RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 IGIPA6NJ69 53 aa15.25■□□□□ 0.03
USP6NL-204ENST00000606752 SPART-AS1P0CW21 52 aa15.25■□□□□ 0.03
USP6NL-204ENST00000606752 GAGE1Q13065 139 aa15.25■□□□□ 0.03
USP6NL-204ENST00000606752 GAGE4Q13068 117 aa15.25■□□□□ 0.03
USP6NL-204ENST00000606752 GAGE5Q13069 117 aa15.25■□□□□ 0.03
USP6NL-204ENST00000606752 COTL1Q14019 142 aa15.25■□□□□ 0.03
USP6NL-204ENST00000606752 GAGE13Q4V321 117 aa15.25■□□□□ 0.03
USP6NL-204ENST00000606752 KPRPQ5T749 579 aaPredicted RBP15.25■□□□□ 0.03
USP6NL-204ENST00000606752 DAZ4Q86SG3 579 aaKnown RBP15.25■□□□□ 0.03
USP6NL-204ENST00000606752 DAZ3Q9NR90 486 aaKnown RBP15.25■□□□□ 0.03
USP6NL-204ENST00000606752 HHLA3Q9XRX5 114 aa15.25■□□□□ 0.03
USP6NL-204ENST00000606752 DNAH3Q8TD57 4116 aa15.25■□□□□ 0.03
USP6NL-204ENST00000606752 UBE2D3P61077 147 aa15.24■□□□□ 0.03
USP6NL-204ENST00000606752 UBE2D2P62837 147 aa15.24■□□□□ 0.03
USP6NL-204ENST00000606752 PRO1933Q9H354 126 aa15.24■□□□□ 0.03
USP6NL-204ENST00000606752 TSTD3H0UI37 97 aa15.24■□□□□ 0.03
USP6NL-204ENST00000606752 DAD1P61803 113 aa15.24■□□□□ 0.03
USP6NL-204ENST00000606752 ODF1Q14990 250 aa15.24■□□□□ 0.03
USP6NL-204ENST00000606752 TMEM141Q96I45 108 aa15.24■□□□□ 0.03
USP6NL-204ENST00000606752 TIMM17AQ99595 171 aa15.24■□□□□ 0.03
USP6NL-204ENST00000606752 NOTCH1P46531 2555 aa15.23■□□□□ 0.03
USP6NL-204ENST00000606752 RETNQ9HD89 108 aa15.23■□□□□ 0.03
USP6NL-204ENST00000606752 CELA1Q9UNI1 258 aa15.23■□□□□ 0.03
USP6NL-204ENST00000606752 PRB2P02812 416 aaPredicted RBP15.22■□□□□ 0.03
USP6NL-204ENST00000606752 LURAP1LQ8IV03 231 aa15.22■□□□□ 0.03
USP6NL-204ENST00000606752 TRAV12-1A0A0B4J245 112 aa15.22■□□□□ 0.03
USP6NL-204ENST00000606752 LOC100131303A0A0U1RQF7 123 aa15.22■□□□□ 0.03
USP6NL-204ENST00000606752 MAJINQ3KP22 176 aa15.22■□□□□ 0.03
USP6NL-204ENST00000606752 SPATA45Q537H7 98 aa15.22■□□□□ 0.03
USP6NL-204ENST00000606752 CHCHD7Q9BUK0 85 aa15.22■□□□□ 0.03
USP6NL-204ENST00000606752 BAALCQ8WXS3 180 aa15.21■□□□□ 0.03
USP6NL-204ENST00000606752 A0A087WX48 190 aa15.2■□□□□ 0.02
USP6NL-204ENST00000606752 TEX48A0A1B0GUV7 120 aa15.2■□□□□ 0.02
USP6NL-204ENST00000606752 PRO0255Q9UI72 69 aa15.2■□□□□ 0.02
USP6NL-204ENST00000606752 K7EIL1 84 aa15.2■□□□□ 0.02
USP6NL-204ENST00000606752 CRYBA4P53673 196 aa15.2■□□□□ 0.02
USP6NL-204ENST00000606752 MGAM2Q2M2H8 2515 aa15.19■□□□□ 0.02
USP6NL-204ENST00000606752 hDV102S1A0JD36 115 aa15.18■□□□□ 0.02
USP6NL-204ENST00000606752 HSBP1L1C9JCN9 74 aa15.18■□□□□ 0.02
USP6NL-204ENST00000606752 ATP5G1P05496 136 aa15.17■□□□□ 0.02
USP6NL-204ENST00000606752 SBSPONQ8IVN8 264 aa15.17■□□□□ 0.02
USP6NL-204ENST00000606752 PYGO1Q9Y3Y4 419 aa15.17■□□□□ 0.02
USP6NL-204ENST00000606752 GTSF1LQ9H1H1 148 aa15.17■□□□□ 0.02
USP6NL-204ENST00000606752 MRPL35Q9NZE8 188 aaKnown RBP15.17■□□□□ 0.02
USP6NL-204ENST00000606752 NBEAL1Q6ZS30 2694 aa15.16■□□□□ 0.02
USP6NL-204ENST00000606752 PRSS29PA6NIE9 313 aa15.16■□□□□ 0.02
USP6NL-204ENST00000606752 DPM2O94777 84 aa15.16■□□□□ 0.02
USP6NL-204ENST00000606752 LINC00694P0DN24 101 aa15.16■□□□□ 0.02
USP6NL-204ENST00000606752 NTM-AS1Q6ZSK4 140 aa15.16■□□□□ 0.02
USP6NL-204ENST00000606752 IGKCP01834 107 aa15.15■□□□□ 0.02
USP6NL-204ENST00000606752 PMVKQ15126 192 aa15.15■□□□□ 0.02
USP6NL-204ENST00000606752 DEFB121Q5J5C9 76 aa15.15■□□□□ 0.02
USP6NL-204ENST00000606752 C11orf68Q9H3H3 251 aaKnown RBP15.15■□□□□ 0.02
USP6NL-204ENST00000606752 CHTOPQ9Y3Y2 248 aaKnown RBP15.15■□□□□ 0.02
USP6NL-204ENST00000606752 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.15■□□□□ 0.02
USP6NL-204ENST00000606752 IGKV2-29A2NJV5 120 aaPredicted RBP15.15■□□□□ 0.02
USP6NL-204ENST00000606752 F8VRH5 84 aa15.15■□□□□ 0.02
USP6NL-204ENST00000606752 PAX4O43316 350 aa15.15■□□□□ 0.02
USP6NL-204ENST00000606752 GYPEP15421 78 aa15.15■□□□□ 0.02
USP6NL-204ENST00000606752 CST9LQ9H4G1 147 aa15.14■□□□□ 0.01
USP6NL-204ENST00000606752 SPANXA1Q9NS26 97 aa15.14■□□□□ 0.01
USP6NL-204ENST00000606752 NPSP0C0P6 89 aa15.13■□□□□ 0.01
USP6NL-204ENST00000606752 PLNP26678 52 aa15.13■□□□□ 0.01
USP6NL-204ENST00000606752 OPRPNQ99935 248 aaPredicted RBP15.13■□□□□ 0.01
USP6NL-204ENST00000606752 UBE2D4Q9Y2X8 147 aa15.13■□□□□ 0.01
USP6NL-204ENST00000606752 IGLV4-3A0A075B6K6 122 aa15.13■□□□□ 0.01
USP6NL-204ENST00000606752 PAPPA-AS1Q5QFB9 102 aa15.13■□□□□ 0.01
USP6NL-204ENST00000606752 DDTP30046 118 aa15.12■□□□□ 0.01
USP6NL-204ENST00000606752 C12orf74Q32Q52 190 aa15.12■□□□□ 0.01
USP6NL-204ENST00000606752 F5H768 121 aa15.11■□□□□ 0.01
USP6NL-204ENST00000606752 ZC2HC1BQ5TFG8 222 aa15.11■□□□□ 0.01
USP6NL-204ENST00000606752 STPG4Q8N801 248 aa15.11■□□□□ 0.01
USP6NL-204ENST00000606752 VSIG2Q96IQ7 327 aa15.11■□□□□ 0.01
USP6NL-204ENST00000606752 SPATA25Q9BR10 227 aa15.11■□□□□ 0.01
USP6NL-204ENST00000606752 IGLC3P0DOY3 106 aa15.1■□□□□ 0.01
USP6NL-204ENST00000606752 CEMP1Q6PRD7 247 aaPredicted RBP15.1■□□□□ 0.01
USP6NL-204ENST00000606752 TIMM21Q9BVV7 248 aa15.1■□□□□ 0.01
USP6NL-204ENST00000606752 VCX2Q9H322 139 aa15.1■□□□□ 0.01
USP6NL-204ENST00000606752 TMEM97Q5BJF2 176 aa15.1■□□□□ 0.01
USP6NL-204ENST00000606752 ATP6V0E2Q8NHE4 81 aa15.1■□□□□ 0.01
USP6NL-204ENST00000606752 FAM104AQ969W3 186 aa15.1■□□□□ 0.01
USP6NL-204ENST00000606752 TM2D3Q9BRN9 247 aa15.1■□□□□ 0.01
USP6NL-204ENST00000606752 MIEN1Q9BRT3 115 aa15.1■□□□□ 0.01
USP6NL-204ENST00000606752 TRBV25-1A0A075B6N4 114 aa15.09■□□□□ 0.01
USP6NL-204ENST00000606752 C14orf144Q96I85 54 aa15.09■□□□□ 0.01
USP6NL-204ENST00000606752 TMEM243Q9BU79 118 aa15.09■□□□□ 0.01
USP6NL-204ENST00000606752 A0A0J9YY99 117 aa15.08■□□□□ 0.01
USP6NL-204ENST00000606752 HTN3P15516 51 aa15.08■□□□□ 0.01
USP6NL-204ENST00000606752 MRAPQ8TCY5 172 aa15.08■□□□□ 0.01
USP6NL-204ENST00000606752 TRAV26-1A0A087WT03 109 aa15.08■□□□□ 0
USP6NL-204ENST00000606752 TRBV6-8A0A0A6YYG3 113 aa15.08■□□□□ 0
USP6NL-204ENST00000606752 A0A0J9YWU9 116 aa15.08■□□□□ 0
USP6NL-204ENST00000606752 LINC00587B1AMM8 73 aa15.08■□□□□ 0
USP6NL-204ENST00000606752 AMELXQ99217 191 aa15.08■□□□□ 0
USP6NL-204ENST00000606752 ANKRD39Q53RE8 183 aa15.07■□□□□ 0
USP6NL-204ENST00000606752 MRPL52Q86TS9 123 aaKnown RBP15.07■□□□□ 0
USP6NL-204ENST00000606752 UQCR10Q9UDW1 63 aa15.07■□□□□ 0
USP6NL-204ENST00000606752 MRPS36P82909 103 aaKnown RBP15.06■□□□□ 0
USP6NL-204ENST00000606752 SMAGPQ0VAQ4 97 aa15.06■□□□□ 0
USP6NL-204ENST00000606752 DGAT2L7PQ6IED9 249 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms