RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 IGHV3OR16-8A0A075B7F1 116 aa16.36■□□□□ 0.21
POLR2J3-220ENST00000613744 IGHV7-81A0A0B4J1V7 117 aa16.36■□□□□ 0.21
POLR2J3-220ENST00000613744 VCYO14598 125 aa16.36■□□□□ 0.21
POLR2J3-220ENST00000613744 POLR2KP53803 58 aaKnown RBP16.36■□□□□ 0.21
POLR2J3-220ENST00000613744 ZFAND2AQ8N6M9 145 aa16.35■□□□□ 0.21
POLR2J3-220ENST00000613744 SPANXDQ9BXN6 97 aa16.35■□□□□ 0.21
POLR2J3-220ENST00000613744 TMEM126AQ9H061 195 aa16.35■□□□□ 0.21
POLR2J3-220ENST00000613744 SDHAF1A6NFY7 115 aa16.34■□□□□ 0.21
POLR2J3-220ENST00000613744 ARL3P36405 182 aa16.34■□□□□ 0.21
POLR2J3-220ENST00000613744 IGHV3-35A0A0C4DH35 117 aa16.34■□□□□ 0.21
POLR2J3-220ENST00000613744 H3BT86 120 aa16.34■□□□□ 0.21
POLR2J3-220ENST00000613744 EIF4EBP3O60516 100 aaPredicted RBP16.34■□□□□ 0.21
POLR2J3-220ENST00000613744 FAM159AQ6UWV7 190 aa16.34■□□□□ 0.21
POLR2J3-220ENST00000613744 Q6ZQT7 251 aa16.34■□□□□ 0.21
POLR2J3-220ENST00000613744 OVOL1O14753 267 aa16.33■□□□□ 0.21
POLR2J3-220ENST00000613744 HILS1P60008 231 aa16.33■□□□□ 0.21
POLR2J3-220ENST00000613744 BLCAPP62952 87 aa16.33■□□□□ 0.21
POLR2J3-220ENST00000613744 ZNRF2Q8NHG8 242 aa16.33■□□□□ 0.21
POLR2J3-220ENST00000613744 TRAV2A0A0B4J234 112 aa16.33■□□□□ 0.2
POLR2J3-220ENST00000613744 C16orf92Q96LL3 132 aa16.33■□□□□ 0.2
POLR2J3-220ENST00000613744 APRG1Q8IVJ8 170 aa16.32■□□□□ 0.2
POLR2J3-220ENST00000613744 KIF25-AS1Q9Y6Z4 181 aa16.32■□□□□ 0.2
POLR2J3-220ENST00000613744 IGHV3-66A0A0C4DH42 116 aa16.31■□□□□ 0.2
POLR2J3-220ENST00000613744 TMEM223A0PJW6 202 aa16.31■□□□□ 0.2
POLR2J3-220ENST00000613744 DEFB121Q5J5C9 76 aa16.31■□□□□ 0.2
POLR2J3-220ENST00000613744 EEF1AKMT3Q96AZ1 226 aa16.31■□□□□ 0.2
POLR2J3-220ENST00000613744 TNFRSF18Q9Y5U5 241 aa16.31■□□□□ 0.2
POLR2J3-220ENST00000613744 TRBV7-1A0A0A6YYK4 115 aa16.31■□□□□ 0.2
POLR2J3-220ENST00000613744 M0R2P5 195 aa16.31■□□□□ 0.2
POLR2J3-220ENST00000613744 ANXA2RQ3ZCQ2 193 aa16.31■□□□□ 0.2
POLR2J3-220ENST00000613744 LINC00315P59091 139 aa16.3■□□□□ 0.2
POLR2J3-220ENST00000613744 MUSTN1Q8IVN3 82 aa16.3■□□□□ 0.2
POLR2J3-220ENST00000613744 TMEM86BQ8N661 226 aa16.3■□□□□ 0.2
POLR2J3-220ENST00000613744 CCDC140Q96MF4 163 aa16.3■□□□□ 0.2
POLR2J3-220ENST00000613744 JMJD1CQ15652 2540 aa16.3■□□□□ 0.2
POLR2J3-220ENST00000613744 ATP6V0E1O15342 81 aa16.3■□□□□ 0.2
POLR2J3-220ENST00000613744 EMP1P54849 157 aa16.3■□□□□ 0.2
POLR2J3-220ENST00000613744 Q1RN00 199 aa16.3■□□□□ 0.2
POLR2J3-220ENST00000613744 TRBV6-5A0A0K0K1A5 114 aa16.29■□□□□ 0.2
POLR2J3-220ENST00000613744 TRBV7-7A0A0K0K1E9 115 aa16.29■□□□□ 0.2
POLR2J3-220ENST00000613744 TEX49A0A1B0GTD5 131 aa16.29■□□□□ 0.2
POLR2J3-220ENST00000613744 ECSCRQ19T08 205 aa16.29■□□□□ 0.2
POLR2J3-220ENST00000613744 FAM19A4Q96LR4 140 aa16.29■□□□□ 0.2
POLR2J3-220ENST00000613744 LINC00527Q9UJ94 153 aa16.29■□□□□ 0.2
POLR2J3-220ENST00000613744 SETD2Q9BYW2 2564 aaPredicted RBP16.28■□□□□ 0.2
POLR2J3-220ENST00000613744 MEIG1Q5JSS6 88 aa16.28■□□□□ 0.2
POLR2J3-220ENST00000613744 TRBV27A0A0K0K1C4 114 aa16.28■□□□□ 0.2
POLR2J3-220ENST00000613744 RNASE3P12724 160 aaKnown RBP16.28■□□□□ 0.2
POLR2J3-220ENST00000613744 CLEC19AQ6UXS0 136 aa16.28■□□□□ 0.2
POLR2J3-220ENST00000613744 C2orf82Q6UX34 121 aa16.27■□□□□ 0.2
POLR2J3-220ENST00000613744 RNASE1P07998 156 aaKnown RBP16.26■□□□□ 0.19
POLR2J3-220ENST00000613744 RHOHQ15669 191 aa16.26■□□□□ 0.19
POLR2J3-220ENST00000613744 G3V318 75 aa16.25■□□□□ 0.19
POLR2J3-220ENST00000613744 RPL39P62891 51 aaKnown RBP16.25■□□□□ 0.19
POLR2J3-220ENST00000613744 C20orf173Q96LM9 149 aa16.25■□□□□ 0.19
POLR2J3-220ENST00000613744 IMUPQ9GZP8 106 aa16.25■□□□□ 0.19
POLR2J3-220ENST00000613744 TRIAP1O43715 76 aa16.25■□□□□ 0.19
POLR2J3-220ENST00000613744 COX6CP09669 75 aa16.25■□□□□ 0.19
POLR2J3-220ENST00000613744 NSUN5P1Q3KNT7 163 aa16.25■□□□□ 0.19
POLR2J3-220ENST00000613744 IGHV3OR16-13A0A075B7E8 117 aa16.24■□□□□ 0.19
POLR2J3-220ENST00000613744 IGHV3-74A0A0B4J1X5 117 aa16.24■□□□□ 0.19
POLR2J3-220ENST00000613744 H7C2G1 150 aa16.24■□□□□ 0.19
POLR2J3-220ENST00000613744 IGF1P05019 195 aa16.24■□□□□ 0.19
POLR2J3-220ENST00000613744 ELANEP08246 267 aa16.24■□□□□ 0.19
POLR2J3-220ENST00000613744 SUMO4Q6EEV6 95 aa16.23■□□□□ 0.19
POLR2J3-220ENST00000613744 ZNF702PQ9H963 129 aa16.23■□□□□ 0.19
POLR2J3-220ENST00000613744 H7C423 109 aa16.22■□□□□ 0.19
POLR2J3-220ENST00000613744 ZNF22P17026 224 aaPredicted RBP16.22■□□□□ 0.19
POLR2J3-220ENST00000613744 IGHG2P01859 326 aa16.22■□□□□ 0.19
POLR2J3-220ENST00000613744 Q6ZSV7 163 aa16.22■□□□□ 0.19
POLR2J3-220ENST00000613744 ICOSQ9Y6W8 199 aa16.22■□□□□ 0.19
POLR2J3-220ENST00000613744 A0A0J9YXY3 114 aa16.21■□□□□ 0.19
POLR2J3-220ENST00000613744 SOCS3O14543 225 aa16.21■□□□□ 0.19
POLR2J3-220ENST00000613744 ACYP1P07311 99 aa16.21■□□□□ 0.19
POLR2J3-220ENST00000613744 PRIMA1Q86XR5 153 aa16.21■□□□□ 0.19
POLR2J3-220ENST00000613744 IGHV3-49A0A0A0MS15 119 aa16.2■□□□□ 0.18
POLR2J3-220ENST00000613744 GNRH2O43555 120 aa16.2■□□□□ 0.18
POLR2J3-220ENST00000613744 SPRY2O43597 315 aa16.2■□□□□ 0.18
POLR2J3-220ENST00000613744 TMEM101Q96IK0 257 aa16.2■□□□□ 0.18
POLR2J3-220ENST00000613744 SPANXCQ9NY87 97 aa16.2■□□□□ 0.18
POLR2J3-220ENST00000613744 TRAV41A0A0B4J266 112 aa16.2■□□□□ 0.18
POLR2J3-220ENST00000613744 J3KRW8 73 aa16.19■□□□□ 0.18
POLR2J3-220ENST00000613744 RNASE4P34096 147 aaKnown RBP16.19■□□□□ 0.18
POLR2J3-220ENST00000613744 LINC01587Q99440 93 aa16.19■□□□□ 0.18
POLR2J3-220ENST00000613744 C2CD3Q4AC94 2353 aa16.18■□□□□ 0.18
POLR2J3-220ENST00000613744 ZNF56Q15929 161 aa16.17■□□□□ 0.18
POLR2J3-220ENST00000613744 LST1O00453 97 aa16.17■□□□□ 0.18
POLR2J3-220ENST00000613744 LITAFQ99732 161 aa16.17■□□□□ 0.18
POLR2J3-220ENST00000613744 C10orf99Q6UWK7 81 aa16.15■□□□□ 0.18
POLR2J3-220ENST00000613744 FAM223BA6NKX1 122 aa16.15■□□□□ 0.18
POLR2J3-220ENST00000613744 FAM223AQ8IWN6 122 aa16.15■□□□□ 0.18
POLR2J3-220ENST00000613744 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.15■□□□□ 0.18
POLR2J3-220ENST00000613744 Q8N2B8 174 aa16.14■□□□□ 0.17
POLR2J3-220ENST00000613744 BRI3O95415 125 aa16.14■□□□□ 0.17
POLR2J3-220ENST00000613744 ATP5G1P05496 136 aa16.14■□□□□ 0.17
POLR2J3-220ENST00000613744 F5H697 171 aa16.13■□□□□ 0.17
POLR2J3-220ENST00000613744 C19orf54Q5BKX5 351 aa16.13■□□□□ 0.17
POLR2J3-220ENST00000613744 HIST2H2BDQ6DRA6 164 aa16.13■□□□□ 0.17
POLR2J3-220ENST00000613744 C20orf203Q8NBC4 194 aa16.13■□□□□ 0.17
POLR2J3-220ENST00000613744 LINC01006Q8NI28 216 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms