RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 NDUFA7O95182 113 aa10.79□□□□□ -0.68
CDH1-213ENST00000612417 GAGE5Q13069 117 aa10.79□□□□□ -0.68
CDH1-213ENST00000612417 GAGE6Q13070 117 aa10.79□□□□□ -0.68
CDH1-213ENST00000612417 SS18L2Q9UHA2 77 aa10.79□□□□□ -0.68
CDH1-213ENST00000612417 F8W1H4 67 aa10.78□□□□□ -0.68
CDH1-213ENST00000612417 SCGB1D4Q6XE38 83 aa10.78□□□□□ -0.68
CDH1-213ENST00000612417 NFE4Q86UQ8 179 aa10.78□□□□□ -0.68
CDH1-213ENST00000612417 PLEKHB2Q96CS7 222 aa10.78□□□□□ -0.68
CDH1-213ENST00000612417 UBE2D1P51668 147 aa10.78□□□□□ -0.68
CDH1-213ENST00000612417 FN1P02751 2386 aaKnown RBP10.77□□□□□ -0.68
CDH1-213ENST00000612417 CCL24O00175 119 aa10.77□□□□□ -0.69
CDH1-213ENST00000612417 ZNRF2Q8NHG8 242 aa10.77□□□□□ -0.69
CDH1-213ENST00000612417 ERG28Q9UKR5 140 aa10.77□□□□□ -0.69
CDH1-213ENST00000612417 TRAV2A0A0B4J234 112 aa10.77□□□□□ -0.69
CDH1-213ENST00000612417 A0A0J9YY99 117 aa10.77□□□□□ -0.69
CDH1-213ENST00000612417 EMP1P54849 157 aa10.77□□□□□ -0.69
CDH1-213ENST00000612417 DYNLRB2Q8TF09 96 aa10.77□□□□□ -0.69
CDH1-213ENST00000612417 SPANXB1Q9NS25 103 aaPredicted RBP10.77□□□□□ -0.69
CDH1-213ENST00000612417 TEX48A0A1B0GUV7 120 aa10.76□□□□□ -0.69
CDH1-213ENST00000612417 I3L3M4 83 aa10.76□□□□□ -0.69
CDH1-213ENST00000612417 P0DMU3 169 aa10.76□□□□□ -0.69
CDH1-213ENST00000612417 FAM231AP0DMU4 169 aa10.76□□□□□ -0.69
CDH1-213ENST00000612417 FAM231CP0DMU5 169 aa10.76□□□□□ -0.69
CDH1-213ENST00000612417 RPL24P83731 157 aaKnown RBP10.76□□□□□ -0.69
CDH1-213ENST00000612417 C20orf203Q8NBC4 194 aa10.76□□□□□ -0.69
CDH1-213ENST00000612417 DEFB104AQ8WTQ1 72 aa10.76□□□□□ -0.69
CDH1-213ENST00000612417 RBMY1A1P0DJD3 496 aaKnown RBP10.75□□□□□ -0.69
CDH1-213ENST00000612417 RBMY1CP0DJD4 496 aa10.75□□□□□ -0.69
CDH1-213ENST00000612417 SRSF9Q13242 221 aaKnown RBP eCLIP10.75□□□□□ -0.69
CDH1-213ENST00000612417 RBMY1FQ15415 496 aaKnown RBP10.75□□□□□ -0.69
CDH1-213ENST00000612417 TSPEAR-AS2P59090 65 aa10.75□□□□□ -0.69
CDH1-213ENST00000612417 PIK3CD-AS1Q5SR53 167 aa10.75□□□□□ -0.69
CDH1-213ENST00000612417 TMEM170BQ5T4T1 132 aa10.75□□□□□ -0.69
CDH1-213ENST00000612417 AMELXQ99217 191 aa10.75□□□□□ -0.69
CDH1-213ENST00000612417 SPAG8Q99932 426 aaPredicted RBP10.75□□□□□ -0.69
CDH1-213ENST00000612417 NACAE9PAV3 2078 aa10.74□□□□□ -0.69
CDH1-213ENST00000612417 PROK1P58294 105 aa10.74□□□□□ -0.69
CDH1-213ENST00000612417 H3BMG7 143 aa10.73□□□□□ -0.69
CDH1-213ENST00000612417 CRLF1O75462 422 aa10.73□□□□□ -0.69
CDH1-213ENST00000612417 SLC25A29Q8N8R3 303 aa10.73□□□□□ -0.69
CDH1-213ENST00000612417 SPANXA1Q9NS26 97 aa10.73□□□□□ -0.69
CDH1-213ENST00000612417 F8P00451 2351 aa10.73□□□□□ -0.69
CDH1-213ENST00000612417 C2CD3Q4AC94 2353 aa10.73□□□□□ -0.69
CDH1-213ENST00000612417 H3BMM0 161 aa10.73□□□□□ -0.69
CDH1-213ENST00000612417 J3QQQ9 107 aa10.73□□□□□ -0.69
CDH1-213ENST00000612417 FHL3Q13643 280 aa10.73□□□□□ -0.69
CDH1-213ENST00000612417 KNCNA6PVL3 124 aa10.72□□□□□ -0.69
CDH1-213ENST00000612417 DEFB131AP59861 70 aa10.72□□□□□ -0.69
CDH1-213ENST00000612417 PTH2Q96A98 100 aa10.72□□□□□ -0.69
CDH1-213ENST00000612417 PRO0461Q9UI25 63 aa10.72□□□□□ -0.69
CDH1-213ENST00000612417 TMEM223A0PJW6 202 aa10.72□□□□□ -0.69
CDH1-213ENST00000612417 IGHV3-30P01768 117 aa10.72□□□□□ -0.69
CDH1-213ENST00000612417 IGHV3-30-5P0DP03 117 aa10.72□□□□□ -0.69
CDH1-213ENST00000612417 WFDC2Q14508 124 aa10.72□□□□□ -0.69
CDH1-213ENST00000612417 TMEM61Q8N0U2 210 aa10.72□□□□□ -0.69
CDH1-213ENST00000612417 PYGO1Q9Y3Y4 419 aa10.72□□□□□ -0.69
CDH1-213ENST00000612417 BAHCC1Q9P281 2608 aa10.71□□□□□ -0.69
CDH1-213ENST00000612417 IGLV4-3A0A075B6K6 122 aa10.71□□□□□ -0.69
CDH1-213ENST00000612417 DEFB114Q30KQ6 69 aa10.71□□□□□ -0.69
CDH1-213ENST00000612417 GAGE13Q4V321 117 aa10.71□□□□□ -0.69
CDH1-213ENST00000612417 OPRPNQ99935 248 aaPredicted RBP10.71□□□□□ -0.69
CDH1-213ENST00000612417 NIPBLQ6KC79 2804 aaeCLIP10.71□□□□□ -0.7
CDH1-213ENST00000612417 RBMY1BA6NDE4 496 aaKnown RBP10.7□□□□□ -0.7
CDH1-213ENST00000612417 RBMY1EA6NEQ0 496 aaKnown RBP10.7□□□□□ -0.7
CDH1-213ENST00000612417 A8MWV9 139 aa10.7□□□□□ -0.7
CDH1-213ENST00000612417 LEPROTO15243 131 aa10.7□□□□□ -0.7
CDH1-213ENST00000612417 RBMY1DP0C7P1 496 aaKnown RBP10.7□□□□□ -0.7
CDH1-213ENST00000612417 M0R2P5 195 aa10.7□□□□□ -0.7
CDH1-213ENST00000612417 LGALS3P17931 250 aaKnown RBP10.7□□□□□ -0.7
CDH1-213ENST00000612417 NDUFA11Q86Y39 141 aa10.7□□□□□ -0.7
CDH1-213ENST00000612417 CITED1Q99966 193 aa10.7□□□□□ -0.7
CDH1-213ENST00000612417 LINC00467Q9BRT7 94 aa10.7□□□□□ -0.7
CDH1-213ENST00000612417 RHODO00212 210 aa10.69□□□□□ -0.7
CDH1-213ENST00000612417 ZNF22P17026 224 aaPredicted RBP10.69□□□□□ -0.7
CDH1-213ENST00000612417 UBE2D3P61077 147 aa10.69□□□□□ -0.7
CDH1-213ENST00000612417 UBE2D2P62837 147 aa10.69□□□□□ -0.7
CDH1-213ENST00000612417 RNF183Q96D59 192 aa10.69□□□□□ -0.7
CDH1-213ENST00000612417 ZNF415Q09FC8 603 aa10.69□□□□□ -0.7
CDH1-213ENST00000612417 VCX2Q9H322 139 aa10.69□□□□□ -0.7
CDH1-213ENST00000612417 JMJD1CQ15652 2540 aa10.68□□□□□ -0.7
CDH1-213ENST00000612417 ADARB2-AS1A8MUL3 147 aa10.67□□□□□ -0.7
CDH1-213ENST00000612417 KRTAP10-3P60369 221 aa10.67□□□□□ -0.7
CDH1-213ENST00000612417 LYRM7Q5U5X0 104 aa10.67□□□□□ -0.7
CDH1-213ENST00000612417 SMIM20Q8N5G0 67 aa10.67□□□□□ -0.7
CDH1-213ENST00000612417 MAP6D1Q9H9H5 199 aa10.67□□□□□ -0.7
CDH1-213ENST00000612417 CFC1BP0CG36 223 aa10.67□□□□□ -0.7
CDH1-213ENST00000612417 CFC1P0CG37 223 aa10.67□□□□□ -0.7
CDH1-213ENST00000612417 FAM104AQ969W3 186 aa10.67□□□□□ -0.7
CDH1-213ENST00000612417 APOMO95445 188 aa10.66□□□□□ -0.7
CDH1-213ENST00000612417 HTN1P15515 57 aa10.66□□□□□ -0.7
CDH1-213ENST00000612417 MRPS36P82909 103 aaKnown RBP10.66□□□□□ -0.7
CDH1-213ENST00000612417 ETDBQ3ZM63 59 aa10.66□□□□□ -0.7
CDH1-213ENST00000612417 A0A0J9YXV3 536 aa10.65□□□□□ -0.7
CDH1-213ENST00000612417 CFAP126Q5VTH2 177 aa10.65□□□□□ -0.7
CDH1-213ENST00000612417 C11orf72Q8NBR9 251 aa10.65□□□□□ -0.7
CDH1-213ENST00000612417 C5orf47Q569G3 176 aa10.65□□□□□ -0.7
CDH1-213ENST00000612417 SH2D6Q7Z4S9 175 aa10.65□□□□□ -0.7
CDH1-213ENST00000612417 C10orf126Q8N4M7 172 aa10.65□□□□□ -0.7
CDH1-213ENST00000612417 ANAPC13Q9BS18 74 aa10.65□□□□□ -0.7
CDH1-213ENST00000612417 IGHV3-73A0A0B4J1V6 119 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 201.2 ms