RNA–Protein interactions for RNA: ENST00000618375.1

SMC5-204, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 5

Gene SMC5, Length 223 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-204ENST00000618375 LENEPQ9Y5L5 61 aa2.49□□□□□ -2.01
SMC5-204ENST00000618375 USF3Q68DE3 2245 aa2.49□□□□□ -2.01
SMC5-204ENST00000618375 ABCA7Q8IZY2 2146 aa2.48□□□□□ -2.01
SMC5-204ENST00000618375 IGKV3D-15A0A087WSY6 115 aa2.48□□□□□ -2.01
SMC5-204ENST00000618375 IGKV2-40A0A087WW87 121 aaPredicted RBP2.48□□□□□ -2.01
SMC5-204ENST00000618375 A0A087WZ39 114 aa2.48□□□□□ -2.01
SMC5-204ENST00000618375 A0A087X002 238 aa2.48□□□□□ -2.01
SMC5-204ENST00000618375 IGKV3D-20A0A0C4DH25 116 aa2.48□□□□□ -2.01
SMC5-204ENST00000618375 IGKV2D-40P01614 121 aaPredicted RBP2.48□□□□□ -2.01
SMC5-204ENST00000618375 CGB3P0DN86 165 aa2.48□□□□□ -2.01
SMC5-204ENST00000618375 CGB7P0DN87 165 aa2.48□□□□□ -2.01
SMC5-204ENST00000618375 Q5VV11 94 aa2.48□□□□□ -2.01
SMC5-204ENST00000618375 CLEC19AQ6UXS0 136 aa2.48□□□□□ -2.01
SMC5-204ENST00000618375 Q75L30 129 aa2.48□□□□□ -2.01
SMC5-204ENST00000618375 GPHB5Q86YW7 130 aa2.48□□□□□ -2.01
SMC5-204ENST00000618375 Q8N9P0 234 aaPredicted RBP2.48□□□□□ -2.01
SMC5-204ENST00000618375 C9orf106Q8NAJ2 232 aa2.48□□□□□ -2.01
SMC5-204ENST00000618375 ZNF625Q96I27 306 aaPredicted RBP2.48□□□□□ -2.01
SMC5-204ENST00000618375 FAM218AQ96MZ4 157 aa2.48□□□□□ -2.01
SMC5-204ENST00000618375 LIMD2Q9BT23 127 aa2.48□□□□□ -2.01
SMC5-204ENST00000618375 DEFB126Q9BYW3 111 aa2.48□□□□□ -2.01
SMC5-204ENST00000618375 CXXC4Q9H2H0 198 aa2.48□□□□□ -2.01
SMC5-204ENST00000618375 ORMDL1Q9P0S3 153 aa2.48□□□□□ -2.01
SMC5-204ENST00000618375 KIF25-AS1Q9Y6Z4 181 aa2.48□□□□□ -2.01
SMC5-204ENST00000618375 FER1L5A0AVI2 2057 aa2.48□□□□□ -2.01
SMC5-204ENST00000618375 IGLV4-3A0A075B6K6 122 aa2.47□□□□□ -2.01
SMC5-204ENST00000618375 IGLV5-45A0A087WSX0 123 aa2.47□□□□□ -2.01
SMC5-204ENST00000618375 LOC110117498A0A087WWA1 95 aa2.47□□□□□ -2.01
SMC5-204ENST00000618375 LCE6AA0A183 80 aa2.47□□□□□ -2.01
SMC5-204ENST00000618375 DEFB108AA8MXU0 73 aa2.47□□□□□ -2.01
SMC5-204ENST00000618375 C16orf90A8MZG2 172 aa2.47□□□□□ -2.01
SMC5-204ENST00000618375 H3BQ85 93 aa2.47□□□□□ -2.01
SMC5-204ENST00000618375 BUB1B-PAK6H3BSN5 160 aa2.47□□□□□ -2.01
SMC5-204ENST00000618375 GNRH2O43555 120 aa2.47□□□□□ -2.01
SMC5-204ENST00000618375 CRPP02741 224 aa2.47□□□□□ -2.01
SMC5-204ENST00000618375 PDE6GP18545 87 aa2.47□□□□□ -2.01
SMC5-204ENST00000618375 TFF2Q03403 129 aa2.47□□□□□ -2.01
SMC5-204ENST00000618375 Q6ZSV7 163 aa2.47□□□□□ -2.01
SMC5-204ENST00000618375 MIR7-3HGQ8N6C7 128 aa2.47□□□□□ -2.01
SMC5-204ENST00000618375 RPL39LQ96EH5 51 aaKnown RBP2.47□□□□□ -2.01
SMC5-204ENST00000618375 SPAG17Q6Q759 2223 aa2.47□□□□□ -2.01
SMC5-204ENST00000618375 NOTCH4Q99466 2003 aa2.47□□□□□ -2.01
SMC5-204ENST00000618375 DOCK7Q96N67 2140 aa2.47□□□□□ -2.01
SMC5-204ENST00000618375 POLEQ07864 2286 aa2.46□□□□□ -2.02
SMC5-204ENST00000618375 TRBV6-8A0A0A6YYG3 113 aa2.46□□□□□ -2.02
SMC5-204ENST00000618375 IGHV3-15A0A0B4J1V0 119 aa2.46□□□□□ -2.02
SMC5-204ENST00000618375 TRAV10A0A0B4J240 114 aa2.46□□□□□ -2.02
SMC5-204ENST00000618375 KLLNB2CW77 178 aa2.46□□□□□ -2.02
SMC5-204ENST00000618375 C5orf67F2Z3F1 127 aa2.46□□□□□ -2.02
SMC5-204ENST00000618375 I3L2K1 104 aa2.46□□□□□ -2.02
SMC5-204ENST00000618375 PSCAO43653 123 aa2.46□□□□□ -2.02
SMC5-204ENST00000618375 IGKV1-17P01599 117 aa2.46□□□□□ -2.02
SMC5-204ENST00000618375 IGKV1-16P04430 117 aa2.46□□□□□ -2.02
SMC5-204ENST00000618375 S100A4P26447 101 aaKnown RBP2.46□□□□□ -2.02
SMC5-204ENST00000618375 RPL27AP46776 148 aaKnown RBP2.46□□□□□ -2.02
SMC5-204ENST00000618375 MP68P56378 58 aa2.46□□□□□ -2.02
SMC5-204ENST00000618375 LINC01547P58512 204 aaPredicted RBP2.46□□□□□ -2.02
SMC5-204ENST00000618375 ELOF1P60002 83 aaKnown RBP2.46□□□□□ -2.02
SMC5-204ENST00000618375 C17orf58Q2M2W7 97 aa2.46□□□□□ -2.02
SMC5-204ENST00000618375 DEFB114Q30KQ6 69 aa2.46□□□□□ -2.02
SMC5-204ENST00000618375 LINC01554Q52M75 96 aa2.46□□□□□ -2.02
SMC5-204ENST00000618375 Q6ZS52 159 aa2.46□□□□□ -2.02
SMC5-204ENST00000618375 FAM19A3Q7Z5A8 133 aa2.46□□□□□ -2.02
SMC5-204ENST00000618375 CCL4L1Q8NHW4 92 aa2.46□□□□□ -2.02
SMC5-204ENST00000618375 Q8TAT8 98 aa2.46□□□□□ -2.02
SMC5-204ENST00000618375 CDC42SE1Q9NRR8 79 aa2.46□□□□□ -2.02
SMC5-204ENST00000618375 UNC13CQ8NB66 2214 aa2.46□□□□□ -2.02
SMC5-204ENST00000618375 KNTC1P50748 2209 aa2.45□□□□□ -2.02
SMC5-204ENST00000618375 GON4LQ3T8J9 2241 aa2.45□□□□□ -2.02
SMC5-204ENST00000618375 NACAE9PAV3 2078 aa2.45□□□□□ -2.02
SMC5-204ENST00000618375 IGLV3-12A0A075B6K2 115 aa2.45□□□□□ -2.02
SMC5-204ENST00000618375 IGLV5-39A0A0G2JS06 123 aa2.45□□□□□ -2.02
SMC5-204ENST00000618375 A0A0J9YXV3 536 aa2.45□□□□□ -2.02
SMC5-204ENST00000618375 LOC101927531A0A1B0GV80 90 aa2.45□□□□□ -2.02
SMC5-204ENST00000618375 SRRM5B3KS81 715 aa2.45□□□□□ -2.02
SMC5-204ENST00000618375 H0Y9J4 135 aa2.45□□□□□ -2.02
SMC5-204ENST00000618375 LY6HO94772 140 aa2.45□□□□□ -2.02
SMC5-204ENST00000618375 IGLV2-23P01705 113 aa2.45□□□□□ -2.02
SMC5-204ENST00000618375 MGPP08493 103 aa2.45□□□□□ -2.02
SMC5-204ENST00000618375 RPL39P62891 51 aaKnown RBP2.45□□□□□ -2.02
SMC5-204ENST00000618375 C9orf129Q5T035 196 aaKnown RBP2.45□□□□□ -2.02
SMC5-204ENST00000618375 C9orf66Q5T8R8 295 aa2.45□□□□□ -2.02
SMC5-204ENST00000618375 HCP5Q6MZN7 132 aa2.45□□□□□ -2.02
SMC5-204ENST00000618375 C9orf47Q6ZRZ4 202 aa2.45□□□□□ -2.02
SMC5-204ENST00000618375 C20orf203Q8NBC4 194 aa2.45□□□□□ -2.02
SMC5-204ENST00000618375 C11orf72Q8NBR9 251 aa2.45□□□□□ -2.02
SMC5-204ENST00000618375 C1orf64Q8NEQ6 169 aa2.45□□□□□ -2.02
SMC5-204ENST00000618375 WFDC9Q8NEX5 89 aa2.45□□□□□ -2.02
SMC5-204ENST00000618375 OCR1Q9BZK8 76 aa2.45□□□□□ -2.02
SMC5-204ENST00000618375 Q9HAA7 133 aa2.45□□□□□ -2.02
SMC5-204ENST00000618375 CCL26Q9Y258 94 aa2.45□□□□□ -2.02
SMC5-204ENST00000618375 PRRC2AP48634 2157 aaKnown RBP2.44□□□□□ -2.02
SMC5-204ENST00000618375 IGHV3-64A0A075B6Q5 118 aa2.44□□□□□ -2.02
SMC5-204ENST00000618375 A0A087WYN8 130 aa2.44□□□□□ -2.02
SMC5-204ENST00000618375 TRAV21A0A0B4J279 112 aa2.44□□□□□ -2.02
SMC5-204ENST00000618375 IGKV2-29A2NJV5 120 aaPredicted RBP2.44□□□□□ -2.02
SMC5-204ENST00000618375 HCG22E2RYF7 251 aa2.44□□□□□ -2.02
SMC5-204ENST00000618375 C3orf84H3BNL1 204 aa2.44□□□□□ -2.02
SMC5-204ENST00000618375 C19orf84I3L1E1 186 aa2.44□□□□□ -2.02
SMC5-204ENST00000618375 CCL24O00175 119 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms