RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 LINC00467Q9BRT7 94 aa14.2□□□□□ -0.14
SPAST-203ENST00000615843 NRACQ8N912 160 aa14.19□□□□□ -0.14
SPAST-203ENST00000615843 C20orf173Q96LM9 149 aa14.19□□□□□ -0.14
SPAST-203ENST00000615843 ESM1Q9NQ30 184 aa14.19□□□□□ -0.14
SPAST-203ENST00000615843 SMAD5-AS1Q9Y6J3 95 aa14.19□□□□□ -0.14
SPAST-203ENST00000615843 ODF3BA8MYP8 253 aa14.18□□□□□ -0.14
SPAST-203ENST00000615843 TMEM89A2RUT3 159 aa14.18□□□□□ -0.14
SPAST-203ENST00000615843 A0A1W2PNU3 283 aaPredicted RBP14.18□□□□□ -0.14
SPAST-203ENST00000615843 ENHOQ6UWT2 76 aa14.18□□□□□ -0.14
SPAST-203ENST00000615843 URB1-AS1Q96HZ7 61 aa14.18□□□□□ -0.14
SPAST-203ENST00000615843 ODF3Q96PU9 254 aa14.18□□□□□ -0.14
SPAST-203ENST00000615843 LINC01548A6NM66 108 aa14.18□□□□□ -0.14
SPAST-203ENST00000615843 FAM110AQ9BQ89 295 aa14.17□□□□□ -0.14
SPAST-203ENST00000615843 ZFAND2AQ8N6M9 145 aa14.17□□□□□ -0.14
SPAST-203ENST00000615843 TMEM263Q8WUH6 116 aaKnown RBP14.16□□□□□ -0.14
SPAST-203ENST00000615843 M0QY20 66 aa14.16□□□□□ -0.14
SPAST-203ENST00000615843 SLPIP03973 132 aa14.16□□□□□ -0.14
SPAST-203ENST00000615843 COX7BP24311 80 aa14.16□□□□□ -0.14
SPAST-203ENST00000615843 MPLKIPQ8TAP9 179 aa14.16□□□□□ -0.14
SPAST-203ENST00000615843 NDUFB1O75438 58 aa14.16□□□□□ -0.14
SPAST-203ENST00000615843 PIK3CD-AS1Q5SR53 167 aa14.15□□□□□ -0.14
SPAST-203ENST00000615843 C10orf105Q8TEF2 133 aa14.15□□□□□ -0.14
SPAST-203ENST00000615843 TMEM131Q92545 1883 aa14.15□□□□□ -0.14
SPAST-203ENST00000615843 SERP2Q8N6R1 65 aa14.15□□□□□ -0.14
SPAST-203ENST00000615843 ZFAND3Q9H8U3 227 aa14.15□□□□□ -0.14
SPAST-203ENST00000615843 LST1O00453 97 aa14.15□□□□□ -0.14
SPAST-203ENST00000615843 SPART-AS1P0CW21 52 aa14.15□□□□□ -0.14
SPAST-203ENST00000615843 TRBV27A0A0K0K1C4 114 aa14.14□□□□□ -0.15
SPAST-203ENST00000615843 BPY2O14599 106 aa14.14□□□□□ -0.15
SPAST-203ENST00000615843 Q6ZS46 218 aa14.13□□□□□ -0.15
SPAST-203ENST00000615843 GAS8-AS1O95177 125 aa14.13□□□□□ -0.15
SPAST-203ENST00000615843 A6NDX4 124 aa14.12□□□□□ -0.15
SPAST-203ENST00000615843 WNK1Q9H4A3 2382 aa14.12□□□□□ -0.15
SPAST-203ENST00000615843 CLPSL1A2RUU4 121 aa14.12□□□□□ -0.15
SPAST-203ENST00000615843 CHKB-CPT1BH3BT56 60 aa14.12□□□□□ -0.15
SPAST-203ENST00000615843 COX7CP15954 63 aa14.12□□□□□ -0.15
SPAST-203ENST00000615843 USP17L23D6RBM5 183 aa14.12□□□□□ -0.15
SPAST-203ENST00000615843 NDUFC2-KCTD14E9PQ53 114 aa14.12□□□□□ -0.15
SPAST-203ENST00000615843 IGF2-ASQ6U949 168 aa14.12□□□□□ -0.15
SPAST-203ENST00000615843 MAP6D1Q9H9H5 199 aa14.12□□□□□ -0.15
SPAST-203ENST00000615843 TIRAPP58753 221 aa14.11□□□□□ -0.15
SPAST-203ENST00000615843 PKIGQ9Y2B9 76 aa14.11□□□□□ -0.15
SPAST-203ENST00000615843 ANKHD1Q8IWZ3 2542 aaKnown RBP14.11□□□□□ -0.15
SPAST-203ENST00000615843 TRBV6-5A0A0K0K1A5 114 aa14.11□□□□□ -0.15
SPAST-203ENST00000615843 ADORA2A-AS1P86434 159 aa14.11□□□□□ -0.15
SPAST-203ENST00000615843 KLK12Q9UKR0 248 aa14.11□□□□□ -0.15
SPAST-203ENST00000615843 TIMM17BO60830 172 aa14.1□□□□□ -0.15
SPAST-203ENST00000615843 C11orf21Q9P2W6 132 aa14.1□□□□□ -0.15
SPAST-203ENST00000615843 A8MZ25 164 aa14.1□□□□□ -0.15
SPAST-203ENST00000615843 DAZAP2Q15038 168 aaPredicted RBP14.1□□□□□ -0.15
SPAST-203ENST00000615843 Q6Q795 121 aa14.1□□□□□ -0.15
SPAST-203ENST00000615843 Q6ZTI0 123 aa14.1□□□□□ -0.15
SPAST-203ENST00000615843 PYGO1Q9Y3Y4 419 aa14.1□□□□□ -0.15
SPAST-203ENST00000615843 KIAA1549Q9HCM3 1950 aa14.1□□□□□ -0.15
SPAST-203ENST00000615843 A0A0U1RQV1 116 aa14.09□□□□□ -0.15
SPAST-203ENST00000615843 ZMAT4Q9H898 229 aa14.09□□□□□ -0.15
SPAST-203ENST00000615843 IBA57-AS1B1ANH7 110 aa14.09□□□□□ -0.15
SPAST-203ENST00000615843 K7EQG2 157 aa14.09□□□□□ -0.15
SPAST-203ENST00000615843 SCXQ7RTU7 201 aa14.09□□□□□ -0.15
SPAST-203ENST00000615843 SVIPQ8NHG7 77 aa14.09□□□□□ -0.15
SPAST-203ENST00000615843 H7C423 109 aa14.08□□□□□ -0.16
SPAST-203ENST00000615843 FAM240AA0A1B0GVK7 77 aa14.08□□□□□ -0.16
SPAST-203ENST00000615843 C4orf3Q8WVX3 66 aa14.08□□□□□ -0.16
SPAST-203ENST00000615843 PRO0255Q9UI72 69 aa14.08□□□□□ -0.16
SPAST-203ENST00000615843 LY6LH3BQJ8 138 aa14.08□□□□□ -0.16
SPAST-203ENST00000615843 PTPRQQ9UMZ3 2332 aa14.07□□□□□ -0.16
SPAST-203ENST00000615843 PRR14LQ5THK1 2151 aa14.07□□□□□ -0.16
SPAST-203ENST00000615843 TSHBP01222 138 aa14.06□□□□□ -0.16
SPAST-203ENST00000615843 LRRC75A-AS1Q8N1F1 130 aa14.06□□□□□ -0.16
SPAST-203ENST00000615843 C9orf66Q5T8R8 295 aa14.06□□□□□ -0.16
SPAST-203ENST00000615843 RNASE3P12724 160 aaKnown RBP14.06□□□□□ -0.16
SPAST-203ENST00000615843 SPTSSBQ8NFR3 76 aa14.05□□□□□ -0.16
SPAST-203ENST00000615843 CNFNQ9BYD5 112 aa14.05□□□□□ -0.16
SPAST-203ENST00000615843 SPG11Q96JI7 2443 aa14.05□□□□□ -0.16
SPAST-203ENST00000615843 COL4A4P53420 1690 aaPredicted RBP14.05□□□□□ -0.16
SPAST-203ENST00000615843 FAM222AQ5U5X8 452 aa14.05□□□□□ -0.16
SPAST-203ENST00000615843 C22orf34Q6ZV56 151 aa14.05□□□□□ -0.16
SPAST-203ENST00000615843 NUP210LQ5VU65 1888 aa14.04□□□□□ -0.16
SPAST-203ENST00000615843 PCDH15Q96QU1 1955 aa14.04□□□□□ -0.16
SPAST-203ENST00000615843 POLR2KP53803 58 aaKnown RBP14.04□□□□□ -0.16
SPAST-203ENST00000615843 EBI3Q14213 229 aa14.04□□□□□ -0.16
SPAST-203ENST00000615843 LINC00694P0DN24 101 aa14.04□□□□□ -0.16
SPAST-203ENST00000615843 PRR9Q5T870 116 aa14.04□□□□□ -0.16
SPAST-203ENST00000615843 HCFC1P51610 2035 aa14.04□□□□□ -0.16
SPAST-203ENST00000615843 PROK1P58294 105 aa14.03□□□□□ -0.16
SPAST-203ENST00000615843 FBXL19-AS1Q494R0 122 aa14.03□□□□□ -0.16
SPAST-203ENST00000615843 FAM208BQ5VWN6 2430 aa14.03□□□□□ -0.16
SPAST-203ENST00000615843 DEFB4AO15263 64 aa14.03□□□□□ -0.16
SPAST-203ENST00000615843 LINC00269Q8N2A0 174 aa14.02□□□□□ -0.16
SPAST-203ENST00000615843 TANC2Q9HCD6 1990 aa14.02□□□□□ -0.17
SPAST-203ENST00000615843 LMO4P61968 165 aa14.01□□□□□ -0.17
SPAST-203ENST00000615843 DEFB135Q30KP9 77 aa14.01□□□□□ -0.17
SPAST-203ENST00000615843 WFDC11Q8NEX6 87 aa14.01□□□□□ -0.17
SPAST-203ENST00000615843 V9GYY9 64 aa14.01□□□□□ -0.17
SPAST-203ENST00000615843 C2orf16Q68DN1 1984 aa14.01□□□□□ -0.17
SPAST-203ENST00000615843 M0QXV9 152 aa14□□□□□ -0.17
SPAST-203ENST00000615843 NDUFC1O43677 76 aa14□□□□□ -0.17
SPAST-203ENST00000615843 ATP5EP56381 51 aaPredicted RBP14□□□□□ -0.17
SPAST-203ENST00000615843 REG3AQ06141 175 aa14□□□□□ -0.17
SPAST-203ENST00000615843 SNURFQ9Y675 71 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms