS2P07478 247 aa7.7□□□□□ -1.18
VPS11-207ENST00000620429 NDPQ00604 133 aa7.7□□□□□ -1.18
VPS11-207ENST00000620429 SPTBN1Q01082 2364 aaKnown RBP7.7□□□□□ -1.18
VPS11-207ENST00000620429 C9orf139Q6ZV77 190 aa7.7□□□□□ -1.18
VPS11-207ENST00000620429 IGHV3-66A0A0C4DH42 116 aa7.69□□□□□ -1.18
VPS11-207ENST00000620429 GPHB5Q86YW7 130 aa7.69□□□□□ -1.18
VPS11-207ENST00000620429 MIAQ16674 131 aa7.69□□□□□ -1.18
VPS11-207ENST00000620429 FBXL19-AS1Q494R0 122 aa7.69□□□□□ -1.18
VPS11-207ENST00000620429 IGHV3OR16-13A0A075B7E8 117 aa7.68□□□□□ -1.18
VPS11-207ENST00000620429 IGHV3-74A0A0B4J1X5 117 aa7.68□□□□□ -1.18
VPS11-207ENST00000620429 COX7A2LO14548 114 aa7.68□□□□□ -1.18
VPS11-207ENST00000620429 IGHV1-69P01742 117 aa7.68□□□□□ -1.18
VPS11-207ENST00000620429 BEAN1Q3B7T3 259 aa7.68□□□□□ -1.18
VPS11-207ENST00000620429 LINC01561Q8N1V8 128 aa7.68□□□□□ -1.18
VPS11-207ENST00000620429 ZFAND3Q9H8U3 227 aa7.68□□□□□ -1.18
VPS11-207ENST00000620429 C22orf24Q9Y442 160 aa7.68□□□□□ -1.18
VPS11-207ENST00000620429 AVPP01185 164 aa7.68□□□□□ -1.18
VPS11-207ENST00000620429 Q6ZSV7 163 aa7.68□□□□□ -1.18
VPS11-207ENST00000620429 COL12A1Q99715 3063 aa7.67□□□□□ -1.18
VPS11-207ENST00000620429 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.67□□□□□ -1.18
VPS11-207ENST00000620429 SMIM26A0A096LP01 95 aa7.67□□□□□ -1.18
VPS11-207ENST00000620429 A0A1W2PPR1 153 aa7.67□□□□□ -1.18
VPS11-207ENST00000620429 RPL39P62891 51 aaKnown RBP7.67□□□□□ -1.18
VPS11-207ENST00000620429 TMEM243Q9BU79 118 aa7.67□□□□□ -1.18
VPS11-207ENST00000620429 MED13LQ71F56 2210 aa7.67□□□□□ -1.18
VPS11-207ENST00000620429 USP9YO00507 2555 aaPredicted RBP7.67□□□□□ -1.18
VPS11-207ENST00000620429 IGHV4OR15-8A0A075B7B6 117 aa7.66□□□□□ -1.18
VPS11-207ENST00000620429 A0A087WW49 117 aa7.66□□□□□ -1.18
VPS11-207ENST00000620429 POLR2KP53803 58 aaKnown RBP7.66□□□□□ -1.18
VPS11-207ENST00000620429 ADAMTSL4-AS1Q5T5F5 129 aa7.66□□□□□ -1.18
VPS11-207ENST00000620429 PRRC2AP48634 2157 aaKnown RBP7.66□□□□□ -1.18
VPS11-207ENST00000620429 HIVEP3Q5T1R4 2406 aa7.66□□□□□ -1.18
VPS11-207ENST00000620429 IGHV3-49A0A0A0MS15 119 aa7.66□□□□□ -1.18
VPS11-207ENST00000620429 BAALC-AS2P0C853 105 aa7.66□□□□□ -1.18
VPS11-207ENST00000620429 C16orf92Q96LL3 132 aa7.66□□□□□ -1.18
VPS11-207ENST00000620429 AKAP6Q13023 2319 aa7.66□□□□□ -1.18
VPS11-207ENST00000620429 LY6G5BQ8NDX9 201 aa7.65□□□□□ -1.18
VPS11-207ENST00000620429 FAM223BA6NKX1 122 aa7.65□□□□□ -1.18
VPS11-207ENST00000620429 M0R1W7 72 aa7.65□□□□□ -1.18
VPS11-207ENST00000620429 MRPS36P82909 103 aaKnown RBP7.65□□□□□ -1.18
VPS11-207ENST00000620429 C15orf32Q32M92 178 aa7.65□□□□□ -1.18
VPS11-207ENST00000620429 IGHV3-30-3P0DP02 117 aa7.65□□□□□ -1.19
VPS11-207ENST00000620429 FP248Q71RG6 208 aaPredicted RBP7.65□□□□□ -1.19
VPS11-207ENST00000620429 FAM223AQ8IWN6 122 aa7.65□□□□□ -1.19
VPS11-207ENST00000620429 C20orf173Q96LM9 149 aa7.65□□□□□ -1.19
VPS11-207ENST00000620429 IGHV3-64A0A075B6Q5 118 aa7.64□□□□□ -1.19
VPS11-207ENST00000620429 A0A087WVE0 104 aa7.64□□□□□ -1.19
VPS11-207ENST00000620429 VCYO14598 125 aa7.64□□□□□ -1.19
VPS11-207ENST00000620429 MGPP08493 103 aa7.64□□□□□ -1.19
VPS11-207ENST00000620429 UBE2D4Q9Y2X8 147 aa7.64□□□□□ -1.19
VPS11-207ENST00000620429 IGKV3D-7A0A0C4DH55 119 aa7.64□□□□□ -1.19
VPS11-207ENST00000620429 IGHG2P01859 326 aa7.64□□□□□ -1.19
VPS11-207ENST00000620429 MED14OSP0DP75 135 aa7.64□□□□□ -1.19
VPS11-207ENST00000620429 ECSCRQ19T08 205 aa7.64□□□□□ -1.19
VPS11-207ENST00000620429 C11orf71Q6IPW1 123 aa7.64□□□□□ -1.19
VPS11-207ENST00000620429 WFDC11Q8NEX6 87 aa7.64□□□□□ -1.19
VPS11-207ENST00000620429 SPTAN1Q13813 2472 aaKnown RBP7.63□□□□□ -1.19
VPS11-207ENST00000620429 IGHV7-81A0A0B4J1V7 117 aa7.63□□□□□ -1.19
VPS11-207ENST00000620429 ODF3BA8MYP8 253 aa7.63□□□□□ -1.19
VPS11-207ENST00000620429 TIMM17BO60830 172 aa7.63□□□□□ -1.19
VPS11-207ENST00000620429 LRRK2Q5S007 2527 aa7.63□□□□□ -1.19
VPS11-207ENST00000620429 VPS13CQ709C8 3753 aa7.63□□□□□ -1.19
VPS11-207ENST00000620429 FLNCQ14315 2725 aa7.63□□□□□ -1.19
VPS11-207ENST00000620429 ZNF580Q9UK33 172 aa7.63□□□□□ -1.19
VPS11-207ENST00000620429 UNC79Q9P2D8 2635 aa7.62□□□□□ -1.19
VPS11-207ENST00000620429 TRAV12-3A0A0B4J271 114 aa7.62□□□□□ -1.19
VPS11-207ENST00000620429 CLEC19AQ6UXS0 136 aa7.62□□□□□ -1.19
VPS11-207ENST00000620429 VMO1Q7Z5L0 202 aa7.62□□□□□ -1.19
VPS11-207ENST00000620429 NACAE9PAV3 2078 aa7.62□□□□□ -1.19
VPS11-207ENST00000620429 DOPEY1Q5JWR5 2465 aa7.62□□□□□ -1.19
VPS11-207ENST00000620429 CLPSL1A2RUU4 121 aa7.62□□□□□ -1.19
VPS11-207ENST00000620429 KNCNA6PVL3 124 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 167.7 ms