RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 TMEM97Q5BJF2 176 aa15.47■□□□□ 0.07
SGMS1-210ENST00000619438 PCP2Q8IVA1 136 aa15.47■□□□□ 0.07
SGMS1-210ENST00000619438 TP53TG1Q9Y2A0 90 aa15.47■□□□□ 0.07
SGMS1-210ENST00000619438 CHTOPQ9Y3Y2 248 aaKnown RBP15.47■□□□□ 0.07
SGMS1-210ENST00000619438 COX11Q9Y6N1 276 aa15.47■□□□□ 0.07
SGMS1-210ENST00000619438 A8MWV9 139 aa15.46■□□□□ 0.07
SGMS1-210ENST00000619438 RHOHQ15669 191 aa15.46■□□□□ 0.07
SGMS1-210ENST00000619438 NEGR1Q7Z3B1 354 aa15.46■□□□□ 0.07
SGMS1-210ENST00000619438 TMEM141Q96I45 108 aa15.46■□□□□ 0.07
SGMS1-210ENST00000619438 HIGD1BQ9P298 99 aa15.46■□□□□ 0.07
SGMS1-210ENST00000619438 IGKV2D-26A0A0A0MRZ7 120 aa15.45■□□□□ 0.06
SGMS1-210ENST00000619438 IGIPA6NJ69 53 aa15.45■□□□□ 0.06
SGMS1-210ENST00000619438 SEC11AP67812 179 aa15.45■□□□□ 0.06
SGMS1-210ENST00000619438 HSD52Q0P140 79 aa15.45■□□□□ 0.06
SGMS1-210ENST00000619438 RNF183Q96D59 192 aa15.45■□□□□ 0.06
SGMS1-210ENST00000619438 TIMM17AQ99595 171 aa15.45■□□□□ 0.06
SGMS1-210ENST00000619438 SPXQ9BT56 116 aa15.45■□□□□ 0.06
SGMS1-210ENST00000619438 KMT2CQ8NEZ4 4911 aaKnown RBP15.45■□□□□ 0.06
SGMS1-210ENST00000619438 UFSP1Q6NVU6 142 aa15.44■□□□□ 0.06
SGMS1-210ENST00000619438 C11orf72Q8NBR9 251 aa15.43■□□□□ 0.06
SGMS1-210ENST00000619438 PRSS29PA6NIE9 313 aa15.42■□□□□ 0.06
SGMS1-210ENST00000619438 LINC01587Q99440 93 aa15.42■□□□□ 0.06
SGMS1-210ENST00000619438 CSMD3Q7Z407 3707 aa15.41■□□□□ 0.06
SGMS1-210ENST00000619438 TAX1BP3O14907 124 aa15.41■□□□□ 0.06
SGMS1-210ENST00000619438 TSHBP01222 138 aa15.41■□□□□ 0.06
SGMS1-210ENST00000619438 TCTAP57738 103 aa15.41■□□□□ 0.06
SGMS1-210ENST00000619438 I3L3M4 83 aa15.4■□□□□ 0.06
SGMS1-210ENST00000619438 HTN1P15515 57 aa15.4■□□□□ 0.06
SGMS1-210ENST00000619438 ZFAND6Q6FIF0 208 aa15.4■□□□□ 0.06
SGMS1-210ENST00000619438 IL17DQ8TAD2 202 aa15.4■□□□□ 0.06
SGMS1-210ENST00000619438 RHODO00212 210 aa15.39■□□□□ 0.05
SGMS1-210ENST00000619438 PAPPA-AS1Q5QFB9 102 aa15.39■□□□□ 0.05
SGMS1-210ENST00000619438 CASC10Q5T4H9 136 aa15.39■□□□□ 0.05
SGMS1-210ENST00000619438 PMVKQ15126 192 aa15.38■□□□□ 0.05
SGMS1-210ENST00000619438 A0A0J9YWU9 116 aa15.38■□□□□ 0.05
SGMS1-210ENST00000619438 OR11H2Q8NH07 326 aa15.38■□□□□ 0.05
SGMS1-210ENST00000619438 RPL39P62891 51 aaKnown RBP15.37■□□□□ 0.05
SGMS1-210ENST00000619438 CFAP126Q5VTH2 177 aa15.37■□□□□ 0.05
SGMS1-210ENST00000619438 TENM2Q9NT68 2774 aa15.37■□□□□ 0.05
SGMS1-210ENST00000619438 C20orf203Q8NBC4 194 aa15.36■□□□□ 0.05
SGMS1-210ENST00000619438 CST9LQ9H4G1 147 aa15.36■□□□□ 0.05
SGMS1-210ENST00000619438 TRBV25-1A0A075B6N4 114 aa15.35■□□□□ 0.05
SGMS1-210ENST00000619438 A6NDN8 102 aa15.35■□□□□ 0.05
SGMS1-210ENST00000619438 NPSP0C0P6 89 aa15.35■□□□□ 0.05
SGMS1-210ENST00000619438 P0DMU3 169 aa15.35■□□□□ 0.05
SGMS1-210ENST00000619438 FAM231AP0DMU4 169 aa15.35■□□□□ 0.05
SGMS1-210ENST00000619438 FAM231CP0DMU5 169 aa15.35■□□□□ 0.05
SGMS1-210ENST00000619438 C1orf158Q8N1D5 194 aa15.35■□□□□ 0.05
SGMS1-210ENST00000619438 XCL2Q9UBD3 114 aa15.35■□□□□ 0.05
SGMS1-210ENST00000619438 E9PLD3 99 aa15.35■□□□□ 0.05
SGMS1-210ENST00000619438 RS1O15537 224 aa15.35■□□□□ 0.05
SGMS1-210ENST00000619438 PRM2P04554 102 aa15.35■□□□□ 0.05
SGMS1-210ENST00000619438 IGLV4-69A0A075B6H9 119 aa15.34■□□□□ 0.05
SGMS1-210ENST00000619438 Q6ZVH6 145 aa15.34■□□□□ 0.05
SGMS1-210ENST00000619438 CHAC1Q9BUX1 264 aa15.34■□□□□ 0.05
SGMS1-210ENST00000619438 C1QTNF4Q9BXJ3 329 aa15.34■□□□□ 0.05
SGMS1-210ENST00000619438 TTTY13Q9BZ97 58 aa15.34■□□□□ 0.05
SGMS1-210ENST00000619438 GIG44P09565 113 aaPredicted RBP15.33■□□□□ 0.04
SGMS1-210ENST00000619438 DNAJC30Q96LL9 226 aa15.33■□□□□ 0.04
SGMS1-210ENST00000619438 IGHV3-53P01767 116 aa15.32■□□□□ 0.04
SGMS1-210ENST00000619438 UBE2V1Q13404 147 aa15.32■□□□□ 0.04
SGMS1-210ENST00000619438 TAL2Q16559 108 aa15.32■□□□□ 0.04
SGMS1-210ENST00000619438 MAPKAPK5-AS1Q8N8E1 139 aa15.32■□□□□ 0.04
SGMS1-210ENST00000619438 TNFRSF18Q9Y5U5 241 aa15.32■□□□□ 0.04
SGMS1-210ENST00000619438 TRAV8-6A0A0B4J262 113 aa15.31■□□□□ 0.04
SGMS1-210ENST00000619438 H3BRM9 83 aa15.31■□□□□ 0.04
SGMS1-210ENST00000619438 PYGO1Q9Y3Y4 419 aa15.31■□□□□ 0.04
SGMS1-210ENST00000619438 NACAE9PAV3 2078 aa15.3■□□□□ 0.04
SGMS1-210ENST00000619438 IGHV3-73A0A0B4J1V6 119 aa15.3■□□□□ 0.04
SGMS1-210ENST00000619438 AZU1P20160 251 aa15.3■□□□□ 0.04
SGMS1-210ENST00000619438 RNASE8Q8TDE3 154 aaKnown RBP15.3■□□□□ 0.04
SGMS1-210ENST00000619438 C11orf86A6NJI1 115 aa15.29■□□□□ 0.04
SGMS1-210ENST00000619438 TM2D2Q9BX73 214 aa15.29■□□□□ 0.04
SGMS1-210ENST00000619438 MRPL16Q9NX20 251 aaKnown RBP15.29■□□□□ 0.04
SGMS1-210ENST00000619438 MYMXA0A1B0GTQ4 84 aa15.28■□□□□ 0.04
SGMS1-210ENST00000619438 CRYBA4P53673 196 aa15.28■□□□□ 0.04
SGMS1-210ENST00000619438 Q6ZSN1 163 aa15.28■□□□□ 0.04
SGMS1-210ENST00000619438 NFE4Q86UQ8 179 aa15.28■□□□□ 0.04
SGMS1-210ENST00000619438 DEFB104AQ8WTQ1 72 aa15.28■□□□□ 0.04
SGMS1-210ENST00000619438 TMEM263Q8WUH6 116 aaKnown RBP15.28■□□□□ 0.04
SGMS1-210ENST00000619438 STARD9Q9P2P6 4700 aa15.28■□□□□ 0.04
SGMS1-210ENST00000619438 DEFB4AO15263 64 aa15.28■□□□□ 0.04
SGMS1-210ENST00000619438 HERVK_113P61574 105 aa15.28■□□□□ 0.04
SGMS1-210ENST00000619438 CSNK1G2-AS1Q8NCQ2 148 aa15.28■□□□□ 0.04
SGMS1-210ENST00000619438 PRADC1Q9BSG0 188 aa15.28■□□□□ 0.04
SGMS1-210ENST00000619438 RYR3Q15413 4870 aa15.26■□□□□ 0.03
SGMS1-210ENST00000619438 CCL25O15444 150 aa15.25■□□□□ 0.03
SGMS1-210ENST00000619438 MIFP14174 115 aa15.25■□□□□ 0.03
SGMS1-210ENST00000619438 PTTG1IPP53801 180 aa15.25■□□□□ 0.03
SGMS1-210ENST00000619438 VAMP3Q15836 100 aa15.25■□□□□ 0.03
SGMS1-210ENST00000619438 CEND1Q8N111 149 aa15.25■□□□□ 0.03
SGMS1-210ENST00000619438 IGLV4-3A0A075B6K6 122 aa15.25■□□□□ 0.03
SGMS1-210ENST00000619438 IGHV3OR16-12A0A075B7B8 117 aa15.25■□□□□ 0.03
SGMS1-210ENST00000619438 C9orf118A6NHY6 69 aa15.24■□□□□ 0.03
SGMS1-210ENST00000619438 DAZ2Q13117 558 aaKnown RBP15.24■□□□□ 0.03
SGMS1-210ENST00000619438 ZNRF2Q8NHG8 242 aa15.24■□□□□ 0.03
SGMS1-210ENST00000619438 C11orf45Q8TAV5 145 aa15.24■□□□□ 0.03
SGMS1-210ENST00000619438 C11orf68Q9H3H3 251 aaKnown RBP15.24■□□□□ 0.03
SGMS1-210ENST00000619438 IGHV4-28A0A0C4DH34 117 aa15.23■□□□□ 0.03
SGMS1-210ENST00000619438 GCSHP23434 173 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms