RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 CEND1Q8N111 149 aa8.63□□□□□ -1.03
USP6NL-206ENST00000609853 OR4C5Q8NGB2 326 aa8.63□□□□□ -1.03
USP6NL-206ENST00000609853 C16orf74Q96GX8 76 aa8.63□□□□□ -1.03
USP6NL-206ENST00000609853 SPANXA1Q9NS26 97 aa8.63□□□□□ -1.03
USP6NL-206ENST00000609853 IGLV4-3A0A075B6K6 122 aa8.63□□□□□ -1.03
USP6NL-206ENST00000609853 IGHV3OR16-12A0A075B7B8 117 aa8.63□□□□□ -1.03
USP6NL-206ENST00000609853 TRAV4A0A0B4J268 109 aa8.63□□□□□ -1.03
USP6NL-206ENST00000609853 PF4P02776 101 aa8.63□□□□□ -1.03
USP6NL-206ENST00000609853 SMIM13P0DJ93 91 aa8.63□□□□□ -1.03
USP6NL-206ENST00000609853 GCSHP23434 173 aa8.63□□□□□ -1.03
USP6NL-206ENST00000609853 INSL3P51460 131 aa8.63□□□□□ -1.03
USP6NL-206ENST00000609853 TRGV1A0A0A0MS02 117 aa8.62□□□□□ -1.03
USP6NL-206ENST00000609853 GIG44P09565 113 aaPredicted RBP8.62□□□□□ -1.03
USP6NL-206ENST00000609853 COTL1Q14019 142 aa8.62□□□□□ -1.03
USP6NL-206ENST00000609853 Q6ZSN1 163 aa8.62□□□□□ -1.03
USP6NL-206ENST00000609853 LINC00482Q8N8I6 264 aa8.62□□□□□ -1.03
USP6NL-206ENST00000609853 AMELXQ99217 191 aa8.62□□□□□ -1.03
USP6NL-206ENST00000609853 CCL25O15444 150 aa8.61□□□□□ -1.03
USP6NL-206ENST00000609853 TMEM170BQ5T4T1 132 aa8.61□□□□□ -1.03
USP6NL-206ENST00000609853 ZNRF2Q8NHG8 242 aa8.61□□□□□ -1.03
USP6NL-206ENST00000609853 DEFB104AQ8WTQ1 72 aa8.61□□□□□ -1.03
USP6NL-206ENST00000609853 HIST1H4GQ99525 98 aa8.61□□□□□ -1.03
USP6NL-206ENST00000609853 CUBNO60494 3623 aa8.61□□□□□ -1.03
USP6NL-206ENST00000609853 ZNF815PA8K554 130 aa8.6□□□□□ -1.03
USP6NL-206ENST00000609853 CHCHD7Q9BUK0 85 aa8.6□□□□□ -1.03
USP6NL-206ENST00000609853 TRBV7-3A0A075B6L6 115 aa8.6□□□□□ -1.03
USP6NL-206ENST00000609853 FXYD2P54710 66 aa8.6□□□□□ -1.03
USP6NL-206ENST00000609853 KRTAP10-3P60369 221 aa8.6□□□□□ -1.03
USP6NL-206ENST00000609853 RPL36AP83881 106 aaKnown RBP8.6□□□□□ -1.03
USP6NL-206ENST00000609853 CSNK1G2-AS1Q8NCQ2 148 aa8.6□□□□□ -1.03
USP6NL-206ENST00000609853 RPL36ALQ969Q0 106 aaKnown RBP8.6□□□□□ -1.03
USP6NL-206ENST00000609853 OVOL2Q9BRP0 275 aa8.6□□□□□ -1.03
USP6NL-206ENST00000609853 TIMM21Q9BVV7 248 aa8.6□□□□□ -1.03
USP6NL-206ENST00000609853 OTOGQ6ZRI0 2925 aa8.59□□□□□ -1.03
USP6NL-206ENST00000609853 INAFM1C9JVW0 142 aa8.59□□□□□ -1.03
USP6NL-206ENST00000609853 SMAGPQ0VAQ4 97 aa8.59□□□□□ -1.03
USP6NL-206ENST00000609853 RRN3P1Q2M238 152 aa8.59□□□□□ -1.03
USP6NL-206ENST00000609853 AMMECR1LQ6DCA0 310 aa8.59□□□□□ -1.03
USP6NL-206ENST00000609853 SCGB1D4Q6XE38 83 aa8.59□□□□□ -1.03
USP6NL-206ENST00000609853 GTF2H5Q6ZYL4 71 aa8.59□□□□□ -1.03
USP6NL-206ENST00000609853 DAZ4Q86SG3 579 aaKnown RBP8.59□□□□□ -1.03
USP6NL-206ENST00000609853 DAZ3Q9NR90 486 aaKnown RBP8.59□□□□□ -1.03
USP6NL-206ENST00000609853 TEP1Q99973 2627 aaKnown RBP8.58□□□□□ -1.04
USP6NL-206ENST00000609853 TMEM223A0PJW6 202 aa8.58□□□□□ -1.04
USP6NL-206ENST00000609853 K7EQD1 137 aa8.58□□□□□ -1.04
USP6NL-206ENST00000609853 LEPROTO15243 131 aa8.58□□□□□ -1.04
USP6NL-206ENST00000609853 RPL35AP18077 110 aaKnown RBP8.58□□□□□ -1.04
USP6NL-206ENST00000609853 EMP1P54849 157 aa8.58□□□□□ -1.04
USP6NL-206ENST00000609853 MRPS36P82909 103 aaKnown RBP8.58□□□□□ -1.04
USP6NL-206ENST00000609853 Q6ZTI0 123 aa8.58□□□□□ -1.04
USP6NL-206ENST00000609853 OPRPNQ99935 248 aaPredicted RBP8.58□□□□□ -1.04
USP6NL-206ENST00000609853 UBE2D4Q9Y2X8 147 aa8.58□□□□□ -1.04
USP6NL-206ENST00000609853 TMEM238LA0A1B0GVL6 79 aa8.57□□□□□ -1.04
USP6NL-206ENST00000609853 A6NJY4 79 aa8.57□□□□□ -1.04
USP6NL-206ENST00000609853 PLEKHB2Q96CS7 222 aa8.57□□□□□ -1.04
USP6NL-206ENST00000609853 ZNF479Q96JC4 524 aa8.57□□□□□ -1.04
USP6NL-206ENST00000609853 NOP10Q9NPE3 64 aaKnown RBP8.57□□□□□ -1.04
USP6NL-206ENST00000609853 NSD1Q96L73 2696 aaPredicted RBP8.57□□□□□ -1.04
USP6NL-206ENST00000609853 NIPBLQ6KC79 2804 aaeCLIP8.57□□□□□ -1.04
USP6NL-206ENST00000609853 GAGE10A6NGK3 116 aa8.57□□□□□ -1.04
USP6NL-206ENST00000609853 J3QQQ9 107 aa8.57□□□□□ -1.04
USP6NL-206ENST00000609853 ZNF22P17026 224 aaPredicted RBP8.57□□□□□ -1.04
USP6NL-206ENST00000609853 LGALS3P17931 250 aaKnown RBP8.57□□□□□ -1.04
USP6NL-206ENST00000609853 C9orf66Q5T8R8 295 aa8.57□□□□□ -1.04
USP6NL-206ENST00000609853 WFDC10AQ9H1F0 79 aa8.57□□□□□ -1.04
USP6NL-206ENST00000609853 Q9UF83 564 aa8.57□□□□□ -1.04
USP6NL-206ENST00000609853 JMJD1CQ15652 2540 aa8.56□□□□□ -1.04
USP6NL-206ENST00000609853 TINCRA0A1B0GVN0 87 aa8.56□□□□□ -1.04
USP6NL-206ENST00000609853 A0A1B0GWB2 263 aa8.56□□□□□ -1.04
USP6NL-206ENST00000609853 PLAC8L1A1L4L8 177 aa8.56□□□□□ -1.04
USP6NL-206ENST00000609853 H3BUT2 72 aa8.56□□□□□ -1.04
USP6NL-206ENST00000609853 CRLF1O75462 422 aa8.56□□□□□ -1.04
USP6NL-206ENST00000609853 FAM104AQ969W3 186 aa8.56□□□□□ -1.04
USP6NL-206ENST00000609853 SPANXB1Q9NS25 103 aaPredicted RBP8.56□□□□□ -1.04
USP6NL-206ENST00000609853 NHP2Q9NX24 153 aaKnown RBP8.56□□□□□ -1.04
USP6NL-206ENST00000609853 A0A0J9YXV3 536 aa8.55□□□□□ -1.04
USP6NL-206ENST00000609853 TRBV6-4A0A1B0GX49 114 aa8.55□□□□□ -1.04
USP6NL-206ENST00000609853 A0A1W2PPM0 123 aa8.55□□□□□ -1.04
USP6NL-206ENST00000609853 FABP2P12104 132 aa8.55□□□□□ -1.04
USP6NL-206ENST00000609853 PHLDA1Q8WV24 401 aaPredicted RBP8.55□□□□□ -1.04
USP6NL-206ENST00000609853 CSDC2Q9Y534 153 aaKnown RBP8.55□□□□□ -1.04
USP6NL-206ENST00000609853 TRGV2A0A075B6R0 118 aa8.54□□□□□ -1.04
USP6NL-206ENST00000609853 A0A0J9YY99 117 aa8.54□□□□□ -1.04
USP6NL-206ENST00000609853 UBE2D3P61077 147 aa8.54□□□□□ -1.04
USP6NL-206ENST00000609853 UBE2D2P62837 147 aa8.54□□□□□ -1.04
USP6NL-206ENST00000609853 SRSF9Q13242 221 aaKnown RBP eCLIP8.54□□□□□ -1.04
USP6NL-206ENST00000609853 C12orf74Q32Q52 190 aa8.54□□□□□ -1.04
USP6NL-206ENST00000609853 SAMD5Q5TGI4 173 aa8.54□□□□□ -1.04
USP6NL-206ENST00000609853 SLC25A29Q8N8R3 303 aa8.54□□□□□ -1.04
USP6NL-206ENST00000609853 OR5A1Q8NGJ0 315 aa8.54□□□□□ -1.04
USP6NL-206ENST00000609853 RAB37Q96AX2 223 aa8.54□□□□□ -1.04
USP6NL-206ENST00000609853 GTSF1LQ9H1H1 148 aa8.54□□□□□ -1.04
USP6NL-206ENST00000609853 C2CD3Q4AC94 2353 aa8.54□□□□□ -1.04
USP6NL-206ENST00000609853 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.54□□□□□ -1.04
USP6NL-206ENST00000609853 IGKV2-29A2NJV5 120 aaPredicted RBP8.54□□□□□ -1.04
USP6NL-206ENST00000609853 SMIM9A6NGZ8 99 aa8.54□□□□□ -1.04
USP6NL-206ENST00000609853 K7EP34 96 aa8.54□□□□□ -1.04
USP6NL-206ENST00000609853 DGAT2L7PQ6IED9 249 aa8.54□□□□□ -1.04
USP6NL-206ENST00000609853 IGHV3-38A0A0C4DH36 116 aa8.53□□□□□ -1.04
USP6NL-206ENST00000609853 K7EP13 123 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms