RNA–Protein interactions for RNA: ENST00000598118.1

GRAMD1A-207, Transcript of GRAM domain containing 1A, humanhuman

TSL 1 (best)

Gene GRAMD1A, Length 2,277 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-207ENST00000598118 APOMO95445 188 aa14.25□□□□□ -0.13
GRAMD1A-207ENST00000598118 TNFRSF18Q9Y5U5 241 aa14.25□□□□□ -0.13
GRAMD1A-207ENST00000598118 TSPAN13O95857 204 aa14.24□□□□□ -0.13
GRAMD1A-207ENST00000598118 RAX2Q96IS3 184 aa14.24□□□□□ -0.13
GRAMD1A-207ENST00000598118 PRO0461Q9UI25 63 aa14.24□□□□□ -0.13
GRAMD1A-207ENST00000598118 FLNAP21333 2647 aaKnown RBP14.23□□□□□ -0.13
GRAMD1A-207ENST00000598118 LEPROTO15243 131 aa14.23□□□□□ -0.13
GRAMD1A-207ENST00000598118 SFTA2Q6UW10 78 aa14.23□□□□□ -0.13
GRAMD1A-207ENST00000598118 PYGO1Q9Y3Y4 419 aa14.23□□□□□ -0.13
GRAMD1A-207ENST00000598118 DNAJC9-AS1A6NH13 148 aa14.22□□□□□ -0.13
GRAMD1A-207ENST00000598118 ODF3L2Q3SX64 289 aa14.22□□□□□ -0.13
GRAMD1A-207ENST00000598118 RNASE13Q5GAN3 156 aaKnown RBP14.22□□□□□ -0.13
GRAMD1A-207ENST00000598118 NDUFA11Q86Y39 141 aa14.22□□□□□ -0.13
GRAMD1A-207ENST00000598118 PIK3CD-AS1Q5SR53 167 aa14.22□□□□□ -0.13
GRAMD1A-207ENST00000598118 A0A1W2PRX2 142 aa14.21□□□□□ -0.13
GRAMD1A-207ENST00000598118 AZU1P20160 251 aa14.21□□□□□ -0.13
GRAMD1A-207ENST00000598118 SH2D6Q7Z4S9 175 aa14.21□□□□□ -0.13
GRAMD1A-207ENST00000598118 CHCHD7Q9BUK0 85 aa14.21□□□□□ -0.13
GRAMD1A-207ENST00000598118 CFC1BP0CG36 223 aa14.21□□□□□ -0.14
GRAMD1A-207ENST00000598118 CFC1P0CG37 223 aa14.21□□□□□ -0.14
GRAMD1A-207ENST00000598118 GAGE13Q4V321 117 aa14.21□□□□□ -0.14
GRAMD1A-207ENST00000598118 TMEM86BQ8N661 226 aa14.21□□□□□ -0.14
GRAMD1A-207ENST00000598118 PTH2Q96A98 100 aa14.21□□□□□ -0.14
GRAMD1A-207ENST00000598118 ESM1Q9NQ30 184 aa14.21□□□□□ -0.14
GRAMD1A-207ENST00000598118 XCL2Q9UBD3 114 aa14.21□□□□□ -0.14
GRAMD1A-207ENST00000598118 INSP01308 110 aa14.2□□□□□ -0.14
GRAMD1A-207ENST00000598118 LINC00467Q9BRT7 94 aa14.2□□□□□ -0.14
GRAMD1A-207ENST00000598118 SETD2Q9BYW2 2564 aaPredicted RBP14.2□□□□□ -0.14
GRAMD1A-207ENST00000598118 ETDBQ3ZM63 59 aa14.2□□□□□ -0.14
GRAMD1A-207ENST00000598118 HIST2H2BCQ6DN03 193 aa14.2□□□□□ -0.14
GRAMD1A-207ENST00000598118 SPXQ9BT56 116 aa14.2□□□□□ -0.14
GRAMD1A-207ENST00000598118 BEAN1Q3B7T3 259 aa14.19□□□□□ -0.14
GRAMD1A-207ENST00000598118 NOTCH3Q9UM47 2321 aa14.19□□□□□ -0.14
GRAMD1A-207ENST00000598118 IGHV3-38A0A0C4DH36 116 aa14.18□□□□□ -0.14
GRAMD1A-207ENST00000598118 C10orf126Q8N4M7 172 aa14.18□□□□□ -0.14
GRAMD1A-207ENST00000598118 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.18□□□□□ -0.14
GRAMD1A-207ENST00000598118 IGKV2-29A2NJV5 120 aaPredicted RBP14.18□□□□□ -0.14
GRAMD1A-207ENST00000598118 IGHV3-53P01767 116 aa14.18□□□□□ -0.14
GRAMD1A-207ENST00000598118 MRPS36P82909 103 aaKnown RBP14.18□□□□□ -0.14
GRAMD1A-207ENST00000598118 LOC107984156A0A0G2JMH3 177 aa14.17□□□□□ -0.14
GRAMD1A-207ENST00000598118 UBE2D3P61077 147 aa14.17□□□□□ -0.14
GRAMD1A-207ENST00000598118 UBE2D2P62837 147 aa14.17□□□□□ -0.14
GRAMD1A-207ENST00000598118 ARL17AQ8IVW1 177 aa14.17□□□□□ -0.14
GRAMD1A-207ENST00000598118 UBE2D4Q9Y2X8 147 aa14.17□□□□□ -0.14
GRAMD1A-207ENST00000598118 ACANP16112 2415 aa14.17□□□□□ -0.14
GRAMD1A-207ENST00000598118 FHL3Q13643 280 aa14.17□□□□□ -0.14
GRAMD1A-207ENST00000598118 TRAV8-3A0A0A6YYJ7 113 aa14.16□□□□□ -0.14
GRAMD1A-207ENST00000598118 EIF4EBP3O60516 100 aaPredicted RBP14.16□□□□□ -0.14
GRAMD1A-207ENST00000598118 IGHV3-30-3P0DP02 117 aa14.16□□□□□ -0.14
GRAMD1A-207ENST00000598118 C1orf158Q8N1D5 194 aa14.16□□□□□ -0.14
GRAMD1A-207ENST00000598118 IGHV3OR16-12A0A075B7B8 117 aa14.16□□□□□ -0.14
GRAMD1A-207ENST00000598118 RS1O15537 224 aa14.16□□□□□ -0.14
GRAMD1A-207ENST00000598118 ADARB2-AS1A8MUL3 147 aa14.15□□□□□ -0.14
GRAMD1A-207ENST00000598118 CCL24O00175 119 aa14.15□□□□□ -0.14
GRAMD1A-207ENST00000598118 CRYBA4P53673 196 aa14.15□□□□□ -0.14
GRAMD1A-207ENST00000598118 CLUHP3Q96NS8 147 aa14.15□□□□□ -0.14
GRAMD1A-207ENST00000598118 A4D1N5 150 aa14.14□□□□□ -0.15
GRAMD1A-207ENST00000598118 PSMB2P49721 201 aa14.14□□□□□ -0.15
GRAMD1A-207ENST00000598118 SMCPP49901 116 aaPredicted RBP14.14□□□□□ -0.15
GRAMD1A-207ENST00000598118 STHQ8IWL8 128 aa14.14□□□□□ -0.15
GRAMD1A-207ENST00000598118 Q6ZUT4 128 aa14.13□□□□□ -0.15
GRAMD1A-207ENST00000598118 TRAV25A0A0B4J276 109 aa14.13□□□□□ -0.15
GRAMD1A-207ENST00000598118 A0A0J9YXY3 114 aa14.13□□□□□ -0.15
GRAMD1A-207ENST00000598118 MUSTN1Q8IVN3 82 aa14.13□□□□□ -0.15
GRAMD1A-207ENST00000598118 CITED2Q99967 270 aaPredicted RBP14.13□□□□□ -0.15
GRAMD1A-207ENST00000598118 TIMM21Q9BVV7 248 aa14.13□□□□□ -0.15
GRAMD1A-207ENST00000598118 SPANXA1Q9NS26 97 aa14.13□□□□□ -0.15
GRAMD1A-207ENST00000598118 JMJD1CQ15652 2540 aa14.13□□□□□ -0.15
GRAMD1A-207ENST00000598118 DNAJC30Q96LL9 226 aa14.12□□□□□ -0.15
GRAMD1A-207ENST00000598118 PRO1854Q9UHT4 67 aa14.12□□□□□ -0.15
GRAMD1A-207ENST00000598118 ANK3Q12955 4377 aaKnown RBP14.12□□□□□ -0.15
GRAMD1A-207ENST00000598118 TENM4Q6N022 2769 aa14.12□□□□□ -0.15
GRAMD1A-207ENST00000598118 A8MZ25 164 aa14.12□□□□□ -0.15
GRAMD1A-207ENST00000598118 INSL3P51460 131 aa14.12□□□□□ -0.15
GRAMD1A-207ENST00000598118 IL17DQ8TAD2 202 aa14.11□□□□□ -0.15
GRAMD1A-207ENST00000598118 TCL1BO95988 128 aa14.11□□□□□ -0.15
GRAMD1A-207ENST00000598118 COTL1Q14019 142 aa14.11□□□□□ -0.15
GRAMD1A-207ENST00000598118 MTORP42345 2549 aa14.1□□□□□ -0.15
GRAMD1A-207ENST00000598118 NIPBLQ6KC79 2804 aaeCLIP14.1□□□□□ -0.15
GRAMD1A-207ENST00000598118 IGHV1-58A0A0C4DH39 117 aa14.1□□□□□ -0.15
GRAMD1A-207ENST00000598118 TINCRA0A1B0GVN0 87 aa14.1□□□□□ -0.15
GRAMD1A-207ENST00000598118 LITAFQ99732 161 aa14.1□□□□□ -0.15
GRAMD1A-207ENST00000598118 KRTAP1-1Q07627 177 aa14.1□□□□□ -0.15
GRAMD1A-207ENST00000598118 PDZD2O15018 2839 aa14.09□□□□□ -0.15
GRAMD1A-207ENST00000598118 TRGV1A0A0A0MS02 117 aa14.09□□□□□ -0.15
GRAMD1A-207ENST00000598118 TMEM263Q8WUH6 116 aaKnown RBP14.09□□□□□ -0.15
GRAMD1A-207ENST00000598118 SETXQ7Z333 2677 aaKnown RBP14.09□□□□□ -0.15
GRAMD1A-207ENST00000598118 TMEM238C9JI98 176 aa14.08□□□□□ -0.15
GRAMD1A-207ENST00000598118 SPINK8P0C7L1 97 aa14.08□□□□□ -0.15
GRAMD1A-207ENST00000598118 TEX29Q8N6K0 151 aa14.07□□□□□ -0.16
GRAMD1A-207ENST00000598118 LINC01006Q8NI28 216 aa14.07□□□□□ -0.16
GRAMD1A-207ENST00000598118 ZNF418Q8TF45 676 aaPredicted RBP14.07□□□□□ -0.16
GRAMD1A-207ENST00000598118 VSIG2Q96IQ7 327 aa14.07□□□□□ -0.16
GRAMD1A-207ENST00000598118 TSSC4Q9Y5U2 329 aaPredicted RBP14.07□□□□□ -0.16
GRAMD1A-207ENST00000598118 IGHV3-33P01772 117 aa14.07□□□□□ -0.16
GRAMD1A-207ENST00000598118 Q6ZTI0 123 aa14.07□□□□□ -0.16
GRAMD1A-207ENST00000598118 ADAMTSL4-AS1Q5T5F5 129 aa14.06□□□□□ -0.16
GRAMD1A-207ENST00000598118 C2CD3Q4AC94 2353 aa14.06□□□□□ -0.16
GRAMD1A-207ENST00000598118 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.06□□□□□ -0.16
GRAMD1A-207ENST00000598118 NDUFA12Q9UI09 145 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms