RNA–Protein interactions for RNA: ENST00000610470.4

PRKN-208, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene PRKN, Length 531 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-208ENST00000610470 K7EN84 100 aa11.28□□□□□ -0.6
PRKN-208ENST00000610470 SRP19P09132 144 aaKnown RBP11.28□□□□□ -0.6
PRKN-208ENST00000610470 DGAT2L7PQ6IED9 249 aa11.28□□□□□ -0.6
PRKN-208ENST00000610470 TRAV8-4A0A0B4J246 113 aa11.27□□□□□ -0.61
PRKN-208ENST00000610470 UBE2L6O14933 153 aa11.27□□□□□ -0.61
PRKN-208ENST00000610470 COTL1Q14019 142 aa11.27□□□□□ -0.61
PRKN-208ENST00000610470 KRTAP26-1Q6PEX3 210 aa11.27□□□□□ -0.61
PRKN-208ENST00000610470 C20orf203Q8NBC4 194 aa11.27□□□□□ -0.61
PRKN-208ENST00000610470 CIRBP-AS1Q8TBR5 109 aa11.27□□□□□ -0.61
PRKN-208ENST00000610470 PRSS1P07477 247 aa11.26□□□□□ -0.61
PRKN-208ENST00000610470 SMIM15Q7Z3B0 74 aa11.26□□□□□ -0.61
PRKN-208ENST00000610470 DEFB104AQ8WTQ1 72 aa11.26□□□□□ -0.61
PRKN-208ENST00000610470 SMIM7Q9BQ49 75 aa11.26□□□□□ -0.61
PRKN-208ENST00000610470 NDUFS6O75380 124 aaKnown RBP11.25□□□□□ -0.61
PRKN-208ENST00000610470 AMTP48728 403 aa11.25□□□□□ -0.61
PRKN-208ENST00000610470 SRSF3P84103 164 aaKnown RBP11.25□□□□□ -0.61
PRKN-208ENST00000610470 CLRN3Q8NCR9 226 aa11.25□□□□□ -0.61
PRKN-208ENST00000610470 IGLV4-60A0A075B6I1 120 aa11.24□□□□□ -0.61
PRKN-208ENST00000610470 IGLV10-54A0A075B6I4 117 aa11.24□□□□□ -0.61
PRKN-208ENST00000610470 ZNF727A8MUV8 499 aa11.24□□□□□ -0.61
PRKN-208ENST00000610470 C9JQL5 133 aa11.24□□□□□ -0.61
PRKN-208ENST00000610470 J3QL48 77 aa11.24□□□□□ -0.61
PRKN-208ENST00000610470 GATCO43716 136 aaKnown RBP11.24□□□□□ -0.61
PRKN-208ENST00000610470 GATD1Q8NB37 220 aa11.24□□□□□ -0.61
PRKN-208ENST00000610470 GTSF1Q8WW33 167 aa11.24□□□□□ -0.61
PRKN-208ENST00000610470 FAM231DQ6ZW35 169 aa11.23□□□□□ -0.61
PRKN-208ENST00000610470 C9orf163Q8N9P6 203 aa11.23□□□□□ -0.61
PRKN-208ENST00000610470 TRAV26-2A0A0B4J265 109 aa11.22□□□□□ -0.61
PRKN-208ENST00000610470 A8MWL6 223 aa11.22□□□□□ -0.61
PRKN-208ENST00000610470 PEA15Q15121 130 aa11.22□□□□□ -0.61
PRKN-208ENST00000610470 RAB14P61106 215 aa11.21□□□□□ -0.61
PRKN-208ENST00000610470 GFRA4Q9GZZ7 299 aa11.21□□□□□ -0.61
PRKN-208ENST00000610470 NCR2O95944 276 aa11.2□□□□□ -0.62
PRKN-208ENST00000610470 CT83Q5H943 113 aa11.2□□□□□ -0.62
PRKN-208ENST00000610470 LINC01551Q86U37 167 aa11.2□□□□□ -0.62
PRKN-208ENST00000610470 BORCS7Q96B45 105 aa11.2□□□□□ -0.62
PRKN-208ENST00000610470 hDV102S1A0JD36 115 aa11.19□□□□□ -0.62
PRKN-208ENST00000610470 KRTAP29-1A8MX34 341 aaPredicted RBP11.19□□□□□ -0.62
PRKN-208ENST00000610470 CNBPP62633 177 aaKnown RBP11.19□□□□□ -0.62
PRKN-208ENST00000610470 RPL39LQ96EH5 51 aaKnown RBP11.19□□□□□ -0.62
PRKN-208ENST00000610470 AP5S1Q9NUS5 200 aa11.19□□□□□ -0.62
PRKN-208ENST00000610470 APCSP02743 223 aa11.18□□□□□ -0.62
PRKN-208ENST00000610470 FOXA3P55318 350 aaPredicted RBP11.18□□□□□ -0.62
PRKN-208ENST00000610470 TMEM241Q24JQ0 296 aa11.18□□□□□ -0.62
PRKN-208ENST00000610470 FAM74A3Q4VXF1 159 aa11.18□□□□□ -0.62
PRKN-208ENST00000610470 AMMECR1LQ6DCA0 310 aa11.18□□□□□ -0.62
PRKN-208ENST00000610470 SMDT1Q9H4I9 107 aa11.18□□□□□ -0.62
PRKN-208ENST00000610470 SDHAF1A6NFY7 115 aa11.17□□□□□ -0.62
PRKN-208ENST00000610470 H7C423 109 aa11.17□□□□□ -0.62
PRKN-208ENST00000610470 KRTAP10-4P60372 401 aaPredicted RBP11.17□□□□□ -0.62
PRKN-208ENST00000610470 IFITM2Q01629 132 aa11.17□□□□□ -0.62
PRKN-208ENST00000610470 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.16□□□□□ -0.62
PRKN-208ENST00000610470 SDIM1Q6ZPB5 146 aa11.16□□□□□ -0.62
PRKN-208ENST00000610470 IGKV3OR2-268A0A0C4DH90 116 aa11.15□□□□□ -0.62
PRKN-208ENST00000610470 I3L3M4 83 aa11.15□□□□□ -0.62
PRKN-208ENST00000610470 RPL37AP61513 92 aaKnown RBP11.15□□□□□ -0.62
PRKN-208ENST00000610470 RPL23P62829 140 aaKnown RBP11.15□□□□□ -0.62
PRKN-208ENST00000610470 RNASEKQ6P5S7 137 aaKnown RBP11.15□□□□□ -0.62
PRKN-208ENST00000610470 CFAP161Q6P656 301 aa11.15□□□□□ -0.62
PRKN-208ENST00000610470 TSKUQ8WUA8 353 aa11.15□□□□□ -0.62
PRKN-208ENST00000610470 NAT8Q9UHE5 227 aa11.15□□□□□ -0.62
PRKN-208ENST00000610470 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.15□□□□□ -0.62
PRKN-208ENST00000610470 IGHV3-64A0A075B6Q5 118 aa11.14□□□□□ -0.63
PRKN-208ENST00000610470 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.14□□□□□ -0.63
PRKN-208ENST00000610470 TRBV6-5A0A0K0K1A5 114 aa11.14□□□□□ -0.63
PRKN-208ENST00000610470 A0A1B0GUT8 65 aa11.14□□□□□ -0.63
PRKN-208ENST00000610470 IGKV2-29A2NJV5 120 aaPredicted RBP11.14□□□□□ -0.63
PRKN-208ENST00000610470 GAGE12HA6NDE8 117 aa11.14□□□□□ -0.63
PRKN-208ENST00000610470 PMCHP20382 165 aa11.14□□□□□ -0.63
PRKN-208ENST00000610470 ADIRFQ15847 76 aa11.14□□□□□ -0.63
PRKN-208ENST00000610470 CLLU1Q5K131 121 aa11.14□□□□□ -0.63
PRKN-208ENST00000610470 ISOC2Q96AB3 205 aa11.14□□□□□ -0.63
PRKN-208ENST00000610470 OSTCQ9NRP0 149 aa11.14□□□□□ -0.63
PRKN-208ENST00000610470 FAM231BA6NCW3 169 aa11.13□□□□□ -0.63
PRKN-208ENST00000610470 HIGD1CA8MV81 97 aa11.13□□□□□ -0.63
PRKN-208ENST00000610470 FGF6P10767 208 aa11.13□□□□□ -0.63
PRKN-208ENST00000610470 TMEM191AQ9H0A3 160 aa11.13□□□□□ -0.63
PRKN-208ENST00000610470 ST20Q9HBF5 79 aa11.13□□□□□ -0.63
PRKN-208ENST00000610470 FAT3Q8TDW7 4589 aa11.13□□□□□ -0.63
PRKN-208ENST00000610470 PKHD1L1Q86WI1 4243 aa11.12□□□□□ -0.63
PRKN-208ENST00000610470 ZNF25P17030 456 aaPredicted RBP11.12□□□□□ -0.63
PRKN-208ENST00000610470 CHCHD10Q8WYQ3 142 aaPredicted RBP11.12□□□□□ -0.63
PRKN-208ENST00000610470 BTF3L4Q96K17 158 aa11.12□□□□□ -0.63
PRKN-208ENST00000610470 LRP1Q07954 4544 aaKnown RBP11.12□□□□□ -0.63
PRKN-208ENST00000610470 PANO1I0J062 215 aa11.11□□□□□ -0.63
PRKN-208ENST00000610470 SLPIP03973 132 aa11.11□□□□□ -0.63
PRKN-208ENST00000610470 C15orf56Q8N910 161 aa11.11□□□□□ -0.63
PRKN-208ENST00000610470 TMEM101Q96IK0 257 aa11.11□□□□□ -0.63
PRKN-208ENST00000610470 V9GYV3 84 aa11.11□□□□□ -0.63
PRKN-208ENST00000610470 OXTP01178 125 aa11.1□□□□□ -0.63
PRKN-208ENST00000610470 CIRBPQ14011 172 aaKnown RBP11.1□□□□□ -0.63
PRKN-208ENST00000610470 MRAP2Q96G30 205 aa11.1□□□□□ -0.63
PRKN-208ENST00000610470 RAB4AP20338 218 aa11.09□□□□□ -0.63
PRKN-208ENST00000610470 RIGQ13278 110 aa11.09□□□□□ -0.63
PRKN-208ENST00000610470 OR5A1Q8NGJ0 315 aa11.09□□□□□ -0.63
PRKN-208ENST00000610470 DPH3Q96FX2 82 aa11.09□□□□□ -0.63
PRKN-208ENST00000610470 RNF185Q96GF1 192 aa11.09□□□□□ -0.63
PRKN-208ENST00000610470 GAS8-AS1O95177 125 aa11.08□□□□□ -0.64
PRKN-208ENST00000610470 TSHBP01222 138 aa11.08□□□□□ -0.64
PRKN-208ENST00000610470 ESDP10768 282 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms