RNA–Protein interactions for RNA: ENST00000600358.7

STRN4-218, Transcript of striatin 4, human

TSL 5

Gene STRN4, Length 1,267 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRN4-218	ENST00000600358	CHCHD1	Q96BP2	118 aa	Known RBP	11.27	□□□□□ -0.61
STRN4-218	ENST00000600358	URB1-AS1	Q96HZ7	61 aa		11.27	□□□□□ -0.61
STRN4-218	ENST00000600358	TRBV6-8	A0A0A6YYG3	113 aa		11.26	□□□□□ -0.61
STRN4-218	ENST00000600358	IGHV3-38	A0A0C4DH36	116 aa		11.26	□□□□□ -0.61
STRN4-218	ENST00000600358	ORMDL2	Q53FV1	153 aa		11.26	□□□□□ -0.61
STRN4-218	ENST00000600358	LELP1	Q5T871	98 aa		11.26	□□□□□ -0.61
STRN4-218	ENST00000600358	NTM-AS1	Q6ZSK4	140 aa		11.26	□□□□□ -0.61
STRN4-218	ENST00000600358	FA2H	Q7L5A8	372 aa		11.26	□□□□□ -0.61
STRN4-218	ENST00000600358	AP5S1	Q9NUS5	200 aa		11.26	□□□□□ -0.61
STRN4-218	ENST00000600358	IGHV1-24	A0A0C4DH33	117 aa		11.25	□□□□□ -0.61
STRN4-218	ENST00000600358	LINC00614	P0C842	121 aa		11.25	□□□□□ -0.61
STRN4-218	ENST00000600358	ESD	P10768	282 aa		11.25	□□□□□ -0.61
STRN4-218	ENST00000600358	LYPD5	Q6UWN5	251 aa		11.25	□□□□□ -0.61
STRN4-218	ENST00000600358	BAGE3	Q86Y29	109 aa		11.25	□□□□□ -0.61
STRN4-218	ENST00000600358	TRBV25-1	A0A075B6N4	114 aa		11.24	□□□□□ -0.61
STRN4-218	ENST00000600358	LINC01549	A6NIU2	74 aa		11.24	□□□□□ -0.61
STRN4-218	ENST00000600358	FCER1G	P30273	86 aa		11.24	□□□□□ -0.61
STRN4-218	ENST00000600358	LINC00310	P59036	64 aa		11.24	□□□□□ -0.61
STRN4-218	ENST00000600358	LAGE3	Q14657	143 aa		11.24	□□□□□ -0.61
STRN4-218	ENST00000600358	NIT1	Q86X76	327 aa		11.24	□□□□□ -0.61
STRN4-218	ENST00000600358		H7C423	109 aa		11.23	□□□□□ -0.61
STRN4-218	ENST00000600358	G0S2	P27469	103 aa		11.23	□□□□□ -0.61
STRN4-218	ENST00000600358	AMT	P48728	403 aa		11.23	□□□□□ -0.61
STRN4-218	ENST00000600358	CHCHD7	Q9BUK0	85 aa		11.23	□□□□□ -0.61
STRN4-218	ENST00000600358	MRPS16	Q9Y3D3	137 aa	Known RBP	11.23	□□□□□ -0.61
STRN4-218	ENST00000600358	SERF1A	O75920	110 aa		11.22	□□□□□ -0.61
STRN4-218	ENST00000600358	PKIA	P61925	76 aa		11.22	□□□□□ -0.61
STRN4-218	ENST00000600358	ESRG	Q1W209	222 aa		11.22	□□□□□ -0.61
STRN4-218	ENST00000600358	ZFAND6	Q6FIF0	208 aa		11.22	□□□□□ -0.61
STRN4-218	ENST00000600358	RNASEK	Q6P5S7	137 aa	Known RBP	11.22	□□□□□ -0.61
STRN4-218	ENST00000600358	UPK3B	Q9BT76	320 aa		11.22	□□□□□ -0.61
STRN4-218	ENST00000600358	TMEM243	Q9BU79	118 aa		11.22	□□□□□ -0.61
STRN4-218	ENST00000600358	CCL18	P55774	89 aa		11.21	□□□□□ -0.61
STRN4-218	ENST00000600358	CASC10	Q5T4H9	136 aa		11.21	□□□□□ -0.61
STRN4-218	ENST00000600358	C20orf203	Q8NBC4	194 aa		11.21	□□□□□ -0.61
STRN4-218	ENST00000600358	TMEM18	Q96B42	140 aa		11.21	□□□□□ -0.61
STRN4-218	ENST00000600358	ALMS1	Q8TCU4	4167 aa		11.2	□□□□□ -0.62
STRN4-218	ENST00000600358	VPS13D	Q5THJ4	4388 aa		11.2	□□□□□ -0.62
STRN4-218	ENST00000600358		A0A096LNJ9	63 aa		11.19	□□□□□ -0.62
STRN4-218	ENST00000600358	TRAV8-6	A0A0B4J262	113 aa		11.19	□□□□□ -0.62
STRN4-218	ENST00000600358	HSBP1	O75506	76 aa		11.19	□□□□□ -0.62
STRN4-218	ENST00000600358	SMAGP	Q0VAQ4	97 aa		11.19	□□□□□ -0.62
STRN4-218	ENST00000600358	MRPL52	Q86TS9	123 aa	Known RBP	11.19	□□□□□ -0.62
STRN4-218	ENST00000600358	TIMM21	Q9BVV7	248 aa		11.19	□□□□□ -0.62
STRN4-218	ENST00000600358	CYSLTR1	Q9Y271	337 aa		11.19	□□□□□ -0.62
STRN4-218	ENST00000600358	LINC00588	Q9Y4M8	146 aa		11.19	□□□□□ -0.62
STRN4-218	ENST00000600358	HBD	P02042	147 aa		11.18	□□□□□ -0.62
STRN4-218	ENST00000600358	NPS	P0C0P6	89 aa		11.18	□□□□□ -0.62
STRN4-218	ENST00000600358	NDUFA6	P56556	154 aa		11.18	□□□□□ -0.62
STRN4-218	ENST00000600358	TOMM6	Q96B49	74 aa		11.18	□□□□□ -0.62
STRN4-218	ENST00000600358	ZNF25	P17030	456 aa	Predicted RBP	11.17	□□□□□ -0.62
STRN4-218	ENST00000600358	C2orf66	Q6UXQ4	117 aa		11.17	□□□□□ -0.62
STRN4-218	ENST00000600358	PYGO1	Q9Y3Y4	419 aa		11.17	□□□□□ -0.62
STRN4-218	ENST00000600358	CSDC2	Q9Y534	153 aa	Known RBP	11.17	□□□□□ -0.62
STRN4-218	ENST00000600358	DNAH1	Q9P2D7	4330 aa		11.17	□□□□□ -0.62
STRN4-218	ENST00000600358	DNAH6	Q9C0G6	4158 aa		11.16	□□□□□ -0.62
STRN4-218	ENST00000600358	UBE2L6	O14933	153 aa		11.16	□□□□□ -0.62
STRN4-218	ENST00000600358	NUPR1	O60356	82 aa		11.16	□□□□□ -0.62
STRN4-218	ENST00000600358	S100A6	P06703	90 aa		11.16	□□□□□ -0.62
STRN4-218	ENST00000600358	DEFB104A	Q8WTQ1	72 aa		11.16	□□□□□ -0.62
STRN4-218	ENST00000600358	PACRG	Q96M98	296 aa	Predicted RBP	11.16	□□□□□ -0.62
STRN4-218	ENST00000600358	CHCHD5	Q9BSY4	110 aa		11.16	□□□□□ -0.62
STRN4-218	ENST00000600358	SPANXA1	Q9NS26	97 aa		11.16	□□□□□ -0.62
STRN4-218	ENST00000600358	LYST	Q99698	3801 aa		11.15	□□□□□ -0.62
STRN4-218	ENST00000600358	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	11.15	□□□□□ -0.62
STRN4-218	ENST00000600358		A0A1B0GUV1	79 aa		11.15	□□□□□ -0.62
STRN4-218	ENST00000600358	IGKV2-29	A2NJV5	120 aa	Predicted RBP	11.15	□□□□□ -0.62
STRN4-218	ENST00000600358	BTF3	P20290	206 aa	Known RBP	11.15	□□□□□ -0.62
STRN4-218	ENST00000600358	PDZD11	Q5EBL8	140 aa		11.15	□□□□□ -0.62
STRN4-218	ENST00000600358	TIMM17A	Q99595	171 aa		11.15	□□□□□ -0.62
STRN4-218	ENST00000600358	UBE2D4	Q9Y2X8	147 aa		11.15	□□□□□ -0.62
STRN4-218	ENST00000600358	DNAH10OS	P0CZ25	163 aa		11.14	□□□□□ -0.63
STRN4-218	ENST00000600358	RPL39	P62891	51 aa	Known RBP	11.14	□□□□□ -0.63
STRN4-218	ENST00000600358	LINC01556	Q5JQF7	62 aa		11.14	□□□□□ -0.63
STRN4-218	ENST00000600358	WFDC10B	Q8IUB3	73 aa		11.14	□□□□□ -0.63
STRN4-218	ENST00000600358	C5orf52	A6NGY3	159 aa		11.13	□□□□□ -0.63
STRN4-218	ENST00000600358	FGF6	P10767	208 aa		11.13	□□□□□ -0.63
STRN4-218	ENST00000600358	LGALS9C	Q6DKI2	356 aa		11.13	□□□□□ -0.63
STRN4-218	ENST00000600358	TENM2	Q9NT68	2774 aa		11.12	□□□□□ -0.63
STRN4-218	ENST00000600358	IGIP	A6NJ69	53 aa		11.12	□□□□□ -0.63
STRN4-218	ENST00000600358		K7EP13	123 aa		11.12	□□□□□ -0.63
STRN4-218	ENST00000600358	MRPS36	P82909	103 aa	Known RBP	11.12	□□□□□ -0.63
STRN4-218	ENST00000600358	GAGE6	Q13070	117 aa		11.12	□□□□□ -0.63
STRN4-218	ENST00000600358	PMCHL1	Q16048	86 aa		11.12	□□□□□ -0.63
STRN4-218	ENST00000600358	ERAS	Q7Z444	233 aa		11.12	□□□□□ -0.63
STRN4-218	ENST00000600358	UBE2DNL	Q8IWF7	75 aa		11.12	□□□□□ -0.63
STRN4-218	ENST00000600358	HIST3H2BB	Q8N257	126 aa		11.12	□□□□□ -0.63
STRN4-218	ENST00000600358	SIVA1	O15304	175 aa		11.11	□□□□□ -0.63
STRN4-218	ENST00000600358	MPV17L2	Q567V2	206 aa		11.11	□□□□□ -0.63
STRN4-218	ENST00000600358	FAM19A2	Q8N3H0	131 aa		11.11	□□□□□ -0.63
STRN4-218	ENST00000600358	TMEM141	Q96I45	108 aa		11.11	□□□□□ -0.63
STRN4-218	ENST00000600358		A0A087WX48	190 aa		11.1	□□□□□ -0.63
STRN4-218	ENST00000600358	ATP5L	O75964	103 aa		11.1	□□□□□ -0.63
STRN4-218	ENST00000600358	RBX1	P62877	108 aa		11.1	□□□□□ -0.63
STRN4-218	ENST00000600358	AMMECR1L	Q6DCA0	310 aa		11.1	□□□□□ -0.63
STRN4-218	ENST00000600358	TMEM101	Q96IK0	257 aa		11.1	□□□□□ -0.63
STRN4-218	ENST00000600358	IGLV4-3	A0A075B6K6	122 aa		11.09	□□□□□ -0.63
STRN4-218	ENST00000600358	LEPROTL1	O95214	131 aa		11.09	□□□□□ -0.63
STRN4-218	ENST00000600358	PAPPA-AS1	Q5QFB9	102 aa		11.09	□□□□□ -0.63
STRN4-218	ENST00000600358	OR5A1	Q8NGJ0	315 aa		11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms