RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 Q6ZN92 141 aa8.69□□□□□ -1.02
NEDD8-MDP1-203ENST00000604306 VAMP8Q9BV40 100 aa8.69□□□□□ -1.02
NEDD8-MDP1-203ENST00000604306 TIMM21Q9BVV7 248 aa8.69□□□□□ -1.02
NEDD8-MDP1-203ENST00000604306 PKD1L1Q8TDX9 2849 aa8.69□□□□□ -1.02
NEDD8-MDP1-203ENST00000604306 DNAH3Q8TD57 4116 aa8.68□□□□□ -1.02
NEDD8-MDP1-203ENST00000604306 TRAV9-2A0A087WT02 112 aa8.68□□□□□ -1.02
NEDD8-MDP1-203ENST00000604306 TSTD3H0UI37 97 aa8.68□□□□□ -1.02
NEDD8-MDP1-203ENST00000604306 H7C423 109 aa8.68□□□□□ -1.02
NEDD8-MDP1-203ENST00000604306 ATP5G1P05496 136 aa8.68□□□□□ -1.02
NEDD8-MDP1-203ENST00000604306 DEFB130BP0DP73 79 aa8.68□□□□□ -1.02
NEDD8-MDP1-203ENST00000604306 DEFB130AP0DP74 79 aa8.68□□□□□ -1.02
NEDD8-MDP1-203ENST00000604306 CDPF1Q6NVV7 123 aa8.68□□□□□ -1.02
NEDD8-MDP1-203ENST00000604306 NEGR1Q7Z3B1 354 aa8.68□□□□□ -1.02
NEDD8-MDP1-203ENST00000604306 LURAP1LQ8IV03 231 aa8.68□□□□□ -1.02
NEDD8-MDP1-203ENST00000604306 ZNRF2Q8NHG8 242 aa8.68□□□□□ -1.02
NEDD8-MDP1-203ENST00000604306 SPATA25Q9BR10 227 aa8.68□□□□□ -1.02
NEDD8-MDP1-203ENST00000604306 SPANXA1Q9NS26 97 aa8.68□□□□□ -1.02
NEDD8-MDP1-203ENST00000604306 A0A087WX48 190 aa8.67□□□□□ -1.02
NEDD8-MDP1-203ENST00000604306 PRSS1P07477 247 aa8.67□□□□□ -1.02
NEDD8-MDP1-203ENST00000604306 ODF1Q14990 250 aa8.67□□□□□ -1.02
NEDD8-MDP1-203ENST00000604306 TM2D3Q9BRN9 247 aa8.67□□□□□ -1.02
NEDD8-MDP1-203ENST00000604306 HHLA3Q9XRX5 114 aa8.67□□□□□ -1.02
NEDD8-MDP1-203ENST00000604306 TRAV26-1A0A087WT03 109 aa8.66□□□□□ -1.02
NEDD8-MDP1-203ENST00000604306 K7EIL1 84 aa8.66□□□□□ -1.02
NEDD8-MDP1-203ENST00000604306 PLNP26678 52 aa8.66□□□□□ -1.02
NEDD8-MDP1-203ENST00000604306 SH2D6Q7Z4S9 175 aa8.66□□□□□ -1.02
NEDD8-MDP1-203ENST00000604306 CHCHD7Q9BUK0 85 aa8.66□□□□□ -1.02
NEDD8-MDP1-203ENST00000604306 CSDC2Q9Y534 153 aaKnown RBP8.66□□□□□ -1.02
NEDD8-MDP1-203ENST00000604306 HSBP1L1C9JCN9 74 aa8.65□□□□□ -1.02
NEDD8-MDP1-203ENST00000604306 F8VRH5 84 aa8.65□□□□□ -1.02
NEDD8-MDP1-203ENST00000604306 H3BNG1 76 aa8.65□□□□□ -1.02
NEDD8-MDP1-203ENST00000604306 MRPL52Q86TS9 123 aaKnown RBP8.65□□□□□ -1.02
NEDD8-MDP1-203ENST00000604306 ZNF664Q8N3J9 261 aa8.65□□□□□ -1.02
NEDD8-MDP1-203ENST00000604306 BAALCQ8WXS3 180 aa8.65□□□□□ -1.02
NEDD8-MDP1-203ENST00000604306 DPM2O94777 84 aa8.64□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 MRPS36P82909 103 aaKnown RBP8.64□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 PMVKQ15126 192 aa8.64□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 Q9UF83 564 aa8.64□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 CELA1Q9UNI1 258 aa8.64□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 GAGE12JA6NER3 117 aa8.63□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 IGKCP01834 107 aa8.63□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 RPL39P62891 51 aaKnown RBP8.63□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 GAGE1Q13065 139 aa8.63□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 GAGE4Q13068 117 aa8.63□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 GAGE5Q13069 117 aa8.63□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 GAGE13Q4V321 117 aa8.63□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 SBSPONQ8IVN8 264 aa8.63□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 UBE2D4Q9Y2X8 147 aa8.63□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 TRBV25-1A0A075B6N4 114 aa8.62□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 H0Y8G0 127 aa8.62□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 PAX4O43316 350 aa8.62□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 ZNF25P17030 456 aaPredicted RBP8.62□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 SPATA45Q537H7 98 aa8.62□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 PHLDA1Q8WV24 401 aaPredicted RBP8.62□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 PAM16Q9Y3D7 125 aa8.62□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 IGLV4-3A0A075B6K6 122 aa8.61□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 DEFB4AO15263 64 aa8.61□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 GYPEP15421 78 aa8.61□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 NTM-AS1Q6ZSK4 140 aa8.61□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 ATP6V0E2Q8NHE4 81 aa8.61□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 AMELXQ99217 191 aa8.61□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 TMEM243Q9BU79 118 aa8.61□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 CST9LQ9H4G1 147 aa8.61□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 CHTOPQ9Y3Y2 248 aaKnown RBP8.61□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 TRBV6-8A0A0A6YYG3 113 aa8.6□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 IGHV3-38A0A0C4DH36 116 aa8.6□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 PRSS29PA6NIE9 313 aa8.6□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 TIRAPP58753 221 aa8.6□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 C12orf74Q32Q52 190 aa8.6□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 RETNQ9HD89 108 aa8.6□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 MRPL35Q9NZE8 188 aaKnown RBP8.6□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 NOTCH1P46531 2555 aa8.59□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 LOC100131303A0A0U1RQF7 123 aa8.59□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 MRPL23Q16540 153 aaKnown RBP8.59□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 NFE4Q86UQ8 179 aa8.59□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 ATOH7Q8N100 152 aa8.59□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 VSIG2Q96IQ7 327 aa8.59□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 MIEN1Q9BRT3 115 aa8.59□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 VCX2Q9H322 139 aa8.59□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 NBEAL1Q6ZS30 2694 aa8.59□□□□□ -1.03
NEDD8-MDP1-203ENST00000604306 NBEAL2Q6ZNJ1 2754 aa8.58□□□□□ -1.04
NEDD8-MDP1-203ENST00000604306 UBE2L6O14933 153 aa8.58□□□□□ -1.04
NEDD8-MDP1-203ENST00000604306 IGLC3P0DOY3 106 aa8.58□□□□□ -1.04
NEDD8-MDP1-203ENST00000604306 DDTP30046 118 aa8.58□□□□□ -1.04
NEDD8-MDP1-203ENST00000604306 FAM19A3Q7Z5A8 133 aa8.58□□□□□ -1.04
NEDD8-MDP1-203ENST00000604306 PMCHL2Q9BQD1 86 aa8.58□□□□□ -1.04
NEDD8-MDP1-203ENST00000604306 C2orf88Q9BSF0 95 aa8.58□□□□□ -1.04
NEDD8-MDP1-203ENST00000604306 UQCR10Q9UDW1 63 aa8.58□□□□□ -1.04
NEDD8-MDP1-203ENST00000604306 ICOSQ9Y6W8 199 aa8.58□□□□□ -1.04
NEDD8-MDP1-203ENST00000604306 MGAM2Q2M2H8 2515 aa8.57□□□□□ -1.04
NEDD8-MDP1-203ENST00000604306 IGLV4-69A0A075B6H9 119 aa8.57□□□□□ -1.04
NEDD8-MDP1-203ENST00000604306 F5H768 121 aa8.57□□□□□ -1.04
NEDD8-MDP1-203ENST00000604306 FGF6P10767 208 aa8.57□□□□□ -1.04
NEDD8-MDP1-203ENST00000604306 FAM104AQ969W3 186 aa8.57□□□□□ -1.04
NEDD8-MDP1-203ENST00000604306 B9D2Q9BPU9 175 aa8.57□□□□□ -1.04
NEDD8-MDP1-203ENST00000604306 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.56□□□□□ -1.04
NEDD8-MDP1-203ENST00000604306 A0A0J9YWU9 116 aa8.56□□□□□ -1.04
NEDD8-MDP1-203ENST00000604306 A0A1B0GUV1 79 aa8.56□□□□□ -1.04
NEDD8-MDP1-203ENST00000604306 hDV102S1A0JD36 115 aa8.56□□□□□ -1.04
NEDD8-MDP1-203ENST00000604306 IGKV2-29A2NJV5 120 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms